prot_C-linearis_contig102.782.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig102.782.1
Unique Nameprot_C-linearis_contig102.782.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length942
Homology
BLAST of mRNA_C-linearis_contig102.782.1 vs. uniprot
Match: D7FH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH23_ECTSI)

HSP 1 Score: 463 bits (1192), Expect = 8.640e-145
Identity = 416/906 (45.92%), Postives = 482/906 (53.20%), Query Frame = 0
Query:    1 MEACNGFVWTAWLALVTLQATFCGSFMVPPQATTARPKCKPGRYSGPPAQRTTQQAAAVGGATAPLRRPNALVSPQPRRSIRASFVLPLAVASKNDASTSGDASGSGEQP--TGDRSSSREGDVATDEAPAAV---VQAETQRLMSVPTIDIKLELQMRGVEHRDAFEKVDLARRLVEARIS-CPSPPATAPSVP--------------GNDNDDARDRPGTKEPVNGTEGPTASVGGNEAGQESPVGEKDDKGRA---AGSAVYARDVAKATRMGKTAVSRELNVMGIAHSRLSDVSVLARLYANGRRQAREDAEEARRFPRAARAADSSADGGGAEGRAHGNGER-----------------EGWGEEGGSGDEDERWRNTREQWGRVASGLPRNGGKKRXXXXXXXXXXGWGASSTDVPFG----DEAGEGGSSETGWSVRANSGSAPSSSRGGGGGAISNQGRSRKASLHARADRMSSRELMKALDGLGAQYRIPAPRLELQDAFVSAVLA--EDARNQGDLGPRGEGERAE-IVPVSPYAATAGEEDGLDEEAMKKRSGAGFGTYHAALRWARQLNFDDVLEELEYRGVTHNSRADYSYLTRLLADEGLTGEELMEAEG-VEGAIWFCWVYTAELELAMAMSAQEIIRDVRAGGERVDVTQSKEALAQKLAEMNTRLRGESLPDSGSSDAFYRQRRP------------------KARGRAVAGASDDLLGHDGSGGHGEDVLLELEEAAKSVGGAALLVAKESAAFVSQTAAGLFSSVFPDEDGARESGSASVEXXXXXXXXXAGGGVVGDGARNAGQGRRARAARERAGGVGKAATGFAKSSVNRAGFAVAQSVANGALKGAEAAADWAGDGALALIRFGRITAQKLVSEGWKMEQQKR 840
            MEA N  VW AWLAL TL+A  CGSF++       R K +P   S   A     + +   G   PL RP   +   PR S  +S + PL+  + +D         +G++P      SS   G V T    AAV   V  ET+RLMS PTIDIKLELQMRGVEHRDAFEK DLARRL EAR+S C + P+ +P                 G D   A    G +E  + +   +  +G       +     + +G A     +  YARDVA+ TRMGK A++RELN MGIAHSRLSD+SVLAR YA  R++AREDA   RRFP                                          EGWG+  G                R ASGLP   GK+ XXXXXXX   G G    D P G    D+ GE G SETGWS RAN+GSA ++   GGG    ++ RSRKA LHARADRMSSRELMKALDGLGA+YRIPAPR ELQ AFVSAVLA  ED R+Q D      G R + IV VSPY     E DG        R   GFGTYH+ALRWARQLNFDDVL+EL YRGV  + RADYSYLTRLLADE L  EELM  EG  EGA      YTAELE AM+MSAQE+IRD+RAGGE  DVT SKEALA++LAEM  RLRGE LP SGSS +                         +ARG A      D LG                                                                XXXXXXX            +   + R+ RAAR+RAGGV +AATG+A+SSVNRAGFAV QS+ANG L+GAEAAADWAGDGALA   FGRI AQKLV EGWKME+ KR
Sbjct:    1 MEARN--VWVAWLALETLKAPLCGSFVLQQAPPPGRTKYEPAAGSRCSAATPRARCSCSRGLHDPLLRP---LLRSPRAS--SSAIAPLSGTADDDTLGRDGVGKAGDKPPAASSGSSHETGGVGTATGEAAVGTDVATETRRLMSEPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSSCGNNPSPSPDXXXXXXXXXXXXXXXAGRDFGGAA-ADGPRENAHRSNKASTMMGNEPQAAAATAVATEGRGAAPDGGSNRAYARDVARGTRMGKAALARELNGMGIAHSRLSDLSVLARQYAARRQEAREDA---RRFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGWGDARGQ---------------RAASGLPWRFGKEEXXXXXXXEAAGVG--DADFPLGGGGRDDVGEDGRSETGWSTRANAGSAATADGXGGG----DKERSRKAVLHARADRMSSRELMKALDGLGARYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAAAGTRGKNIVAVSPYDTPIEEGDG------GLRGTQGFGTYHSALRWARQLNFDDVLDELRYRGVEQSPRADYSYLTRLLADEVLADEELMGGEGGPEGAD----AYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLPHSGSSASXXXXXXXXXXXXXXXXXXXXXXXXXEARGPA------DPLGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXQETERSRQVRAARQRAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAR-EFGRIAAQKLVLEGWKMERAKR 851          
BLAST of mRNA_C-linearis_contig102.782.1 vs. uniprot
Match: A0A6H5JDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP5_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 3.140e-137
Identity = 412/896 (45.98%), Postives = 472/896 (52.68%), Query Frame = 0
Query:   15 LVTLQATFCGSFMVPPQATTARPKCKPGRYSGPPAQRTTQQA--AAVGGATAPLRRPNALVSPQPRRSIRASFVLPLAVASKNDASTSGDASGS-GEQPTG---DRSSSREGDVATDEAPAAV---VQAETQRLMSVPTIDIKLELQMRGVEHRDAFEKVDLARRLVEARISC----PSPPATAPSVPGNDNDDARDR------PGTKEPVNGTEGPTASVGGNEAGQESPVGEKDDKGRAA---GSAVYARDVAKATRMGKTAVSRELNVMGIAHSRLSDVSVLARLYANGRRQAREDAEEARRFPRAARAADSSADGGGAEGRAHGNGEREGWGEEGGSGDEDERWRNTREQWGRVASGLPRNGGKKRXXXXXXXXXXGWGASSTDVPFGDEAGEGGSSETGWSVRANSGSAPSSSRGGGGGAISNQGRSRKASLHARADRMSSRELMKALDGLGAQYRIPAPRLELQDAFVSAVLA--EDARNQGDLGPRGEGERAE-IVPVSPYAATAGEEDGLDEEAMKKRSGAGFGTYHAALRWARQLNFDDVLEELEYRGVTHNSRADYSYLTRLLADEGLTGEELMEAEG-VEGAIWFCWVYTAELELAMAMSAQEIIRDVRAGGERVDVTQSKEALAQKLAEMNTRLRGESLPDSGSSDAFYRQRRP-----------------KARGRAVAGASDDLLGHDGSGGHGEDVLLELEEAAKSVGGAALLVAKESAAFVSQTAAGLFSSVFPDEDGARESGSASVEXXXXXXXXXAGGGVVGDGARNAGQGRRARAARERAGGVGKAATGFAKSSVNRAGFAVAQSVANGALKGAEAAADWAGDGALA---------------------------LIRFGRITAQKLVSEGWKMEQQKR 840
            L+  QA  CGSF++    +  R K +    +GP       +A  + + G   PL RP   +   PR S  +S + PL+  + +D +  GD  G  G++P G   D  S   G V T    AAV   V  ET+RLMSVPTIDIKLELQMRGVEHRDAFEK DLARRL EAR+SC    PSP                         G +E  + +   + + G       +     + +G A+    S+ YARDVA+ TRMGK A++RELN MGIAHSRLSDVSVLAR YA  R++AREDA   RRFP +     S+ DG                                        S          XXXXXXXXXX                      TGWS RAN                  + RSRKA+LHARADR+SSRELMKALD LGAQYRIPAPR ELQ AFVSAVLA  ED R+Q D      G R E IVPVSPY A   E DG        R   GFGTYH+ALRWARQLNFDDVL+EL+YRGV H+ RADYSYLTRLLADE L  EELM  EG  EGA      YTAELE AM+MSAQE+IRD+RAGGE  DVT SKEALA++LAEM  RLRGE LP SGSS                             GR  A   D L   DG G    DVLLELEEAAKSVGG                                        XXXXXXXXX         A+   + R+ RAARERAGGV +AATG+A+SSVNRAGFAV QS+ANG L+GAEAAADWAGDGALA                           +IRFGRI AQKLV EGWKME+ KR
Sbjct:    4 LLGSQAPLCGSFVLQQAPSPGRTKYE--AAAGPRCSAAAPRARCSCLWGLHDPLLRP---LLRSPRAS--SSAIAPLSGTADDD-TIGGDGVGKPGDKPPGADSDFDSDETGGVGTATGRAAVSTDVATETRRLMSVPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSCCGNNPSPSHDXXXXXXXXXXXXXXXLGGAAAHGPRESAHRSNKASTTTGNEPQAAAATAVPTEGRGAASDGCSSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEAREDA---RRFPPS-----SALDG--------------------------------------SISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGWSTRANXXXXXXXXXXXXXXXXDME-RSRKAALHARADRLSSRELMKALDALGAQYRIPAPRAELQQAFVSAVLAAEEDERSQADATAAASGSRGENIVPVSPYDAPLEEGDG------GLRGTQGFGTYHSALRWARQLNFDDVLDELKYRGVEHSPRADYSYLTRLLADEVLADEELMGGEGGPEGAD----AYTAELEAAMSMSAQEMIRDLRAGGEIADVTLSKEALAERLAEMKLRLRGEPLPHSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXSTEGREPA---DPLGRRDGDG----DVLLELEEAAKSVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AQETERSRQVRAARERAGGVRRAATGYAQSSVNRAGFAVLQSLANGLLRGAEAAADWAGDGALAREYVLLFIAAFCLVFKRGVGAAVALLVVIRFGRIAAQKLVLEGWKMERAKR 826          
BLAST of mRNA_C-linearis_contig102.782.1 vs. uniprot
Match: A0A836CCS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS4_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 2.610e-8
Identity = 53/146 (36.30%), Postives = 65/146 (44.52%), Query Frame = 0
Query:  139 LMSVPTIDIKLELQMRGVEHRDAFEKVDLARRLVEARISCPSPP--ATAPSVPGNDNDDARDRPGTKEPVNGTEGPTASVGGNEAGQESPVGEKDDKGRAAGSAVYARDVAKATRMGKTAVSRELNVMGIAHSRLSDVSVLARLYA 282
            +M++PTIDIKLELQMRG++HRDA EK +LARRL +AR S   P   AT PS+                                                       R  AKA  MG+  + R L  MGI  S+L+D   LARLYA
Sbjct:   82 IMTMPTIDIKLELQMRGIDHRDALEKQELARRLAQARASQAQPVSVATDPSIE------------------------------------------------------RAAAKAMEMGEGGLRRALRDMGIPFSQLADAPELARLYA 173          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH23_ECTSI8.640e-14545.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDP5_9PHAE3.140e-13745.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCS4_9STRA2.610e-836.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 940..941
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..941
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.759
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig102contigC-linearis_contig102:265409..269722 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig102.782.1mRNA_C-linearis_contig102.782.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig102 265409..269750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig102.782.1 ID=prot_C-linearis_contig102.782.1|Name=mRNA_C-linearis_contig102.782.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=942bp
MEACNGFVWTAWLALVTLQATFCGSFMVPPQATTARPKCKPGRYSGPPAQ
RTTQQAAAVGGATAPLRRPNALVSPQPRRSIRASFVLPLAVASKNDASTS
GDASGSGEQPTGDRSSSREGDVATDEAPAAVVQAETQRLMSVPTIDIKLE
LQMRGVEHRDAFEKVDLARRLVEARISCPSPPATAPSVPGNDNDDARDRP
GTKEPVNGTEGPTASVGGNEAGQESPVGEKDDKGRAAGSAVYARDVAKAT
RMGKTAVSRELNVMGIAHSRLSDVSVLARLYANGRRQAREDAEEARRFPR
AARAADSSADGGGAEGRAHGNGEREGWGEEGGSGDEDERWRNTREQWGRV
ASGLPRNGGKKREDEDKEERGGGWGASSTDVPFGDEAGEGGSSETGWSVR
ANSGSAPSSSRGGGGGAISNQGRSRKASLHARADRMSSRELMKALDGLGA
QYRIPAPRLELQDAFVSAVLAEDARNQGDLGPRGEGERAEIVPVSPYAAT
AGEEDGLDEEAMKKRSGAGFGTYHAALRWARQLNFDDVLEELEYRGVTHN
SRADYSYLTRLLADEGLTGEELMEAEGVEGAIWFCWVYTAELELAMAMSA
QEIIRDVRAGGERVDVTQSKEALAQKLAEMNTRLRGESLPDSGSSDAFYR
QRRPKARGRAVAGASDDLLGHDGSGGHGEDVLLELEEAAKSVGGAALLVA
KESAAFVSQTAAGLFSSVFPDEDGARESGSASVEQQRRRRMRQAGGGVVG
DGARNAGQGRRARAARERAGGVGKAATGFAKSSVNRAGFAVAQSVANGAL
KGAEAAADWAGDGALALIRFGRITAQKLVSEGWKMEQQKRARAREGGGVA
AAAGGDSTSYRRDKSQVRHPGGAGGAATDRRPRRRKAVGTAKTEEKRRPR
VQKSTKKAKRNPAKSRRPKKAARKPLWDSESEDDGRGCVVM*
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