mRNA_C-linearis_contig101.753.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig101.753.1
Unique NamemRNA_C-linearis_contig101.753.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5K1S8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S8_9PHAE)

HSP 1 Score: 489 bits (1258), Expect = 1.900e-165
Identity = 248/359 (69.08%), Postives = 290/359 (80.78%), Query Frame = 1
Query:   91 FAPKLIHRWATHGHPGLPTLGMASTQRVESANSALKPVMSRSGTMLDVHRAIVGKVQDDANKTTSQNTGGVVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFC---HAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQHDASTSQVFKG 1158
            F+PK + RWA + HPGLPTLG++STQRVES N ALKP M+R+GTM+DVHRAI GKV DD NKT +Q TGG +QRVR+PT SSF  V+ SWL  F FV DGM  AGCSAFAMKDMSDEALAA+GY  ETLATGND+V RLL + VA P  AGLLY+   G  D TLATRTS++ FAELL D+VLD+LVRV+  +G +T+YC LVALGPDGFFLCTCLRIL++GL CRHALRAM   DLGFTGACI PRWRDG MPWT+GRLAAKP V +TT  G  GE+P PPA A AF    H+K+TVRAS WASCCA+GK+LATITA I+N+  I+R+L+NL   ARQLV+VELRSQH+AST++VFKG
Sbjct:  121 FSPKWVQRWAKYVHPGLPTLGISSTQRVESTNGALKPAMTRTGTMVDVHRAISGKVSDDVNKTKTQTTGGPIQRVRVPTQSSFGDVRDSWLADFKFVHDGMLHAGCSAFAMKDMSDEALAAVGYSAETLATGNDDVHRLLTDFVANPPQAGLLYETDVG--DVTLATRTSIEFFAELLKDQVLDRLVRVSRSFGDQTKYCQLVALGPDGFFLCTCLRILVDGLGCRHALRAMRGTDLGFTGACIAPRWRDGIMPWTMGRLAAKPAVAATTDAG--GEMPPPPADASAFSRFSHSKSTVRASAWASCCAWGKELATITAPIDNVAGITRILDNLTIHARQLVDVELRSQHNASTTRVFKG 475          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5KGZ7_9PHAE (MULE domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ7_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 1.240e-148
Identity = 234/356 (65.73%), Postives = 267/356 (75.00%), Query Frame = 1
Query:   91 FAPKLIHRWATHGHPGLPTLGMASTQRVESANSALKPVMSRSGTMLDVHRAIVGKVQDDANKTTSQNTGGVVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQHDASTSQVFKG 1158
            F PK +HRWA +GHPGLPTLG++STQRVESAN+ALKP MSRSGTM+DV+RAI GKV DD    T                                                DMSDEALAAMGYK ETLATGN +VQRLLA+LVA PAGAGLLY+ TSG  D TL TRTS+K FAELL D+VL++LVRVTN+ G++T +CHLVALGPDGFFL TCLRIL+EGL C HALR +H+ADLGFTGACI PRWRDG MPWT+  LAAKP VL+TT TGVPGE+P PPA    F H+K TVRAS WASCCAFGK+LATITAGI+NIP ISRVL+NL+NQARQ+VEVELRSQ++ASTS+VFKG
Sbjct:  186 FVPKWVHRWAMYGHPGLPTLGISSTQRVESANAALKPAMSRSGTMVDVNRAIRGKVTDDTKNDT------------------------------------------------DMSDEALAAMGYKAETLATGNCDVQRLLADLVANPAGAGLLYETTSG--DVTLTTRTSVKFFAELLRDQVLERLVRVTNV-GSQTNHCHLVALGPDGFFLYTCLRILVEGLGCGHALRTIHDADLGFTGACIAPRWRDGIMPWTMAPLAAKPAVLATTATGVPGEMPAPPADPGVFSHSKTTVRASAWASCCAFGKRLATITAGIDNIPGISRVLDNLKNQARQMVEVELRSQNNASTSRVFKG 490          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5JPJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ2_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 1.470e-136
Identity = 209/299 (69.90%), Postives = 240/299 (80.27%), Query Frame = 1
Query:  328 PSSFETVKASWLGQFDFVRDGMRQAGCSAFAMK-----------------------DMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQHDASTSQVFK 1155
            PSSFE VKA WLG FDFV+ GMR AGCSA+++                        DMSDEALAAMGYK ETLATGN +VQRLLA+LVA PAGAGLLY+ TSG  D TL TRTS+K FAELL D++L++LVRVTN+ G++T +CHLVALGPDGFFLCT LRIL+EGL  RHALRA+H+ADLGFTGACI PRWRDG MPWT+  LAAKP VL+TT TGVPGE+P PPA    F H+K TVRAS WASCCAFGK+LATITAGI+NIP ISRVL+NL+NQARQ+VEVELRSQH+A+TS+VFK
Sbjct:    3 PSSFEVVKARWLGSFDFVQTGMRDAGCSAYSLTVGLAFISLAMGGRFWCRSFQAFGDMSDEALAAMGYKAETLATGNCDVQRLLADLVANPAGAGLLYETTSG--DVTLTTRTSVKFFAELLRDQILERLVRVTNV-GSQTNHCHLVALGPDGFFLCTYLRILVEGLGYRHALRAIHDADLGFTGACIAPRWRDGIMPWTMAPLAAKPAVLATTATGVPGEMPAPPADPGVFSHSKTTVRASAWASCCAFGKELATITAGIDNIPGISRVLDNLKNQARQMVEVELRSQHNAATSRVFK 298          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5K2Y1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y1_9PHAE)

HSP 1 Score: 390 bits (1002), Expect = 7.720e-125
Identity = 217/374 (58.02%), Postives = 249/374 (66.58%), Query Frame = 1
Query:   37 FQAVAPGQPHVHLHGGHRFAPKLIHRWATHGHPGLPTLGMASTQRVESANSALKPVMSRSGTMLDVHRAIVGKVQDDANKTTSQNTGGVVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQHDASTSQVFKG 1158
            F  +APG           F PK +HRWA  GHPGLPTLG+ STQRVES NSALKP M RSGTM+DVHRAI  KVQ DANKTTS                                          A+AMKDMSDEALAAMGY   TLATGNDNVQRLLA+L A PAGAGLLY       D TL TRTS+K FAELL D+V+D+LVRVTN +G++TQYCHLVALGPDGFFLCTCLRI  +GL CRHALRA+ + D+GFTGA I  RWR                       G+PGE+P  PA    F  +KATVR+S WASCCAFGK+LA+IT+ I++IPAI+RVLENL+ QARQ+V+VELRSQH+ASTS+VFKG
Sbjct:  343 FNLLAPGSDMYTYMADSVFGPKWVHRWAKFGHPGLPTLGITSTQRVESTNSALKPAMQRSGTMVDVHRAISKKVQSDANKTTS------------------------------------------AYAMKDMSDEALAAMGYTAHTLATGNDNVQRLLADLGANPAGAGLLYGTGEEGADITLTTRTSIKFFAELLRDQVVDRLVRVTNTFGSQTQYCHLVALGPDGFFLCTCLRIPTDGLGCRHALRALKDGDVGFTGASIANRWR----------------------AGLPGELPAAPADPSVFTCSKATVRSSAWASCCAFGKELASITSTIDSIPAITRVLENLKIQARQMVDVELRSQHEASTSRVFKG 652          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5JI64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI64_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.900e-113
Identity = 186/321 (57.94%), Postives = 221/321 (68.85%), Query Frame = 1
Query:  160 STQRVESANSALKPVMSRSGTMLDVHRAIVGKVQDDANKTTSQNTGGVVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMY---GAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVE 1113
            STQRVES  + LK  M RSGT++DVH AIVGKV+DDA K+  Q  GG V RVR P  S+ +TV   WL  FDFVR+GMR A CSA AMKDMS EAL AMGYK   LA G+ NV+R LA +V+ PA AGL YD  SG  DGT  TRTS+K FA+LL  +V+D LVR+T  Y        YCHLVALGPDGF LCTCLR+L++GL CRH LRAM   D G  G C+ PRWRDGT PWT+  LAAK  V S +  G+PG VP  P    AF H+K T RAS WASC AFGK++A++   + ++    RVL+NL N A+QL+EVE
Sbjct:  248 STQRVESTINVLKMTMERSGTLVDVHDAIVGKVKDDATKSKRQADGGTVHRVRQPNASAVDTVTDGWLRGFDFVREGMRHAQCSAVAMKDMSTEALGAMGYKVHILARGDGNVRRELANMVSNPASAGLCYDPASGGGDGTWTTRTSVKFFADLLEGQVVDLLVRITRSYPDPDGGPDYCHLVALGPDGFVLCTCLRLLVDGLGCRHDLRAMRETDFGLNGGCLAPRWRDGTKPWTLAHLAAKRAVPSNSSAGLPGAVPPAPTDPGAFSHSKPTARASNWASCVAFGKEIASLMTEVNSVAPCQRVLDNLRNHAKQLIEVE 568          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5KFX3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX3_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 6.100e-105
Identity = 182/345 (52.75%), Postives = 220/345 (63.77%), Query Frame = 1
Query:  136 GLPTLGMASTQRVESANSALKPVMSRSGTMLDVHRAIVGKVQDD---ANKTTSQNTGGVVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYG-AETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQHDASTSQVFKG 1158
            G   L     +RVES N ALK  M RSG+M+DVH  IVGKVQ     A +T                 S  ETV  SWL  FD+VR  MR   CSA+AMKDMS EALAAM Y  E L TGN++V R +A +V+ PA AGL YD TSG  DGT  TRTS+K FAELL D+VLD+LVR+T  +      Y HLVALGPDGF LCTCLR+L+ GL CRH LRA+ + D GF G CI  RWRD T PWT+  LAAK    + T  GVPG++P  P     F H+K T R S WASC AFGK+LA++   ++ +    RVL NL N A+QL+EVE RSQH+A+T+++F G
Sbjct:  219 GTAALQTVMPKRVESINGALKTAMHRSGSMVDVHDTIVGKVQXPWLPACRTQQ-------------AASPLETVTNSWLEGFDYVRRAMRHVECSAYAMKDMSTEALAAMAYDVEILTTGNEDVHREIARIVSDPAIAGLSYDPTSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGFNGGCIASRWRDSTQPWTMEHLAAKRAAPANTAAGVPGDMPPAPTDPGVFSHSKPTARVSNWASCVAFGKELASLMTDVDAVAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTG 550          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 5.960e-93
Identity = 159/286 (55.59%), Postives = 192/286 (67.13%), Query Frame = 1
Query:  304 VQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYG-AETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQHDASTSQVFKG 1158
            +Q V     S  ETV  SWL  FD+VR  MR   CSA+AMKDMS EALAAM Y  E L TGND+V R +A +V+ PA AGL YD TSG  DGT  TRTS+K FAELL D+VLD+LVR+T  +      Y HLVALGPDGF LCTCLR+L+ GL CRH LRA+ + D G  G CI  RWRD T PWT+  L AK    + T  GVPG++P  P     F H+K T RAS WASC AFGK+LA++   ++ I    RVL NL N A+QL+EVE RSQH+A+T+++F G
Sbjct:  316 LQTVMPKAASPLETVTNSWLEGFDYVRRAMRHVECSAYAMKDMSTEALAAMAYDVEILGTGNDDVHREIARMVSDPAIAGLSYDPTSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHLVALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGLNGGCIASRWRDSTQPWTMEHLTAKRAAPANTAAGVPGDMPPAPMDPGVFSHSKPTARASNWASCVAFGKELASLMTDVDAIAPCQRVLNNLTNYAKQLIEVEARSQHEATTNRIFTG 601          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5KQR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR1_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 1.490e-86
Identity = 149/261 (57.09%), Postives = 163/261 (62.45%), Query Frame = 1
Query:  223 MLDVHRAIVGKVQDDANKTTSQNTGGVVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCA 1005
            M DVH AIVGKVQDDANK+  +   G VQRVR PT + FE  K  WLG FDFVR G R   CSAFAM DM  EALAAMGYK E LATGNDNVQR LA++V++PA AGL Y  TSG  DGT  TRTS        G                     HLVALGPDGF LCT LR+L++G  CRHALRAM   D GF G CI PRWRD T+PW +  LAAK  V   T  GVPGE+P  PA    F H+  T RAS WASC A
Sbjct:    1 MDDVHDAIVGKVQDDANKSKRKTARGAVQRVRQPTATPFERGKDRWLGDFDFVRQGTRHPKCSAFAMNDMPAEALAAMGYKAEILATGNDNVQRELAKMVSEPASAGLCYYPTSGGGDGTWTTRTSFSDGGPNCG---------------------HLVALGPDGFILCTRLRLLVDGPGCRHALRAMREMDFGFNGGCIAPRWRDSTLPWMMAALAAKRAVPENTVAGVPGEMPPAPADPGVFSHSNPTARASNWASCVA 240          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5KQ14_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ14_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 8.800e-83
Identity = 162/364 (44.51%), Postives = 225/364 (61.81%), Query Frame = 1
Query:   91 FAPKLIHRWATHGHPGLPTLGMASTQRVESANSALKPVMSRSGTMLDVHRAIVGKVQDDANKTTSQNTGGVVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGR-VDG----------TLATRTSMKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAM-----HNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGT---GVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQ 1125
            F    + +WA+  HPGL  LG+ASTQR E+  +ALK V++R+G M+D++RA++ KVQDDA KT S+N GG V RV +   S  E+VKAS+L  F FV + M    CS  A +D+ ++  AA GY+  T+ATG D V+ LLAELVA P  A L YD  SG  +D           T+ATRTS+  FA+LL D+ +++LVR+T ++ A++++ HLVALGPDGFFLCTCLR+L+ GL C H ++A+     ++    F  ACI PRWRD    WT+  LAAKP  L+T      G+P   P     + +     ATV A+G+A   ++GK++     GI +   I RVLE+  +   Q +EVE RSQ
Sbjct:  183 FGAGRVEKWASCVHPGLHKLGIASTQRCEATFTALKLVVTRNGNMVDLNRALLSKVQDDAIKTQSRNKGGAVTRVPVRKVSPQESVKASFLRHFSFVFEAMEHERCSRHAKEDVEEQIFAAFGYEAVTVATGQDAVRTLLAELVADPTKANLAYDICSGEFIDPGGEAAGPAHVTMATRTSVAHFADLLHDQNVEELVRIT-IFNAQSEFGHLVALGPDGFFLCTCLRMLVYGLPCPHCIKALAHMRGNDKVFSFNAACISPRWRDSETSWTMAHLAAKPARLATADAELAGLPVIDPNSVVVSYSSATVAATVAAAGYADAVSYGKKMGGKLRGITSSAGIQRVLESTYDFFLQQLEVEKRSQ 545          
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Match: A0A6H5L517_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L517_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 3.610e-77
Identity = 142/243 (58.44%), Postives = 164/243 (67.49%), Query Frame = 1
Query:  430 MSDEALAAMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTSMKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILIEGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTTGTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENIPAISRVLENLENQARQLVEVELRSQHDASTSQVFKG 1158
            MSDEALAAMGYK ETLATG                             D TL TRTS+K FAELL D+VL++LVRVTN+ G++T +CHLVALGPDGFFL TCLRIL+EGL  RHALRA+ +ADLGFTGACI PRWRDG MPWT+  LAAKP VL+TT TGVPGE+P PPA                               +GI+NIP ISRVL+NL+NQARQ+VEVELRSQ++ASTS+VFKG
Sbjct:    1 MSDEALAAMGYKAETLATG-----------------------------DVTLTTRTSVKFFAELLRDQVLERLVRVTNV-GSQTNHCHLVALGPDGFFLYTCLRILVEGLGFRHALRAILDADLGFTGACIAPRWRDGIMPWTMAPLAAKPAVLATTATGVPGEMPAPPA------------------------------DSGIDNIPGISRVLDNLKNQARQMVEVELRSQNNASTSRVFKG 183          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig101.753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1S8_9PHAE1.900e-16569.08SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KGZ7_9PHAE1.240e-14865.73MULE domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5JPJ2_9PHAE1.470e-13669.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2Y1_9PHAE7.720e-12558.02SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JI64_9PHAE1.900e-11357.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFX3_9PHAE6.100e-10552.75SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYV9_9PHAE5.960e-9355.59SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KQR1_9PHAE1.490e-8657.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ14_9PHAE8.800e-8344.51SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L517_9PHAE3.610e-7758.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig101contigC-linearis_contig101:499578..501926 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.5
Seed ortholog evalue5.7e-17
Seed eggNOG ortholog2880.D7FLF6
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMGX@1,2QQB8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1159
Cds size1158
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig101.753.1prot_C-linearis_contig101.753.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig101 499578..501926 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927365.4557235-CDS-C-linearis_contig101:499577..5003091622927365.4557235-CDS-C-linearis_contig101:499577..500309Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 499578..500309 -
1690879655.4809625-CDS-C-linearis_contig101:499577..5003091690879655.4809625-CDS-C-linearis_contig101:499577..500309Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 499578..500309 -
1622927365.4675698-CDS-C-linearis_contig101:500569..5007111622927365.4675698-CDS-C-linearis_contig101:500569..500711Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 500570..500711 -
1690879655.493806-CDS-C-linearis_contig101:500569..5007111690879655.493806-CDS-C-linearis_contig101:500569..500711Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 500570..500711 -
1622927365.4803963-CDS-C-linearis_contig101:501293..5014761622927365.4803963-CDS-C-linearis_contig101:501293..501476Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 501294..501476 -
1690879655.5065742-CDS-C-linearis_contig101:501293..5014761690879655.5065742-CDS-C-linearis_contig101:501293..501476Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 501294..501476 -
1622927365.4907677-CDS-C-linearis_contig101:501825..5019261622927365.4907677-CDS-C-linearis_contig101:501825..501926Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 501826..501926 -
1690879655.5200992-CDS-C-linearis_contig101:501825..5019261690879655.5200992-CDS-C-linearis_contig101:501825..501926Chordaria linearis ClinC8C monoicousCDSC-linearis_contig101 501826..501926 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig101.753.1

>prot_C-linearis_contig101.753.1 ID=prot_C-linearis_contig101.753.1|Name=mRNA_C-linearis_contig101.753.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=386bp
GVADVPSAQTGPFQAVAPGQPHVHLHGGHRFAPKLIHRWATHGHPGLPTL
GMASTQRVESANSALKPVMSRSGTMLDVHRAIVGKVQDDANKTTSQNTGG
VVQRVRLPTPSSFETVKASWLGQFDFVRDGMRQAGCSAFAMKDMSDEALA
AMGYKPETLATGNDNVQRLLAELVAKPAGAGLLYDATSGRVDGTLATRTS
MKIFAELLGDEVLDQLVRVTNMYGAETQYCHLVALGPDGFFLCTCLRILI
EGLCCRHALRAMHNADLGFTGACIGPRWRDGTMPWTVGRLAAKPEVLSTT
GTGVPGEVPLPPAAARAFCHAKATVRASGWASCCAFGKQLATITAGIENI
PAISRVLENLENQARQLVEVELRSQHDASTSQVFKG
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mRNA from alignment at C-linearis_contig101:499578..501926-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig101.753.1 ID=mRNA_C-linearis_contig101.753.1|Name=mRNA_C-linearis_contig101.753.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2349bp|location=Sequence derived from alignment at C-linearis_contig101:499578..501926- (Chordaria linearis ClinC8C monoicous)
GGTGTCGCAGATGTTCCTTCAGCACAAACAGGACCTTTTCAAGCTGTTGC GCCCGGACAGCCACATGTACACCTACATGGCGGACACCGTTTTGCCCCCA AGTAAGCACCACTATCTGGCATGGCAGAAGCCGAGTAGGGATTGCGCAGA CAAGCAGTAATCTCCTTCGGGCTACACCGGGATTCGCATTGCGCGTCGGA GGCTGCCTTGTTGGGCTGTGGTTGGGTCAGGGTTAGGATCAATCTGTTTC CAGCTTTTCTGTGCGTTCGCCCCGGCGCCCGGGAGATAGATCCGTGGCCG GGGGGGGGGGCATGAGTTTGTATTTTACTCAGGTTGCGCGAGTCGTCATC CAGCTCCTCCTCCTCCTCGTCTGGAGGTGTCCCGCAATTGTTAGCGCCAC CCGCTCTTCCTGTGCCCACTAAATTCGAGCCGTCCCGGCGCATGTGACAG GCTCATACACCGGTGGGCGACGCACGGGCACCCTGGCCTCCCTACGCTCG GCATGGCCTCCACGCAGCGAGTGGAATCTGCCAACTCCGCTTTGAAGCCG GTGATGAGCAGGTCGGGGACTATGCTCGATGTACACCGGGCCATCGTAGG CAAAGTCCAAGACGACGCCAACAAAACGACAAGGTGGGCGGCTGTTGAAC CTCTGGAGTATTGTTTGAAGACATTGTTTGCATTGCGTAATATCGACGTC AGGGACAAATTGAAGTAGGAGATAGTTGGTGCCTGCCGAAAGACAATCTC TCCCACCATTCCTCTTGTTTCTTATTTTTGGCGACCTTATTTTTATTTTT CCCTTTATTAAATGTGGACTGCCAGTGCTCTGGCAAGCCGGGGGTAAGAA TATATAGCCAAAAGTAGGAATAAATCGGGAATATATCATGGGCCCATCAT ATCACAATTTCATTTCCTCGTATCCTGTCTGCGTTGTATTACGAGGGGGA GGATTCGATTTGTTCATTTCGCTGGCTGGCATTGTACAAGTACCAAGACG TTCCATTCTTATTTTGTTCGTCACATAGCGTGCAGGAGGGAGCGGAAGGC TCCACACTTTTTTGTTTCGGTTGTGTATCGCTTTGCGGACCCTCGCTTGC AATGTCATGATGTCACCCACAGAATTTTAACATTAGCGTGCCTGTGCCAC TTACGTGTTGCTCTAACCCGTACTTTCACCTTCGACCCGCGTGCTTTTTA CTGTGCTATTTCAAGCCAAAACACAGGGGGGGTGGTCCAACGCGTGCGTC TCCCAACTCCATCCAGCTTTGAGACAGTGAAGGCCAGCTGGCTCGGACAG TTCGACTTCGTCCGCGACGGTATGCGCCAGGCGGGCTGCAGCGCGTTCGC TATGAAGGTGAGGTTAGCCTTCATAGCTCTACCAATGGGTGAACCTTTGG TGTATCGCTCCTTCCTCGCCTGTGGCCTTTGGGGTATGGCACCCTGGATC CCCCCCTCGTCGCGTGACACTGCTGTCGGATACTTACATATGCACGGCGC CAACGATGGCACTTTTAGGCGAACATGGGTGAAGCCTCCACAAATGCCAG CCATTAATCGCCCCCCCTCTTCTCCTCCGTGCAACCCGGCTTTCGCTTCG TCCTTCCGTTCCGGCAGGACATGTCCGACGAGGCCTTGGCGGCTATGGGT TACAAGCCCGAGACCCTCGCGACGGGTAACGACAATGTTCAACGCCTACT GGCCGAGTTGGTGGCGAAACCGGCTGGAGCGGGACTGCTTTACGACGCCA CCTCTGGCAGAGTCGATGGCACCCTCGCCACCCGGACGTCCATGAAAATT TTCGCGGAGCTGCTGGGAGACGAGGTTCTCGACCAGCTGGTGCGCGTCAC CAACATGTATGGTGCCGAAACCCAGTACTGTCACCTCGTCGCGCTCGGAC CCGATGGCTTCTTCCTGTGCACGTGCCTGAGGATCCTCATCGAAGGTCTC TGCTGCCGGCATGCTCTCCGGGCCATGCACAACGCGGATCTCGGCTTCAC CGGAGCATGCATTGGACCCCGCTGGCGTGACGGCACTATGCCGTGGACGG TCGGACGGCTCGCCGCTAAGCCTGAGGTGCTATCGACGACAGGTACGGGG GTTCCGGGGGAGGTACCGCTCCCACCTGCGGCCGCCCGCGCTTTCTGCCA CGCCAAAGCGACGGTGAGAGCCAGCGGGTGGGCCAGTTGCTGCGCCTTCG GGAAGCAGCTCGCAACCATCACAGCAGGCATCGAGAACATCCCCGCCATC TCACGCGTCCTGGAGAACCTCGAGAACCAAGCGCGCCAGCTCGTCGAGGT GGAGTTGAGGTCGCAACACGACGCCTCCACGAGCCAGGTGTTCAAGGGA
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Coding sequence (CDS) from alignment at C-linearis_contig101:499578..501926-

>mRNA_C-linearis_contig101.753.1 ID=mRNA_C-linearis_contig101.753.1|Name=mRNA_C-linearis_contig101.753.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2316bp|location=Sequence derived from alignment at C-linearis_contig101:499578..501926- (Chordaria linearis ClinC8C monoicous)
GGTGTCGCAGATGTTCCTTCAGCACAAACAGGACCTTTTCAAGCTGTTGC
GCCCGGACAGCCACATGTACACCTACATGGCGGACACCGTTTTGCCCCCA
AGGTGTCGCAGATGTTCCTTCAGCACAAACAGGACCTTTTCAAGCTGTTG
CGCCCGGACAGCCACATGTACACCTACATGGCGGACACCGTTTTGCCCCC
AAGCTCATACACCGGTGGGCGACGCACGGGCACCCTGGCCTCCCTACGCT
CGGCATGGCCTCCACGCAGCGAGTGGAATCTGCCAACTCCGCTTTGAAGC
CGGTGATGAGCAGGTCGGGGACTATGCTCGATGTACACCGGGCCATCGTA
GGCAAAGTCCAAGACGACGCCAACAAAACGACAAGGCTCATACACCGGTG
GGCGACGCACGGGCACCCTGGCCTCCCTACGCTCGGCATGGCCTCCACGC
AGCGAGTGGAATCTGCCAACTCCGCTTTGAAGCCGGTGATGAGCAGGTCG
GGGACTATGCTCGATGTACACCGGGCCATCGTAGGCAAAGTCCAAGACGA
CGCCAACAAAACGACAAGCCAAAACACAGGGGGGGTGGTCCAACGCGTGC
GTCTCCCAACTCCATCCAGCTTTGAGACAGTGAAGGCCAGCTGGCTCGGA
CAGTTCGACTTCGTCCGCGACGGTATGCGCCAGGCGGGCTGCAGCGCGTT
CGCTATGAAGCCAAAACACAGGGGGGGTGGTCCAACGCGTGCGTCTCCCA
ACTCCATCCAGCTTTGAGACAGTGAAGGCCAGCTGGCTCGGACAGTTCGA
CTTCGTCCGCGACGGTATGCGCCAGGCGGGCTGCAGCGCGTTCGCTATGA
AGGACATGTCCGACGAGGCCTTGGCGGCTATGGGTTACAAGCCCGAGACC
CTCGCGACGGGTAACGACAATGTTCAACGCCTACTGGCCGAGTTGGTGGC
GAAACCGGCTGGAGCGGGACTGCTTTACGACGCCACCTCTGGCAGAGTCG
ATGGCACCCTCGCCACCCGGACGTCCATGAAAATTTTCGCGGAGCTGCTG
GGAGACGAGGTTCTCGACCAGCTGGTGCGCGTCACCAACATGTATGGTGC
CGAAACCCAGTACTGTCACCTCGTCGCGCTCGGACCCGATGGCTTCTTCC
TGTGCACGTGCCTGAGGATCCTCATCGAAGGTCTCTGCTGCCGGCATGCT
CTCCGGGCCATGCACAACGCGGATCTCGGCTTCACCGGAGCATGCATTGG
ACCCCGCTGGCGTGACGGCACTATGCCGTGGACGGTCGGACGGCTCGCCG
CTAAGCCTGAGGTGCTATCGACGACAGGTACGGGGGTTCCGGGGGAGGTA
CCGCTCCCACCTGCGGCCGCCCGCGCTTTCTGCCACGCCAAAGCGACGGT
GAGAGCCAGCGGGTGGGCCAGTTGCTGCGCCTTCGGGAAGCAGCTCGCAA
CCATCACAGCAGGCATCGAGAACATCCCCGCCATCTCACGCGTCCTGGAG
AACCTCGAGAACCAAGCGCGCCAGCTCGTCGAGGTGGAGTTGAGGTCGCA
ACACGACGCCTCCACGAGCCAGGTGTTCAAGGGAGACATGTCCGACGAGG
CCTTGGCGGCTATGGGTTACAAGCCCGAGACCCTCGCGACGGGTAACGAC
AATGTTCAACGCCTACTGGCCGAGTTGGTGGCGAAACCGGCTGGAGCGGG
ACTGCTTTACGACGCCACCTCTGGCAGAGTCGATGGCACCCTCGCCACCC
GGACGTCCATGAAAATTTTCGCGGAGCTGCTGGGAGACGAGGTTCTCGAC
CAGCTGGTGCGCGTCACCAACATGTATGGTGCCGAAACCCAGTACTGTCA
CCTCGTCGCGCTCGGACCCGATGGCTTCTTCCTGTGCACGTGCCTGAGGA
TCCTCATCGAAGGTCTCTGCTGCCGGCATGCTCTCCGGGCCATGCACAAC
GCGGATCTCGGCTTCACCGGAGCATGCATTGGACCCCGCTGGCGTGACGG
CACTATGCCGTGGACGGTCGGACGGCTCGCCGCTAAGCCTGAGGTGCTAT
CGACGACAGGTACGGGGGTTCCGGGGGAGGTACCGCTCCCACCTGCGGCC
GCCCGCGCTTTCTGCCACGCCAAAGCGACGGTGAGAGCCAGCGGGTGGGC
CAGTTGCTGCGCCTTCGGGAAGCAGCTCGCAACCATCACAGCAGGCATCG
AGAACATCCCCGCCATCTCACGCGTCCTGGAGAACCTCGAGAACCAAGCG
CGCCAGCTCGTCGAGGTGGAGTTGAGGTCGCAACACGACGCCTCCACGAG
CCAGGTGTTCAAGGGA
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