prot_C-linearis_contig101.709.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig101.709.1
Unique Name	prot_C-linearis_contig101.709.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	216

Homology

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: D7FIE9_ECTSI (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE9_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 1.580e-99
Identity = 142/194 (73.20%), Postives = 158/194 (81.44%), Query Frame = 0

Query:   30 GRVSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAGTGEDQGPSHGLTAGLVRSISRRLRRKKKV---------EEPPATAPSSA 214
            G VSASG+DVTR  + T+QLA++R LSIKQRYVV GGTEPPFSGRF+NGV+Y+TKRRGTFNC VCDLPAY+SSSKF SGTGWPSFYE IDPDHVWETTD+S GMVRKEVKC RCHAHQGHVFNDGP+PTGKRYCVNAASLTFKA  GE Q PSHG+ AG V  +SR LR + K          EE P+  P+ A
Sbjct:   17 GAVSASGYDVTRRKKGTAQLARERALSIKQRYVVSGGTEPPFSGRFSNGVRYSTKRRGTFNCAVCDLPAYSSSSKFNSGTGWPSFYETIDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFKAAHGEGQVPSHGIAAGFVDMLSRHLRIRTKNKGGKEGAEGEEEPSARPTVA 210

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: A0A6H5JXE9_9PHAE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE9_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 6.760e-94
Identity = 130/173 (75.14%), Postives = 149/173 (86.13%), Query Frame = 0

Query:   30 GRVSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAGTGEDQGPSHGLTAGLVRSISRRLRRKKK 202
            G VSASG+DVTR  + T+QLA++R LS+KQRYVV GGTEPPFSGRF+NGV+Y+TKRRGTF+C VCDLPAY+SSSKF SGTGWPSFYE +DPDHVWETTD+S GMVRKEVKC RCHAHQGHVFNDGP+PTGKRYCVNAASLTFKA   +D+ PS G+  G V  +SR LR + K
Sbjct:   16 GTVSASGYDVTRRKKSTAQLARERSLSVKQRYVVSGGTEPPFSGRFSNGVRYSTKRRGTFDCAVCDLPAYSSSSKFNSGTGWPSFYETVDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFKAAHAQDRVPSGGI--GFVDMLSRHLRMRTK 186

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: Q0VPB9_ALCBS (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) TaxID=393595 RepID=Q0VPB9_ALCBS)

HSP 1 Score: 169 bits (428), Expect = 2.220e-50
Identity = 77/143 (53.85%), Postives = 107/143 (74.83%), Query Frame = 0

Query:   32 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVV-GGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 173
            +SASG D+T L++   Q A+ + L+ ++R+++   GTEPPF G   +      K  GT++C +CDLP +AS +KF+SGTGWPSFY+P DP+H+ E +D SHGM+R E++C RC +HQGHVF DGP PTG+RYC+N+ASLTFKA
Sbjct:    5 LSASGFDLTPLSEEEKQ-ARAQTLTEEERHILLNQGTEPPFCGGLLDN-----KDAGTYHCKLCDLPLFASDAKFESGTGWPSFYQPYDPEHIRELSDRSHGMLRVEIRCARCDSHQGHVFPDGPPPTGQRYCLNSASLTFKA 141

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: B4X305_9GAMM (Peptide methionine sulfoxide reductase MsrB n=5 Tax=unclassified Alcanivorax TaxID=2638842 RepID=B4X305_9GAMM)

HSP 1 Score: 168 bits (426), Expect = 4.740e-50
Identity = 79/143 (55.24%), Postives = 102/143 (71.33%), Query Frame = 0

Query:   32 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVV-GGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 173
            +SASG D+T L++   Q A+ R LS ++R ++   GTEPPF G   +      K  GT++C +CDLP + SS+KF+SGTGWPSFYEP DP H+ E  D SHGMVR E++C RC  HQGHVF DGP PTG+RYC+N+AS+ FKA
Sbjct:    5 LSASGFDLTPLSEEEKQ-ARARSLSEEERRILLNQGTEPPFCGGLLDN-----KDDGTYHCKLCDLPLFTSSAKFESGTGWPSFYEPFDPQHIRELHDSSHGMVRVEIRCARCDGHQGHVFPDGPPPTGQRYCLNSASMVFKA 141

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: A0A2E9TLR4_9GAMM (Peptide methionine sulfoxide reductase MsrB n=6 Tax=Alcanivorax TaxID=59753 RepID=A0A2E9TLR4_9GAMM)

HSP 1 Score: 166 bits (420), Expect = 3.730e-49
Identity = 72/141 (51.06%), Postives = 97/141 (68.79%), Query Frame = 0

Query:   33 SASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 173
            SASGHD+T L+    Q   +   + ++R ++  GTEPPF G   +      K  G ++C +C+LP +A+S+KF+SGTGWPSFY+P DP+H+ E  D SHGMVR E++C RC  H GHVF DGP PTG RYC+N+AS+ FKA
Sbjct:    6 SASGHDLTPLSDTEKQQRAESLTAEERRILLNQGTEPPFCGGLLDN-----KENGVYHCKLCELPLFAASAKFESGTGWPSFYQPFDPEHIRELRDTSHGMVRVEIRCARCDGHLGHVFPDGPPPTGLRYCLNSASMVFKA 141

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: A0A7G2S6Q2_9GAMM (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Alcanivorax sp. TaxID=1872427 RepID=A0A7G2S6Q2_9GAMM)

HSP 1 Score: 163 bits (412), Expect = 6.260e-48
Identity = 70/143 (48.95%), Postives = 96/143 (67.13%), Query Frame = 0

Query:   33 SASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAGT 175
            SASGHD+T L+    Q   +     ++R ++  GTEPPF G   +      +  G ++C +CDLP +++++KF+SGTGWPSFY+P DP+H+ E  D SHGM R E++C RC  H GHVF DGP PTG RYC+N+AS+ FKA T
Sbjct:    6 SASGHDLTPLSDAEKQQRAEHLTDEEKRILLNQGTEPPFCGGLLDN-----REDGAYHCKLCDLPLFSANAKFESGTGWPSFYQPFDPEHIRELHDTSHGMTRVEIRCARCDGHLGHVFPDGPPPTGLRYCLNSASMVFKAST 143

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: UPI001D1954BC (peptide-methionine (R)-S-oxide reductase MsrB n=3 Tax=Alcanivorax TaxID=59753 RepID=UPI001D1954BC)

HSP 1 Score: 162 bits (410), Expect = 1.180e-47
Identity = 74/143 (51.75%), Postives = 93/143 (65.03%), Query Frame = 0

Query:   32 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKAG 174
             SASGHD+T L     Q       + ++R ++  GTEPPF G   +      K  GT+ C +C LP + S  KF+SGTGWPSFY+P+DP+HV E  D SHGMVR E++C RC  H GHVF DGP PTG RYC+N+ASL F+AG
Sbjct:    3 TSASGHDLTPLTDAEKQQRAAGLTAEERRILLNQGTEPPFCGGLLDN-----KESGTYLCKLCHLPLFRSDEKFESGTGWPSFYQPVDPEHVKELRDDSHGMVRTEIRCARCDGHLGHVFPDGPPPTGLRYCLNSASLVFEAG 140

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: A0A2E5TEI8_9GAMM (Peptide methionine sulfoxide reductase MsrB n=7 Tax=Alcanivorax TaxID=59753 RepID=A0A2E5TEI8_9GAMM)

HSP 1 Score: 159 bits (402), Expect = 1.860e-46
Identity = 72/141 (51.06%), Postives = 90/141 (63.83%), Query Frame = 0

Query:   32 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFK 172
             SASGHD+T L     Q       + ++R ++  GTEPPF G   +      K  GT+ C +C LP + S  KF+SGTGWPSF+ P DPDHV E  D SHGMVR E++C RC  H GHVF DGP PTG+RYC+N+ASL F+
Sbjct:    3 TSASGHDLTPLTDAEKQQRAADLTTEERRILLNQGTEPPFCGGLLDN-----KEAGTYACKLCHLPLFRSDDKFESGTGWPSFFRPADPDHVRELQDASHGMVRTEIRCARCDGHLGHVFPDGPPPTGQRYCLNSASLVFQ 138

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: UPI001FF4BA14 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Alcanivorax sp. S6407 TaxID=2926424 RepID=UPI001FF4BA14)

HSP 1 Score: 159 bits (402), Expect = 1.920e-46
Identity = 71/142 (50.00%), Postives = 93/142 (65.49%), Query Frame = 0

Query:   32 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 173
             SASG+D+T L++   Q         ++R ++  GTEPPF G   +      K  G ++C +CDLP ++S SKF+SGTGWPSFY P D +H+ E  D SHGMVR E++C RC  H GHVF DGP PTG RYC+N+AS+ FKA
Sbjct:    5 TSASGYDLTPLSEADKQQKAANLTEEERRILLNQGTEPPFCGGLLDN-----KDSGVYHCKLCDLPLFSSDSKFESGTGWPSFYAPFDSEHIRELRDTSHGMVRVEIRCARCDGHLGHVFPDGPAPTGLRYCLNSASMVFKA 141

[Close]

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Match: A0A095SP60_9GAMM (Peptide methionine sulfoxide reductase MsrB n=5 Tax=Alcanivoracaceae TaxID=224372 RepID=A0A095SP60_9GAMM)

HSP 1 Score: 158 bits (400), Expect = 3.620e-46
Identity = 71/142 (50.00%), Postives = 94/142 (66.20%), Query Frame = 0

Query:   32 VSASGHDVTRLAQPTSQLAKDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYASSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHVFNDGPQPTGKRYCVNAASLTFKA 173
             S+SG+D+T L+    Q         ++R ++  GTEPPF G   +      K  G ++C +CDLP + S+SKF+SGTGWPSFYEP D  H+ E  D SHGMVR E++C RC  H GHVF DGP PTG+RYC+N+AS+TFK+
Sbjct:    3 TSSSGYDLTPLSDAEKQQNAANLSEEERRILLNQGTEPPFCGGLLDN-----KEDGIYHCKLCDLPLFNSTSKFESGTGWPSFYEPFDSAHIRELRDTSHGMVRVEIRCARCDGHLGHVFPDGPPPTGQRYCLNSASMTFKS 139

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot

BLAST of mRNA_C-linearis_contig101.709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FIE9_ECTSI	1.580e-99	73.20	Peptide-methionine (R)-S-oxide reductase n=1 Tax=E...	[more]
A0A6H5JXE9_9PHAE	6.760e-94	75.14	Peptide-methionine (R)-S-oxide reductase n=1 Tax=E...	[more]
Q0VPB9_ALCBS	2.220e-50	53.85	Peptide-methionine (R)-S-oxide reductase n=1 Tax=A...	[more]
B4X305_9GAMM	4.740e-50	55.24	Peptide methionine sulfoxide reductase MsrB n=5 Ta...	[more]
A0A2E9TLR4_9GAMM	3.730e-49	51.06	Peptide methionine sulfoxide reductase MsrB n=6 Ta...	[more]
A0A7G2S6Q2_9GAMM	6.260e-48	48.95	Peptide methionine sulfoxide reductase MsrB n=1 Ta...	[more]
UPI001D1954BC	1.180e-47	51.75	peptide-methionine (R)-S-oxide reductase MsrB n=3 ...	[more]
A0A2E5TEI8_9GAMM	1.860e-46	51.06	Peptide methionine sulfoxide reductase MsrB n=7 Ta...	[more]
UPI001FF4BA14	1.920e-46	50.00	peptide-methionine (R)-S-oxide reductase MsrB n=1 ...	[more]
A0A095SP60_9GAMM	3.620e-46	50.00	Peptide methionine sulfoxide reductase MsrB n=5 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002579	Peptide methionine sulphoxide reductase MrsB	TIGRFAM	TIGR00357	TIGR00357	coord: 53..173 e-value: 1.7E-42 score: 142.6
IPR002579	Peptide methionine sulphoxide reductase MrsB	PFAM	PF01641	SelR	coord: 54..172 e-value: 8.2E-41 score: 138.9
IPR002579	Peptide methionine sulphoxide reductase MrsB	PROSITE	PS51790	MSRB	coord: 48..174 score: 51.606
None	No IPR available	GENE3D	2.170.150.20		coord: 45..185 e-value: 8.8E-47 score: 160.0
None	No IPR available	PANTHER	PTHR10173:SF52	METHIONINE-R-SULFOXIDE REDUCTASE B3	coord: 17..174
IPR028427	Peptide methionine sulfoxide reductase	PANTHER	PTHR10173	METHIONINE SULFOXIDE REDUCTASE	coord: 17..174
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 59..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig101	contig	C-linearis_contig101:31663..33593 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig101.709.1	mRNA_C-linearis_contig101.709.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig101 30932..33659 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig101.709.1 ID=prot_C-linearis_contig101.709.1|Name=mRNA_C-linearis_contig101.709.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=216bp
MSTNTRRHTRREPRESQRGRDRQQMATAEGRVSASGHDVTRLAQPTSQLA
KDRKLSIKQRYVVGGGTEPPFSGRFTNGVKYNTKRRGTFNCIVCDLPAYA
SSSKFKSGTGWPSFYEPIDPDHVWETTDVSHGMVRKEVKCVRCHAHQGHV
FNDGPQPTGKRYCVNAASLTFKAGTGEDQGPSHGLTAGLVRSISRRLRRK
KKVEEPPATAPSSAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002579	Met_Sox_Rdtase_MsrB
IPR028427	Met_Sox_Rdtase
IPR011057	Mss4-like_sf