prot_C-linearis_contig100.697.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig100.697.1
Unique Nameprot_C-linearis_contig100.697.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length355
Homology
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5L8M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M0_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 5.860e-29
Identity = 136/251 (54.18%), Postives = 146/251 (58.17%), Query Frame = 0
Query:  142 MDSRAQMNRVYHGNGAAAGGAGGIGAELFDPGSWGMHIGVRGLDIGGVPASP-GSLSPAMAGGTGMPPMSPANVSAAGIAPLPGA---------------PIRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------------------------------VQPRPPLAMPQLL---QTTGGSGXXGEKRAATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKG 341
            M+S A MNRV  GNGAA  GAGG+GA LFDP S G+H+G  GLD+G  PA P GSL  A   G GMPPMSPANVSA  IAP PGA               P+ +            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  QPRP LAMPQLL   QTT  SG  G KRAA  TLAH DL  T +H+S+ Q RT GPGTSAS STGGRRKG
Sbjct:    1 MNSGAPMNRV--GNGAATAGAGGLGATLFDPSSGGVHMGAGGLDMGRAPAGPPGSLPRASMCGAGMPPMSPANVSAPSIAPHPGAGMSDSGLDIGLAQGPPVSLRLATTCGAEMPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMPPLSPANVSAPSIAPGPRRAQPRPALAMPQLLPVPQTTVSSGGVGGKRAAAETLAHVDLIPTTDHDSDNQRRTDGPGTSASTSTGGRRKG 249          
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 4.980e-16
Identity = 83/166 (50.00%), Postives = 91/166 (54.82%), Query Frame = 0
Query:  179 IGVRGLDIGGVPASPGSLSPAMAGGTGMPPMSPANVSAAGIAPLPGAPIRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVQPRPPLAMPQLL---QTTGGSGXXGEKRAATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKG 341
            +G  G+DIG     P SL  A   G  MP +SPANVSA+ IA  PG  + V                            XXXXXXXXXXX      QPRP LAMPQLL   QTT  SG  G KRAA  TLAH DL  T +H+S+ Q RT GPGTSAS STGGRRKG
Sbjct:    1 MGDSGIDIGHAQGPPVSLRLATTCGAEMP-ISPANVSASSIASHPGPLMGVGGADMRGAPGSSGGFPRATMCGAGMPPLXXXXXXXXXXXPGPRRAQPRPALAMPQLLPVPQTTVSSGGVGGKRAAAETLAHVDLIPTTDHDSDNQRRTDGPGTSASTSTGGRRKG 165          
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Match: D7FN79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN79_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 3.870e-7
Identity = 42/77 (54.55%), Postives = 49/77 (63.64%), Query Frame = 0
Query:  273 AVQPRPPLAMPQLL--------QTTGGSGXXGEKRAATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKG 341
            A QPR PLAMP  +        QTTG SG   E R A GT  HE+L+S++E ESN+Q   A  G S+SVSTGGRRKG
Sbjct:  148 ANQPRSPLAMPMFIPIRTSPAPQTTGTSGGVRENRGA-GTFVHENLNSSVEPESNRQLAAAVLGMSSSVSTGGRRKG 223          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig100.697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L8M0_9PHAE5.860e-2954.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6Z2_9PHAE4.980e-1650.00CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FN79_ECTSI3.870e-754.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig100contigC-linearis_contig100:347246..349314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig100.697.1mRNA_C-linearis_contig100.697.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig100 345055..349314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig100.697.1 ID=prot_C-linearis_contig100.697.1|Name=mRNA_C-linearis_contig100.697.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=355bp
MFSDCTLVRGGSPLPAGFRGSRTCTAHTHDTLLDTLALRTAAPPDLGGDF
ATMQRAADLEDAGAEQRIRSDDGGTGMDVRAGAQHSEQEDRGGQQRGAFN
IHRRSGGARGLGIRSSSPSPRATDLSNSCSAHLEDGGGGGTMDSRAQMNR
VYHGNGAAAGGAGGIGAELFDPGSWGMHIGVRGLDIGGVPASPGSLSPAM
AGGTGMPPMSPANVSAAGIAPLPGAPIRVGGLDIGGAPALGGSLSRAMAG
GTGVPPMSPANVPAAGIALLPGAVQPRPPLAMPQLLQTTGGSGGGGEKRA
ATGTLAHEDLSSTLEHESNKQPRTAGPGTSASVSTGGRRKGNAEARRQKL
PRVV*
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