mRNA_C-linearis_contig10.528.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.528.1
Unique NamemRNA_C-linearis_contig10.528.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 1.300e-174
Identity = 291/539 (53.99%), Postives = 355/539 (65.86%), Query Frame = 1
Query:    1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASD----------------------------------------------LRNGGESGSPIAVDPAPP---------------------------------RQLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380
            V++T+DGWT  +NDTYMS TCT+I+S+F   AL LEC+KH     GEDL  A KAMI R+GL GR +A+TTDCE SMVK GR+L E++GVTH+ C CHRLESITS+AF GPGVSKALALARG+VTRYT+SSQA+DRL+Q+C I ++   NVVQDV TRWWST+ SI RL+ LRRPITEHE IDS P LLK+KDWEVL LVE LLKP M  QKHLEASK VT  LV  Y+ADL+  LDEA+ +L+  S   A ++ A AK+DV+LCA+AL+ D   RWGD  +VL  +EGPRRQP  FKKEQV ATA+ PRSKSLYGI+E E  +VW A A  AV++ +  E  A++                                               ++ G S SPI V+PA                                   RQ+ESI+ RE++AFK TPG+ +   +KG +V  G PL+WWRVKAREYP LA+LARRVLCIPA QAQSERVFS AG + T TR+R+DPE+V LMVFL
Sbjct:    6 VALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHS-CPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAI--EAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEV-RGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 4.930e-148
Identity = 248/460 (53.91%), Postives = 308/460 (66.96%), Query Frame = 1
Query:    1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPAPPRQLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380
            V++T+DGWTS +NDTYM  TCT+I+S+F   AL +EC+KH G  TGEDL  A KAMI R+GL  R +A TTDCEPSMVK GR+L E++GVTH+ C CHRLESITS+AF GPGVSKALALAR +VTRY MSSQA+DRL+QM  I ++    VVQDV TRWWST+ASI RLL LRRPITEHERIDSIP LLK+KDWEVL +VEPL KP + +QKH EASK VT SLVI Y+ADLR +LDEA+ +L+      A ++ A AK+DV    + +R           +V+ E       P  FKK+QV ATA+DPRSKSLYGI+E E  +VW+AVA  AV++ +  +    D ++ G S S I V+PA           +  A    PG      DK                 ++    ++   RVLCIPASQ QSERVFS AG + T TR+R+DPE+VELM+FL
Sbjct:   50 VAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQ-AHACPAESIVAEAKKDVFFAPKHVRP---------TSVIVE-------PRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKAT-EDTQSAGASSSLIPVEPAAXXXXXXXXXXDFAAASAVPG------DK-----------------QQSANASSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 8.040e-142
Identity = 245/504 (48.61%), Postives = 309/504 (61.31%), Query Frame = 1
Query:    1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDG-VTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGS-PIAVDPAP----------PR-----------------------------QLESIVERELEAFKTTPGI---DMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380
            V+ITTDGWTS NN++YMSLT  +I  +++   L+L+C KH G  TGEDLA     M++RH L GRV+A  TDCEPSM+K GR+L  D   ++H+ C  HR+ES TS  FNG  +  AL LAR LV RY  SSQ A RL Q+CGI ++  L+V+QDV TRWWST A + RLLYL + I  HE +D +  LL D DWEVL L+EP+L+P M+ QK LE ++ VTGS+ IG MA+LR  L+ A+  L+  +          A E V   AEAL  DF +RWGDG N+L   EG RRQP  FK++QV+ATA+DPR+K LYGI + E   VW+AVA+AAV+I L          +  +  S P+   PAP          PR                             QL +IV+ E+ AFK  PGI   DM   + G K V  +PL  WR K  EYP+LAALARRVL IP+SQAQSERVFS AG   T TRSRL  E+VEL+V+L
Sbjct:   41 VAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 3.190e-129
Identity = 205/353 (58.07%), Postives = 251/353 (71.10%), Query Frame = 1
Query:   28 SPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPA 1086
            S +NDTYM+ TCT+I+S+F   AL LE +KH G  TGEDL  A KAMI R+GL GR +A TTDCEP MVK GR+L E++GV+H+ C CHR ESITS+AF GPGVSKALAL RG+VTRYTMSSQA++RL+QMC I ++    VVQDV TRWWST                   IDSIP LL +KDWEVL LVEPLL P M  QKHLEASK VT SLV  Y+ADLR +LDEA+ +L+  S   A ++ A AK+D++ CA AL+ D   RW DG +VL  +EGPRRQP  FKK+QV ATA+DPRSKSLYGI+E E  +VW+AVA  AV++ +  +    D ++ G S SPI V+PA
Sbjct:    3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYS-CPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKAT-EDTQSAGASSSPIPVEPA 337          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 2.960e-123
Identity = 229/480 (47.71%), Postives = 289/480 (60.21%), Query Frame = 1
Query:    1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRIL-AEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTS--GAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDP------------APPR-------------------------------QLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERV 1302
            V+ITTDGWTS +N++YMSLT  +I   +Q   L+L C KH G   GEDLA    +MI+RHGL GRV A  TDCEPSMVK GR+L      + H+ C  HR+ES TS  FNG  +  ALA AR +V RY  SSQ + RL    GI ++S L+V+QDV TRWWS+ A I RLLYL + I  HE  D+I  +L + DWEVL L+EP+L+P M+ QK LE +K VTGS+ +  + +LR  L+ A+  LR T   G +A+T +AM  E V+  AEAL +DF +RWGDG ++L   EG RRQP  FK +QV ATA+DPR+K LYGI + E   VW+AVA  AV+I  A E  +SD  N   SGS  A  P            AP R                               QL S+V+ E+ +F+TTPGI +      GK V  DPL WWR +  E+P LAALARRVL IP+SQA SERV
Sbjct:   77 VAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAM--EAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDI--AAEKFSSD--NTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 8.260e-72
Identity = 157/367 (42.78%), Postives = 196/367 (53.41%), Query Frame = 1
Query:    1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGV-THVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGI-CEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEA---LIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPA 1086
            V IT+DGWTS  NDTYMSLT T ITS ++   L+++C K EG  TG+ LA   KA + +HGL G+V AVTTDCEPSMVK GR+LA D  V T + CC +RLES +S  FNGP V K + LARGLVTRY  SSQAADRLKQ       + +  V+QDVVT                                                                GSLV+ ++ DLR  L++A   L++L   S A  NT  A     V+ C +ALRDD+  RWGDG+N+L   EGPRRQP  FK   V ATA+DPR+K  YG+DE E+ +VWK V   AV+I +      +  R   + G   A  PA
Sbjct:   41 VCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT----------------------------------------------------------------GSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAA----VMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAAGPA 339          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 8.190e-41
Identity = 98/234 (41.88%), Postives = 119/234 (50.85%), Query Frame = 1
Query:  814 DFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPI---------------------------------AVDPAPPRQLE------------SIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380
            DF +RWGDG N+L   EG RRQP  FK  QV ATA+DPR+K LYG+DE E+ +VWK V   AV+I +      +  R   + G                                    AV  A   QL+            S V  EL AFK + GI M   DK G  V  DPL WWRV+  ++P LA LARRVL IPA+QA+SER+FS AG I T  R+ L P  VEL+V L
Sbjct:   50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: UPI00165C184A (zinc finger BED domain-containing protein 1-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165C184A)

HSP 1 Score: 139 bits (351), Expect = 6.680e-33
Identity = 129/489 (26.38%), Postives = 213/489 (43.56%), Query Frame = 1
Query:    1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRW----------WSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIG-LANETMA---SDLRNGGESGSPIA----VDPAPPRQLESIVERELEAFKTTPGIDMLGVDKGGKVVL-----------GDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380
            VSIT DGWTS   D+Y+++T  ++  ++  ++  L+ R      TG +LA   + +++   L  +  A+ TD   +M+  G   A  +   HVRC  H L   + KA     V + L   R +VT +  S QAA+ L+++     + +  ++ DV TRW          W  H ++   +  RR I   E + ++     + D  ++  +  L+ P       L   K+ T S++    A L     E             +        D+  C    R DF  R+ D   +L  + G                 +DPR K L  +D   +  ++  + +  V++   A ++ A    +   GG  GSP      VD +P  + ++ +++    F TT        +K    +L           GD LQWW+ +  + P+L+ALA+  L IPA+   SERVFS AG I T+ RS L PEHV+ ++FL
Sbjct:    7 VSITVDGWTSGATDSYITVTAHYVNEEWDMQSHVLQTRVFNESHTGVNLAALLQDVLREWNLGEKKPALVTDNARNMLVAG---AGAEITPHVRCVAHTLNLASQKALKVDRVYELLVKVRKVVTYFHKSPQAAEVLREIQSQLRLPNHKLIHDVCTRWNSSVDMLERFWEQHPALLNAMLSRR-IRRGEGLLAV----NEDDMTLIQEIIKLMSPVKVATTLLSEEKSPTISMIAPIQAKLHKHFSE-------------DNTDLPIIADMKQC---FRQDFFDRYLDLQELLYNASG-----------------LDPRFKDLAFLDVDSRDLIFMKITSEVVKMNEQAGDSAALYEGEADEGGSDGSPSRERRDVDASPSPKKKTAMDQLFGEFITTRTPLKTMREKAKDEILKYRERDSLELGGDVLQWWKGQV-DLPLLSALAKDYLSIPATSVSSERVFSSAGNIVTAQRSLLHPEHVDQLIFL 453          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: UPI0020145D6B (E3 SUMO-protein ligase ZBED1 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020145D6B)

HSP 1 Score: 137 bits (346), Expect = 1.720e-31
Identity = 123/486 (25.31%), Postives = 215/486 (44.24%), Query Frame = 1
Query:    1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRK-HEGHPTGEDLAVAAKAMIKRHGLKGRV-LAVTTDCEPSMVKTGRILAEDDGVT-HVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPAPPRQ-----------------------LESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380
            ++ITTDGWTS   D+YM++T  +IT+D+Q     L+ R  +E H +     +  +A+I     +  V + VTTD   ++        E  G + H+RC  H +     +      +S+ L   R +VT +  S+ AA  LK+   + ++    +VQDV TRW S+H  + R L  +  +       S+   +KD    ++ L +  +K + +  + L+  K VT  +    M  + + +    +K R  +    +   +   +D+     A+  DF+ R+ D    L +                 +TA+DPR KSL  +DE     ++K++    +E         +      E  S  +  P P ++                       L ++V+ E+  ++    + +            +PL WW+    ++P LA LA+  L IPA+   SERVFS AG I T+ R+ L P++V++MVFL
Sbjct:  172 IAITTDGWTSRATDSYMTITAHYITADWQIANPVLQTRAVYESHTSDHLSEILKEAVIDWKISRTNVPVPVTTDNARNIANA----VEAAGFSPHIRCFAHTVNLAAQRGMGVHHMSRLLGRVRKVVTFFHRSTTAAAVLKEKQVMLQLPLHKLVQDVATRWNSSHDMLERYLEQQAAVFSALTDKSVKKNIKD----IITLSDDDVKLAEDVVQVLKPLKTVTTLMSTEQMPTISMIVP---LKHRILASMKHSVSDSTVVKDIKT---AIAHDFEDRYPDSDRALIQFLH-------------MSTALDPRFKSLPFLDETTHDTIFKSLTERILEDCSQTVQAQTSTEEQSEIASSCSNCPPPAKRAPMMAELFGDFFSMEQAASSSKPLSAVVDEEVRHYRAVQSLSLES----------NPLMWWKDNQNQFPHLAKLAKMYLGIPATSVPSERVFSTAGDIVTAQRASLSPDNVDMMVFL 620          
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: UPI001A7E9265 (E3 SUMO-protein ligase ZBED1-like n=4 Tax=Percomorphaceae TaxID=1489872 RepID=UPI001A7E9265)

HSP 1 Score: 136 bits (342), Expect = 1.820e-31
Identity = 134/478 (28.03%), Postives = 212/478 (44.35%), Query Frame = 1
Query:   10 TTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGL-KGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITE------HERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESE--------GPRRQPNAFKKEQVFA------TAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPAPPRQLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380
            TTD W+S   + Y SLT  +IT D   EA +L+        TGE++A   +  +    L +  ++ +TTD   +MVK  ++    +  T ++C  HRL      A     VS+A+ L + LV  ++ S +    L +     ++   +++ +  TRW S    IAR+L   + I++      H R   IP+    +D EVL  +   L P  E    L   + V+    I Y+        + ++ L  TS      V A+  ED  L   +++    +   D Y+ L   E         PR +      + + A      T M   ++  +  ++  + E  +   +A    G A +T+ S  +    S        A P  LE +VE EL ++  TP ID  G D        DPL WW+V    +P L  +AR+ LC+PA+ A SER+FS  G I T TRS L P  V+++VFL
Sbjct:   60 TTDMWSSRTAEPYQSLTVHYITEDLHLEARSLQTAYFPKDHTGENIAAGLREGLACWDLPEDNLVCITTDNASNMVKAAQL----NEWTRLQCFGHRLHLAIENAIKDGRVSRAIGLCKKLVGHFSHSWKKKAALTEAQKELKLPEHSLITECPTRWGSKEKMIARVLEQMKAISQVLTGDRHAR-SLIPTW---QDAEVLESIHKALHPLSEFTDALSGEEYVS----ISYL--------KPVLHLLATS------VLAVDAEDTDL-TRSIKTKVLAYLNDKYSDLNTQELLDVASFMDPRFKTQYISADNLPAIKARLKTEMVESARRTHNQEKRSRTETAQNSPSAQASGGKAKKTLGSLFKTSAASS-------ALPLPLEDVVEAELNSYLLTPVID--GED--------DPLAWWKVHNIHFPRLCKMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAKVDMLVFL 493          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHP9_9PHAE1.300e-17453.99Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5JJV8_9PHAE4.930e-14853.91Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LCS5_ECTSI8.040e-14248.61Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KVI1_9PHAE3.190e-12958.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUY5_9PHAE2.960e-12347.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE8.260e-7242.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWI1_9PHAE8.190e-4141.88Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
UPI00165C184A6.680e-3326.38zinc finger BED domain-containing protein 1-like n... [more]
UPI0020145D6B1.720e-3125.31E3 SUMO-protein ligase ZBED1 n=1 Tax=Megalobrama a... [more]
UPI001A7E92651.820e-3128.03E3 SUMO-protein ligase ZBED1-like n=4 Tax=Percomor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1836478..1837938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.6
Seed ortholog evalue7.3e-120
Seed eggNOG ortholog2880.D7G5Z0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein dimerization activity
EggNOG OGsKOG1121@1,KOG1121@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1380
Cds size1380
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927338.55025-CDS-C-linearis_contig10:1836477..18375671622927338.55025-CDS-C-linearis_contig10:1836477..1837567Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1836478..1837567 +
1690879635.9657252-CDS-C-linearis_contig10:1836477..18375671690879635.9657252-CDS-C-linearis_contig10:1836477..1837567Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1836478..1837567 +
1622927338.56013-CDS-C-linearis_contig10:1837648..18379381622927338.56013-CDS-C-linearis_contig10:1837648..1837938Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1837649..1837938 +
1690879635.9867454-CDS-C-linearis_contig10:1837648..18379381690879635.9867454-CDS-C-linearis_contig10:1837648..1837938Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 1837649..1837938 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.528.1prot_C-linearis_contig10.528.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 1836478..1837938 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.528.1

>prot_C-linearis_contig10.528.1 ID=prot_C-linearis_contig10.528.1|Name=mRNA_C-linearis_contig10.528.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=460bp
VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLA
VAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRL
ESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLN
VVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLV
EPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAA
ANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKE
QVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNG
GESGSPIAVDPAPPRQLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDP
LQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLD
PEHVELMVFL
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mRNA from alignment at C-linearis_contig10:1836478..1837938+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.528.1 ID=mRNA_C-linearis_contig10.528.1|Name=mRNA_C-linearis_contig10.528.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1461bp|location=Sequence derived from alignment at C-linearis_contig10:1836478..1837938+ (Chordaria linearis ClinC8C monoicous)
GTCTCCATCACCACAGACGGGTGGACATCGCCAAACAACGACACGTACAT GTCGCTCACCTGCACCTTCATCACCTCCGACTTCCAGCCCGAGGCACTTA CCCTGGAGTGCAGGAAGCACGAAGGGCACCCAACGGGGGAGGATCTGGCT GTAGCAGCGAAGGCGATGATCAAGCGCCATGGTCTGAAGGGTCGGGTCCT CGCAGTCACCACGGATTGCGAGCCGTCCATGGTCAAGACGGGTCGTATTC TCGCGGAGGATGATGGCGTCACGCACGTCCGTTGCTGCTGCCACCGCCTC GAGTCAATCACATCCAAAGCCTTCAACGGACCGGGCGTATCGAAGGCGCT GGCTCTTGCGCGCGGCTTGGTGACTCGCTACACGATGTCCAGCCAGGCCG CTGATCGCTTGAAACAGATGTGCGGCATCTGCGAAATCTCCAGCTTGAAC GTTGTTCAAGATGTCGTCACAAGGTGGTGGTCTACGCACGCGTCCATCGC CCGCCTTCTCTACCTTCGTCGTCCCATCACCGAGCACGAGAGGATCGACA GCATCCCCTCCTTGCTGAAGGACAAGGACTGGGAGGTGCTTGTGTTGGTG GAGCCGCTGCTGAAGCCGTCCATGGAGACGCAGAAACACCTGGAGGCTTC CAAGGCCGTGACCGGAAGCTTAGTGATCGGGTACATGGCGGACCTGCGCT TAGATCTCGACGAGGCGCTCATCAAGCTGAGGAACACCTCCGGTGCCGCT GCCAACACGGTCAAGGCCATGGCGAAGGAAGATGTCGTTCTTTGCGCTGA GGCGCTCCGGGACGATTTCGACAGTCGTTGGGGCGACGGGTACAACGTGC TCACCGAGAGTGAGGGTCCTCGTCGGCAACCCAATGCGTTCAAGAAAGAG CAGGTGTTTGCCACCGCGATGGACCCTCGGAGCAAGAGCCTGTACGGCAT CGATGAAGTGGAGCAACCGGAAGTGTGGAAGGCGGTTGCGGCCGCGGCTG TCGAGATTGGGCTGGCAAACGAAACCATGGCGAGCGATCTGCGCAATGGT GGTGAATCCGGTTCTCCGATTGCCGTTGACCCCGCTCCCCGTGTTCGTCG CCGTGGCTTCGCAGCAGCTTCTGCAGCCCACGCGCAAGGTAACGGTGCCG TGGCCGGACCCTCGACTTCAGCACGCCAACTGGAGAGCATCGTCGAGCGG GAGTTGGAGGCTTTCAAGACAACACCTGGGATAGATATGTTAGGCGTTGA CAAGGGCGGCAAGGTGGTACTCGGGGACCCACTGCAGTGGTGGCGTGTTA AGGCGCGGGAATACCCCATGCTGGCCGCACTGGCTCGCCGGGTGTTGTGC ATTCCCGCGTCCCAAGCGCAGTCGGAGCGTGTGTTTTCGATAGCGGGACA AATCGCAACGTCGACTCGTTCGCGACTAGACCCCGAGCACGTAGAGCTCA TGGTATTCCTT
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Coding sequence (CDS) from alignment at C-linearis_contig10:1836478..1837938+

>mRNA_C-linearis_contig10.528.1 ID=mRNA_C-linearis_contig10.528.1|Name=mRNA_C-linearis_contig10.528.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at C-linearis_contig10:1836478..1837938+ (Chordaria linearis ClinC8C monoicous)
GTCTCCATCACCACAGACGGGTGGACATCGCCAAACAACGACACGTACAT
GTCGCTCACCTGCACCTTCATCACCTCCGACTTCCAGCCCGAGGCACTTA
CCCTGGAGTGCAGGAAGCACGAAGGGCACCCAACGGGGGAGGATCTGGCT
GTAGCAGCGAAGGCGATGATCAAGCGCCATGGTCTGAAGGGTCGGGTCCT
CGCAGTCACCACGGATTGCGAGCCGTCCATGGTCAAGACGGGTCGTATTC
TCGCGGAGGATGATGGCGTCACGCACGTCCGTTGCTGCTGCCACCGCCTC
GAGTCAATCACATCCAAAGCCTTCAACGGACCGGGCGTATCGAAGGCGCT
GGCTCTTGCGCGCGGCTTGGTGACTCGCTACACGATGTCCAGCCAGGCCG
CTGATCGCTTGAAACAGATGTGCGGCATCTGCGAAATCTCCAGCTTGAAC
GTTGTTCAAGATGTCGTCACAAGGTGGTGGTCTACGCACGCGTCCATCGC
CCGCCTTCTCTACCTTCGTCGTCCCATCACCGAGCACGAGAGGATCGACA
GCATCCCCTCCTTGCTGAAGGACAAGGACTGGGAGGTGCTTGTGTTGGTG
GAGCCGCTGCTGAAGCCGTCCATGGAGACGCAGAAACACCTGGAGGCTTC
CAAGGCCGTGACCGGAAGCTTAGTGATCGGGTACATGGCGGACCTGCGCT
TAGATCTCGACGAGGCGCTCATCAAGCTGAGGAACACCTCCGGTGCCGCT
GCCAACACGGTCAAGGCCATGGCGAAGGAAGATGTCGTTCTTTGCGCTGA
GGCGCTCCGGGACGATTTCGACAGTCGTTGGGGCGACGGGTACAACGTGC
TCACCGAGAGTGAGGGTCCTCGTCGGCAACCCAATGCGTTCAAGAAAGAG
CAGGTGTTTGCCACCGCGATGGACCCTCGGAGCAAGAGCCTGTACGGCAT
CGATGAAGTGGAGCAACCGGAAGTGTGGAAGGCGGTTGCGGCCGCGGCTG
TCGAGATTGGGCTGGCAAACGAAACCATGGCGAGCGATCTGCGCAATGGT
GGTGAATCCGGTTCTCCGATTGCCGTTGACCCCGCTCCCCGTCTCCATCA
CCACAGACGGGTGGACATCGCCAAACAACGACACGTACATGTCGCTCACC
TGCACCTTCATCACCTCCGACTTCCAGCCCGAGGCACTTACCCTGGAGTG
CAGGAAGCACGAAGGGCACCCAACGGGGGAGGATCTGGCTGTAGCAGCGA
AGGCGATGATCAAGCGCCATGGTCTGAAGGGTCGGGTCCTCGCAGTCACC
ACGGATTGCGAGCCGTCCATGGTCAAGACGGGTCGTATTCTCGCGGAGGA
TGATGGCGTCACGCACGTCCGTTGCTGCTGCCACCGCCTCGAGTCAATCA
CATCCAAAGCCTTCAACGGACCGGGCGTATCGAAGGCGCTGGCTCTTGCG
CGCGGCTTGGTGACTCGCTACACGATGTCCAGCCAGGCCGCTGATCGCTT
GAAACAGATGTGCGGCATCTGCGAAATCTCCAGCTTGAACGTTGTTCAAG
ATGTCGTCACAAGGTGGTGGTCTACGCACGCGTCCATCGCCCGCCTTCTC
TACCTTCGTCGTCCCATCACCGAGCACGAGAGGATCGACAGCATCCCCTC
CTTGCTGAAGGACAAGGACTGGGAGGTGCTTGTGTTGGTGGAGCCGCTGC
TGAAGCCGTCCATGGAGACGCAGAAACACCTGGAGGCTTCCAAGGCCGTG
ACCGGAAGCTTAGTGATCGGGTACATGGCGGACCTGCGCTTAGATCTCGA
CGAGGCGCTCATCAAGCTGAGGAACACCTCCGGTGCCGCTGCCAACACGG
TCAAGGCCATGGCGAAGGAAGATGTCGTTCTTTGCGCTGAGGCGCTCCGG
GACGATTTCGACAGTCGTTGGGGCGACGGGTACAACGTGCTCACCGAGAG
TGAGGGTCCTCGTCGGCAACCCAATGCGTTCAAGAAAGAGCAGGTGTTTG
CCACCGCGATGGACCCTCGGAGCAAGAGCCTGTACGGCATCGATGAAGTG
GAGCAACCGGAAGTGTGGAAGGCGGTTGCGGCCGCGGCTGTCGAGATTGG
GCTGGCAAACGAAACCATGGCGAGCGATCTGCGCAATGGTGGTGAATCCG
GTTCTCCGATTGCCGTTGACCCCGCTCCCCCACGCCAACTGGAGAGCATC
GTCGAGCGGGAGTTGGAGGCTTTCAAGACAACACCTGGGATAGATATGTT
AGGCGTTGACAAGGGCGGCAAGGTGGTACTCGGGGACCCACTGCAGTGGT
GGCGTGTTAAGGCGCGGGAATACCCCATGCTGGCCGCACTGGCTCGCCGG
GTGTTGTGCATTCCCGCGTCCCAAGCGCAGTCGGAGCGTGTGTTTTCGAT
AGCGGGACAAATCGCAACGTCGACTCGTTCGCGACTAGACCCCGAGCACG
TAGAGCTCATGGTATTCCTTCACGCCAACTGGAGAGCATCGTCGAGCGGG
AGTTGGAGGCTTTCAAGACAACACCTGGGATAGATATGTTAGGCGTTGAC
AAGGGCGGCAAGGTGGTACTCGGGGACCCACTGCAGTGGTGGCGTGTTAA
GGCGCGGGAATACCCCATGCTGGCCGCACTGGCTCGCCGGGTGTTGTGCA
TTCCCGCGTCCCAAGCGCAGTCGGAGCGTGTGTTTTCGATAGCGGGACAA
ATCGCAACGTCGACTCGTTCGCGACTAGACCCCGAGCACGTAGAGCTCAT
GGTATTCCTT
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