mRNA_C-linearis_contig10.516.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig10.516.1
Unique Name	mRNA_C-linearis_contig10.516.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: D7FZW7_ECTSI (DUF2470 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW7_ECTSI)

HSP 1 Score: 480 bits (1235), Expect = 2.490e-164
Identity = 248/283 (87.63%), Postives = 264/283 (93.29%), Query Frame = 1

Query:  280 EEAGHSPPKATGHAAGKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDLEASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITG-VEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAAA 1125
            E +GHSPPKATGHAAG GPQR+PE+EAL+ARI+EHQ  AARLS TEEVRNLMQYSTGFGVLSTNS+++EGYPSGSVVGFSLD+ GRPLFAFSS+SAHTGDL A S  SLTVT+ATFKGAADGRV LIGDVNKVP+EDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDV PEDYL TAPDAVAEFSA I +HMNDDHS+TTRAMI H+ITG VEV SAQITAVDRLGMYV+VGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA A
Sbjct:   17 EASGHSPPKATGHAAGPGPQRSPEQEALAARIQEHQQAAARLSHTEEVRNLMQYSTGFGVLSTNSRTLEGYPSGSVVGFSLDDKGRPLFAFSSMSAHTGDLAADSRVSLTVTAATFKGAADGRVSLIGDVNKVPEEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVNPEDYLTTAPDAVAEFSAPISKHMNDDHSDTTRAMIAHFITGGVEVTSAQITAVDRLGMYVLVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAMA 299

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A836CG39_9STRA (DUF2470 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG39_9STRA)

HSP 1 Score: 347 bits (890), Expect = 1.600e-112
Identity = 182/273 (66.67%), Postives = 218/273 (79.85%), Query Frame = 1

Query:  310 TGHAA-GKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDLEASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITG-VEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAA 1122
            TGH   G GPQRTPE+EALSARI+EHQ  AARL+K EEV+ L+ YSTGFGVLSTNSK +EGYP+GSVVGF LD+ GRPLFAFS++SAHT DL A   AS+T+ +A FKGA+DGRV LIGDV +VP++++ +VR  YK KHPNA+WVDFGDF   RMDTIKA+RFVGGFAMAGD+  EDYL T PD +A F+  I+ HMN DHS++T AM++HYITG  +V SA +  VDR GM V+V M  G+SGKLRLPFP PA+ RK VK  IVEMT+AAA
Sbjct:   10 TGHQPRGGGPQRTPEQEALSARIQEHQRSAARLTKAEEVKTLVAYSTGFGVLSTNSKKLEGYPNGSVVGFGLDDAGRPLFAFSTMSAHTSDLGADGRASMTIMAANFKGASDGRVTLIGDVGRVPEDEIEAVRTSYKVKHPNAFWVDFGDFSWFRMDTIKAIRFVGGFAMAGDITSEDYLATKPDPIAGFAEPIMTHMNSDHSDSTAAMVEHYITGGAKVDSATLVGVDRKGMNVLVAM-GGESGKLRLPFPSPADDRKAVKDRIVEMTRAAA 281

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A7S4EVY0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVY0_CHRCT)

HSP 1 Score: 298 bits (764), Expect = 2.270e-92
Identity = 157/275 (57.09%), Postives = 204/275 (74.18%), Query Frame = 1

Query:  313 GHAAGKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDLEAS---SHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAAAA 1128
            GH     P+ + EE+A+ A++  HQ  AARLSK E+ R+L+ YSTG+GVLST SKS+ G+PSGSVVGF++D+ G P+F FS +S H  DL AS   + A+LTVT+  FKGAA+GRV L+G V +VP ++   +RE+Y+ KHPNA+WVDFGDF   +MD +KA+RFVGGFA AGD+ PE+Y++   D +  F+  ++EHMN DHS+ T  M++HYI   EV  A++ A+DRLGM V V    GQS KLRLPFPRPAESRKDVKTLIVEMTQA+A A
Sbjct:   98 GHQVRNAPELSEEEKAVQAKVMAHQQDAARLSKAEDSRSLVAYSTGYGVLSTMSKSLPGFPSGSVVGFAIDDKGLPIFCFSGMSGHAQDLLASPDAAPAALTVTANDFKGAAEGRVTLVGTVRRVPSDEADPLREIYRAKHPNAFWVDFGDFSWFKMDELKAVRFVGGFARAGDMTPEEYMQAEVDPIQAFAKPVMEHMNADHSDATTLMVQHYIGLPEVEDAKVAALDRLGMTVQVTR-KGQSFKLRLPFPRPAESRKDVKTLIVEMTQASAKA 371

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A7S4FQ63_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FQ63_9EUGL)

HSP 1 Score: 286 bits (731), Expect = 1.770e-87
Identity = 146/266 (54.89%), Postives = 198/266 (74.44%), Query Frame = 1

Query:  334 PQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDLEASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAAAAA 1131
            P+ + EE  L+  ++EHQ  AARLS  E+ RN+MQY TG+GV+STNS+S +GYPSGS+VG++ D+ GRP+F+FS++S+HT D++     SLTVT   FKGAADGRV L GD+ +VP E+  +V  MY KKHP+A+WV FGDF   RM+ IK +R++GGFA AG + PE+Y  TAPDA+A F+  ++ HMN DH +   AM+ HY+  ++V +A I  +DRLGM ++V   +GQS KLRLPFPRPA +RK+VK LIVEMT+A+A AA
Sbjct:  104 PKMSEEEMKLAQALQEHQKEAARLSHAEDARNMMQYGTGYGVISTNSESDDGYPSGSIVGYAPDDKGRPVFSFSTMSSHTQDIQKDPRVSLTVTVEGFKGAADGRVSLTGDLVRVPKEEKEAVAAMYLKKHPDAFWVQFGDFSWWRMENIKTIRYIGGFARAGSITPEEYEATAPDAIAAFATPVMSHMNADHGDANVAMVNHYLP-IQVEAANIVGLDRLGMDMMVTR-EGQSFKLRLPFPRPATNRKEVKDLIVEMTKASAKAA 367

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A7S3U682_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U682_9SPIT)

HSP 1 Score: 272 bits (696), Expect = 2.200e-82
Identity = 146/271 (53.87%), Postives = 195/271 (71.96%), Query Frame = 1

Query:  313 GHAAGKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDL---EASSHASLTVTSATFKGAADGRVGLIGDVNKVPDED-LPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQ 1113
            GH     PQ + EE+ + A + EHQ GAARLS+ E+ R+L+ YS+G+ VLST SK ++GYPSGS+VGF+ D+ G PLF FS++S+HT DL      + A+LTVT+  F+GAADGRV L+GDV +V DE+ L ++R+ Y++KHP+A+WVDFGDF   RM  +KA+RFVGGFA AGD+ P+DY     D +  F+  ++ HMN+DHS++T AM+ HYI   +V  A + A+DRLG  V V    GQ+ KLRLPFPR AE RKDVK LIV+MTQ
Sbjct:   64 GHQVTGAPQLSEEEKKVQAAVMEHQKGAARLSQAEDARSLIGYSSGYAVLSTLSKQLDGYPSGSLVGFATDDKGLPLFCFSAMSSHTQDLMRDPKGAKAALTVTATGFEGAADGRVTLVGDVARVKDEEELVTLRKTYREKHPDAFWVDFGDFSWWRMRELKAVRFVGGFARAGDIAPDDYQAATVDPIQAFAKPVMNHMNEDHSDSTIAMVMHYIGLNQVEKASLVALDRLGFMVQVTRL-GQTFKLRLPFPRAAEDRKDVKNLIVQMTQ 333

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A6T8CG84_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8CG84_9EUKA)

HSP 1 Score: 267 bits (682), Expect = 2.100e-81
Identity = 139/258 (53.88%), Postives = 188/258 (72.87%), Query Frame = 1

Query:  349 EEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDLEASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQA 1116
            EE+ +   + EHQ GAARLS+ E+ R+L+ Y++G+ VLST SK+++GYPSGS+VGF+ DE G P+F FS++S HT DL  +  A+L VT+  F+GAADGRV LIGDV +   E++ +  ++E+Y+ KHPNA+WVDFGDF   RM  +KA+ FVGGFA AG+  P DY++ + D +  F+A ++ HMN DHSE+T AM+ HYI   +V  A++  +DRLG  V V    GQ+ KLRLPFPR AE RKDVKTLIV+MTQA
Sbjct:    3 EEKRVQTAVMEHQRGAARLSQAEDSRSLVAYNSGYAVLSTLSKAVDGYPSGSLVGFATDEKGLPVFCFSAMSGHTKDLAKAGKAALCVTAKGFEGAADGRVTLIGDVKRCSKEEVEADGLKELYRAKHPNAFWVDFGDFTWYRMTELKAVNFVGGFARAGNPSPADYMDASVDPIQAFAAPVMGHMNADHSESTIAMVMHYIGLPQVEKAELVQLDRLGFMVQVTR-TGQTFKLRLPFPRAAEDRKDVKTLIVQMTQA 259

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A7S0LER7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LER7_9EUKA)

HSP 1 Score: 270 bits (689), Expect = 2.960e-81
Identity = 146/278 (52.52%), Postives = 193/278 (69.42%), Query Frame = 1

Query:  313 GHAAGKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDL-------EASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1119
            GHA    P+ + EE+ +   + EHQ  AARLS+ E+ R+L+ YSTG+ VLST S +++GYPSG++VGF+ DE G P F FS++S+HT DL       E+   A+L VT+  F+GAADGRV LIGDV++V  E +    +RE+Y++KHPNA+WVDFGDF   RM  +KA+ FVGGFA AG + PE Y+    D +  F+A ++ HMNDDHS +T AM+ HYI   +V  A++  +DRLG  V V    GQ+ KLRLPFPRPA  RKDVKTLIVEMT+AA
Sbjct:   74 GHAVRNQPELSEEEKIVQTAVMEHQRSAARLSQAEDARSLVGYSTGYAVLSTLSSALDGYPSGALVGFAHDERGLPFFCFSAMSSHTKDLVAAERSCESGGKAALCVTAKGFEGAADGRVTLIGDVSRVKKEQVEEQGLRELYRQKHPNAFWVDFGDFTFYRMHELKAINFVGGFARAGSIDPEAYMNAVIDPIQAFAAPVMSHMNDDHSSSTTAMVMHYIGLPQVEKAELVQLDRLGFMVQVTRL-GQTFKLRLPFPRPAGDRKDVKTLIVEMTRAA 350

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A6U3QPI0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3QPI0_9STRA)

HSP 1 Score: 266 bits (680), Expect = 3.050e-80
Identity = 148/294 (50.34%), Postives = 191/294 (64.97%), Query Frame = 1

Query:  280 EEAGHSPPKATGH---AAGKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDLEASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVV-----GMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAAAAAAQK 1137
            EEA      A GH   +AG   +  PEE  +     EHQ  A +L     VR L+QY+ GF V+STNSK+  GYP GSVVGF+ DE GRP+F FS +S HT DL A    S+T+ +  FKGAADGRV L+G V  VP E+  +++++Y  KHP A+WV+FGDF   RMD I+ +RFVGGFA AG+V PE+Y   +PD ++ F   +  HMNDDH ++T AMI   I G++V+ A IT+VD LGMYV V          Q  KLRLPFPR AE RKDVK +IVEMT++AA A+++
Sbjct:   56 EEAKVEKKNAPGHDVRSAGVAQEMDPEEMKVQQAFGEHQQNAPKLDFATSVRTLVQYNHGFAVMSTNSKANPGYPGGSVVGFAPDENGRPVFIFSGMSTHTQDLLADPRCSVTIAAKEFKGAADGRVNLMGKVKLVPSEEREALKDIYLAKHPGAFWVNFGDFNWFRMDEIEDIRFVGGFARAGNVTPEEYAAASPDEISAFGMHVANHMNDDHMDSTIAMISSQIPGLDVSEAVITSVDSLGMYVKVTRTPRASDQPQQFKLRLPFPRKAEDRKDVKNIIVEMTRSAAVASKE 349

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: R1D7B7_EMIHU (DUF2470 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D7B7_EMIHU)

HSP 1 Score: 263 bits (673), Expect = 5.000e-80
Identity = 139/265 (52.45%), Postives = 192/265 (72.45%), Query Frame = 1

Query:  334 PQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDL-EASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1119
            P+ + EE+A+ A + EHQ GAARL+  E+ R+L+ YS+G+ VLST S  ++GYP+G++VGF+ D  G P+F FS++S+HT DL +    A+LTVT+  F+GAADGRV LIGDV +V  E +    ++E+Y+++HPNA+WVDFGDF   RM ++KA+ FVGGFA A    P++YL    D +  F+A ++ HMNDDH+E+T AM+ HY+   +V +AQ+ A+DRLG  V V    GQ+ KLRLPFPR A  RKDVK+LIVEMTQAA
Sbjct:    2 PELSEEEKAVQAAVMEHQRGAARLTMAEDARSLVAYSSGYAVLSTLSSQVDGYPNGALVGFAPDASGLPVFVFSAMSSHTKDLSKVGGQAALTVTAKGFEGAADGRVTLIGDVERVGKEQVEKEGLKELYRERHPNAFWVDFGDFTFYRMASLKAVNFVGGFARAAAPSPDEYLSAEVDPIQAFAAPVMGHMNDDHAESTVAMVMHYVGLPDVEAAQLVALDRLGFMVQVTR-QGQTFKLRLPFPRAAADRKDVKSLIVEMTQAA 265

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BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Match: A0A7S3TA66_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TA66_EMIHU)

HSP 1 Score: 266 bits (679), Expect = 6.990e-80
Identity = 141/272 (51.84%), Postives = 195/272 (71.69%), Query Frame = 1

Query:  313 GHAAGKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTGFGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDL-EASSHASLTVTSATFKGAADGRVGLIGDVNKVPDEDLPS--VREMYKKKHPNAYWVDFGDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHMNDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRLPFPRPAESRKDVKTLIVEMTQAA 1119
            GHA    P+ + EE+A+ A + EHQ GAARL+  E+ R+L+ YS+G+ VLST S  ++GYP+G++VGF+ D  G P+F FS++S+HT DL +    A+LTVT+  F+GAADGRV LIGDV +V  E +    ++E+Y+++HPNA+WVDFGDF   R+ ++KA+ FVGGFA A    P++YL    D +  F+A ++ HMNDDH+E+T AM+ HY+   +V +AQ+ A+DRLG  V V    GQ+ KLRLPFPR A  RKDVK+LIVEMTQAA
Sbjct:   71 GHAVRNMPELSEEEKAVQAAVMEHQRGAARLTMAEDARSLVAYSSGYAVLSTLSSQVDGYPNGALVGFAPDASGLPVFVFSAMSSHTKDLSKVGGQAALTVTAKGFEGAADGRVTLIGDVERVGKEQVEKEGLKELYRERHPNAFWVDFGDFTFYRLASLKAVNFVGGFARAAAPSPDEYLSAEVDPIQAFAAPVMGHMNDDHAESTVAMVMHYVGLPDVEAAQLVALDRLGFMVQVTR-QGQTFKLRLPFPRAAADRKDVKSLIVEMTQAA 341

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot

BLAST of mRNA_C-linearis_contig10.516.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FZW7_ECTSI	2.490e-164	87.63	DUF2470 domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A836CG39_9STRA	1.600e-112	66.67	DUF2470 domain-containing protein n=1 Tax=Tribonem...	[more]
A0A7S4EVY0_CHRCT	2.270e-92	57.09	Hypothetical protein n=1 Tax=Chrysotila carterae T...	[more]
A0A7S4FQ63_9EUGL	1.770e-87	54.89	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]
A0A7S3U682_9SPIT	2.200e-82	53.87	Hypothetical protein n=1 Tax=Strombidinopsis acumi...	[more]
A0A6T8CG84_9EUKA	2.100e-81	53.88	Hypothetical protein n=1 Tax=Prymnesium polylepis ...	[more]
A0A7S0LER7_9EUKA	2.960e-81	52.52	Hypothetical protein n=1 Tax=Coccolithus braarudii...	[more]
A0A6U3QPI0_9STRA	3.050e-80	50.34	Hypothetical protein n=1 Tax=Ditylum brightwellii ...	[more]
R1D7B7_EMIHU	5.000e-80	52.45	DUF2470 domain-containing protein n=1 Tax=Emiliani...	[more]
A0A7S3TA66_EMIHU	6.990e-80	51.84	Hypothetical protein n=2 Tax=Emiliania huxleyi Tax...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig10	contig	C-linearis_contig10:1688376..1693491 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	487.6
Seed ortholog evalue	5.1e-135
Seed eggNOG ortholog	2880.D7FZW7
Hectar predicted targeting category	chloroplast
EggNOG free text desc.	Protein of unknown function (DUF2470)
EggNOG OGs	2QV7B@2759,COG0748@1
Ec32 ortholog description	FMN-binding split barrel
Ec32 ortholog	Ec-22_003810.1
COG Functional cat.	P
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	9
Model size	1847
Cds size	1140
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig10.516.1	prot_C-linearis_contig10.516.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig10 1689083..1693491 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927337.1250768-UTR-C-linearis_contig10:1688375..1689082	1622927337.1250768-UTR-C-linearis_contig10:1688375..1689082	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig10 1688376..1689082 -
1690879634.8424933-UTR-C-linearis_contig10:1688375..1689082	1690879634.8424933-UTR-C-linearis_contig10:1688375..1689082	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig10 1688376..1689082 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig10:1688376..1693491-
coding sequence from alignment at C-linearis_contig10:1688376..1693491-

protein sequence of mRNA_C-linearis_contig10.516.1

>prot_C-linearis_contig10.516.1 ID=prot_C-linearis_contig10.516.1|Name=mRNA_C-linearis_contig10.516.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=380bp
MRSFTICGASSLLLAGARAFTVSPAGKIEPLFSLPSSCARLSLAQNAYRI
PTRGSLSRFPSVSSPPGGRRGQQQQQQSRLRMEAASDSTAEKKEEAGHSP
PKATGHAAGKGPQRTPEEEALSARIKEHQDGAARLSKTEEVRNLMQYSTG
FGVLSTNSKSIEGYPSGSVVGFSLDEMGRPLFAFSSLSAHTGDLEASSHA
SLTVTSATFKGAADGRVGLIGDVNKVPDEDLPSVREMYKKKHPNAYWVDF
GDFRLMRMDTIKAMRFVGGFAMAGDVKPEDYLETAPDAVAEFSALILEHM
NDDHSETTRAMIKHYITGVEVASAQITAVDRLGMYVVVGMPDGQSGKLRL
PFPRPAESRKDVKTLIVEMTQAAAAAAQK*

mRNA from alignment at C-linearis_contig10:1688376..1693491-

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig10.516.1 ID=mRNA_C-linearis_contig10.516.1|Name=mRNA_C-linearis_contig10.516.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5116bp|location=Sequence derived from alignment at C-linearis_contig10:1688376..1693491- (Chordaria linearis ClinC8C monoicous)
ATGCGCTCCTTCACCATCTGCGGGGCGTCCTCTTTGCTTCTCGCTGGTGC
TCGTGCTTTCACCGTCTCTCCGGCAGGCAAGATCGAGCCCCTTTTTTCTC
TCCCTTCTTGTTTATTTTTTCTCTGTGCGAAACGTCAGTCGACGCCCAAC
CTGTGAACAAGTTATTTCCAGTGCGACTGTTGTCGACTACACTTTTTGTA
CCCTCCCTCACCGCCTTCGGTTCCCTCAGGAAACGATGATGGCTGTTTGA
CACTTTTTGATTGTACTGCAGGAGAGTTGTGTACCTTTTATTGTGACACG
AACCAAAAGAAAAGAGCCTTTCGCCGCCGCCGTCGCTGCTGCTGCTGCTG
CTGCTGCTGTGCAAGATCGTAGAATAGGAGGTACACGGCCGGTAAAGACA
CGCTTTCTCGCCACCACGGGTCAACAGTTTTCTTGTGTAAGACAACGACT
TGCCTCCCACCACCACGATCACACACTTCTACTTGCGCTTATACAACATG
GTTGACGTTCCCAAACTTCCCCGCCTCCCTTCAACCCCGCCCCCCCCCCC
GTTTTCCAGCTTGCGCCCGGTTGTCTCTCGCGCAGAACGCCTACCGCATC
CCAACCCGAGGGTCGCTCTCTCGATTCCCCTCCGTCTCTTCGCCCCCCGG
TGGCCGTCGCGGACAGCAGCAGCAGCAGCAAAGCCGACTGAGGATGGAGG
CGGCGAGTGACAGCACGGCCGAGAAAAAGGAGGAGGGTGAGACCAAATGA
GCGACGAGAGCGTGCTGCGCGGTGCGAGATCTCTCTCTCTCTCTCTCTGA
CTTGAAGGCGGACATTCTTTTTGGGGGCGTTTTAGGCTTGTTTGGAGATA
GCTTGAGTTCTTGACCGTGTGAGCACGCGTGCGACTTGGCTTCATCTGGC
TGAAAATTCTTGGCTATGACCGGGGCTCAGGGCGGCGGGATCGCCAGCAG
CTTCTTCCGAAGCTTTGGGACGGTGCAAGAGCGGTTCTTTCAGAGGGTCT
GCCGCCCACAAGTGAACCCGAAGTGCCGGTGATTCTTATTCGTCGTAGAT
ACATGTATATGGTGGCATCGAATCAGCGCCGATGATTTAGCTTCCACTCT
TTTTTCTTCCTTTTTTTTTTAAGCAGGACATAGCCCCCCCAAGGCTACGG
GGCACGCTGCTGGCAAGGGCCCGCAGAGGACCCCAGAGGAGGAGGCGCTG
TCCGCCAGGATAAAGGAGCACCAGGACGGCGCCGCCCGTCTCTCCAAGAC
CGAGGGTGAGCTATGATACGGTAGGCCTGATCTGTGCCGCATTGCGAGGA
TATGAGCTATGATGCGGTAGGCCTTGATCTGTGCCGCATTGCTGGGATAG
CAAAAGAGTAAGCGGAGCCACCCAAGACCTAACTAAAATCAGCACCGGCA
ACATGTTGGGTGTAGAGGAGGAGAAACACCTCGCCGGTTTTTTTACTGCT
CGTCTTTGTCACTCACGACGACGATAAGGGCGAACGAACACCCCCTTTTT
GGCTGGGTAGGGAAGGCGCCCCTCGACAGGCCCAACAAGGTCCCGATTTT
TTTGTTTTTTCTGCCGGGATTTCTTGGTGTGGGACAGCCGGGTTTTGATG
TTGGCGTCGTTGCCGCGGGGTGTCCTTGTCGAGCGGAAGCCCGGAACCAC
GGGACCCCCGGCGTTCTCTTCCAGGCACCGACCTGCCACTTGCGCCACAG
CATGTCCGGAATCGAAACACTCGCATCTGTAGCGGTGTTTCGCGTCGGCT
TCGTTTGAAGTTGGGTACATCTGTGCATGTCTTTTGTTTTCGGGTTTGCG
GTTTCGTGTCGTGTCAGTCGTGTGTGCCGTCATCGCTCTAGGAATAGCGC
TGGGAGGGGGTTCGTATCGCTCGATTGTTGACCGTTCTCCCGTCCCTTAC
CCCCACCCCCCCCTCGAATGACAGAGGTACGAAACCTCATGCAGTACAGC
ACTGGGTTCGGAGTTCTCAGCACCAACTCCAAGTCCATCGAAGGGTAAGC
GAGATAGCAGCATGTCATGCCAGCGGTGCTTGTTTTTTTTGGTTCGTCAA
AAGCAAAAAACACACCAACAAGAGTATTGCGTAGAAGCGCATTGAAGGTC
GTGCATCCAGTCCCCTCCCCAAATCGAGGCTTGTCGCCCTTGATCGGTTT
GTCTTTTGCTTCGTTTTTGGTCTCCCCGCCTTTTACGCTTGGCCAGTTTC
CGCCATCTGGTTCAAAGGGCCTTTTGGTCTGCGTGTACTCTATTATGCGC
AAACCTCTAGTTTTGGTTTTCAGGCGGCTTGTCCTGGTGCCGCTGGTTCC
CCGTAGGTTGTAGTTTCGTGCCTCATCCCTTCTTTCCTTTCGTTTCTTGT
CGTTTTTCCTGGACACTGCAGGCTGTTTCTCACTCTCTTTTTTTGTCTTG
TTGGTTTGTTAGCTTTAGGTAATACCATATTTTCCTTTTTTCTGTTGCCC
TCGATGTTCCTTCCCCTCGTGTTCCAACACTTCGCCCCCCTTGTTCTCCG
CCCCGCCCCAGTTACCCAAGTGGGTCCGTCGTGGGCTTCTCCCTGGACGA
AATGGGCAGGCCTCTTTTCGCCTTCAGCTCCCTGAGCGCGCACACCGGGG
ACTTAGAAGCCTCCTCTCACGCCAGCCTTACGGTCACGTCCGCCACCTTC
AAGGTAGAGTTGGCCTTTTTTAATATTTGTTTTTACGTCCTTCGTTGATT
GTCGGGCCGCGTCCCTGCCTTCGAAGTTGATTTATCCCTCTTGTGCGTGG
TGCTTTGCCTCTCTTTGTGGCGCTCTGCTCGTTTTTCGATGCTATGCTAT
GCTCTTTTGTGATGATTCTTGGCCCAATGATGTCATGCGCTTTTCTTGCG
GTATGTTGTGGTGTGTTCCAGGGAGCTGCCGACGGACGGGTCGGCTTGAT
CGGAGACGTCAACAAGGTAAGCACGGCGGTGAACCCCACCTCGACAGCTA
CGGCCTCGTGCCGATGGCTGCAGCAGCTAGCTAACTCGGGGTTGCGCTCG
TTCAGATGGCGGGCCGACTATTTCGCTTCGGCTTGCCCTCGTTCAAAGTG
GTCCACCAGCTATCCGTTGATTTGTTTTTGTCTCGATTGATCGATTTCAA
TAATGCCGCTTTCTTTTATCGACCCGCACTTATAATAGGTACCAGACGAG
GACCTCCCCAGCGTCCGCGAGATGTACAAGAAGAAGCACCCGAACGCGTA
CTGGGTGGACTTCGGCGACTTCCGACTCATGCGCATGGACACCATCAAGG
CAATGCGCTTCGTCGGGGGGTTCGCGATGGCGGGAGACGTCAAGCCAGAA
GGTGCCTACAGAGTTGTGAAAGAGTCAGCCCCCCCCCCCCTGTCAGCGGT
CAACATGTTTGCAACGTTGTGTGGCCGTTTCGGTTTTCCGTGGGTTGTTC
GACGCATGCCATCATTTAGATTTGCATAGATGGTGGACCATCTCTTCAAG
CTAACGGTTTGGTCCTTTGGATGGTTGCGGTGGGTTCGCGATGGTCCCGA
CGTTGATAACAACCCCCTTTTTTATTAGTGGAGCTTTGAAAGTCGACGCA
AGAAGGAAGGGGTGACGTCTGAGCCGTTACACTGTGCGTGTGTGGCGGTT
CCGAACACGGGAATAATTCGCCGCGAAGGCTTTTCCTCCTTTTCGGGATT
TTTTCGGCGCCGGTCGAGTCTCCTTTCATGTTCTAATGCCAACGAATTGT
GTTTTTTTTGTCTGTTTGTTCGCTTTCCCCCCACAGACTACCTGGAAACT
GCTCCCGATGCGGTCGCCGAGTTTTCGGCCCTGATTCTTGAGCACATGAA
CGACGACCACTCGGAGACCACGCGAGCCATGATCAAGCACTACATCACGG
GAGTGGAGGTACCGCTGCGTTCATTTTGTTGTCGGTAGTGGTGGTGGTGG
TGTGGTTGTTGTTGCTATTGTGACTTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATGGTGTTGTCGTT
GGTGTTGGTGTTGTCGCTGTTCGCAGCTGGCAACGGCCGAACTCACCCCC
CTCCAGCCTCCGTCCTCGCTCAAACCACGATTACTGTTGCTTTTATTGGC
GGTATTGGCGGTATTGGTCTTTCCCACAGGTGGCATCGGCCCAGATCACG
GCCGTGGATCGTCTCGGCATGTACGTCGTCGTTGGCATGCCAGACGGCCA
GTCCGGTAAGCTCCGCCTGCCCTTCCCTCGACCAGCCGAAAGCCGAAAGG
ACGTCAAAACCCTCATCGTGGAGATGACCCAAGCAGCCGCGGCTGCCGCC
CAGAAGTAGATTGCTGCGTGTAGTTGTGGTGGCTTGGTGACAGATCCTAC
TGCTGCGGGAAGGTAGCTGCTGCGGGAAAGGTAGAGAAGTGTCTAGCCTG
CTTCGGGGTTTGGTGTGGTGGCTTGGTGGCAGCCATGAACGCCGCCAGAA
TGGTGTCACCCCCGGTCGCATCGTGGTTCTTGTGTGTGTGTTGAATGTCC
TAGAGCGGTGCCCACATCTGAATCTAGCAATCTATCTTTAGGGGGCTCAT
ACCTGCTGTCCGGTTCCGTTTCCTCTTTTCGAGCCGGGGTTGGTGCCCCT
CTCTTGTTTGTGCAAGTCTATTGTGAGGGGAGGATCCGTGGAGGTGGCGG
TACCTACCTAGGTTACCTTCGAGCTATATTTCTGGGGATAGGCGCGCGTT
GGCCTCCCGCGTGAATTGCTTGTTTTTTGTGAACATTCAACATTTGTCCT
GCGCATAGTCTACGCCAAAGTTTCCCGTCATTTCACGTGGGCATTTTTTA
GTTTCGTCCCAAGCCCCTCTACGACAACAGCTGCGCACCGGGACGGTCGT
TGACTGCTGCGCATCATTGGCGAAACGACACCGTTTTTTGCACGGGGTTT
CTACAATGTGCAACATCACCGCGGACACTAAACTGCGAATATTTTTACTG
GGTGTCGCAGTGGGCGGTAGGAGATGATCTATTGAGCCGATTTAACGGGA
TGTGTTACCACTGTAC

Coding sequence (CDS) from alignment at C-linearis_contig10:1688376..1693491-

>mRNA_C-linearis_contig10.516.1 ID=mRNA_C-linearis_contig10.516.1|Name=mRNA_C-linearis_contig10.516.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2280bp|location=Sequence derived from alignment at C-linearis_contig10:1688376..1693491- (Chordaria linearis ClinC8C monoicous)
ATGCGCTCCTTCACCATCTGCGGGGCGTCCTCTTTGCTTCTCGCTGGTGC
TCGTGCTTTCACCGTCTCTCCGGCAGGCAAGATCGAGCCCCTTTTTTCTC
TCCCTTCTTATGCGCTCCTTCACCATCTGCGGGGCGTCCTCTTTGCTTCT
CGCTGGTGCTCGTGCTTTCACCGTCTCTCCGGCAGGCAAGATCGAGCCCC
TTTTTTCTCTCCCTTCTTCTTGCGCCCGGTTGTCTCTCGCGCAGAACGCC
TACCGCATCCCAACCCGAGGGTCGCTCTCTCGATTCCCCTCCGTCTCTTC
GCCCCCCGGTGGCCGTCGCGGACAGCAGCAGCAGCAGCAAAGCCGACTGA
GGATGGAGGCGGCGAGTGACAGCACGGCCGAGAAAAAGGAGGAGGCTTGC
GCCCGGTTGTCTCTCGCGCAGAACGCCTACCGCATCCCAACCCGAGGGTC
GCTCTCTCGATTCCCCTCCGTCTCTTCGCCCCCCGGTGGCCGTCGCGGAC
AGCAGCAGCAGCAGCAAAGCCGACTGAGGATGGAGGCGGCGAGTGACAGC
ACGGCCGAGAAAAAGGAGGAGGCAGGACATAGCCCCCCCAAGGCTACGGG
GCACGCTGCTGGCAAGGGCCCGCAGAGGACCCCAGAGGAGGAGGCGCTGT
CCGCCAGGATAAAGGAGCACCAGGACGGCGCCGCCCGTCTCTCCAAGACC
GAGGCAGGACATAGCCCCCCCAAGGCTACGGGGCACGCTGCTGGCAAGGG
CCCGCAGAGGACCCCAGAGGAGGAGGCGCTGTCCGCCAGGATAAAGGAGC
ACCAGGACGGCGCCGCCCGTCTCTCCAAGACCGAGGAGGTACGAAACCTC
ATGCAGTACAGCACTGGGTTCGGAGTTCTCAGCACCAACTCCAAGTCCAT
CGAAGGAGGTACGAAACCTCATGCAGTACAGCACTGGGTTCGGAGTTCTC
AGCACCAACTCCAAGTCCATCGAAGGTTACCCAAGTGGGTCCGTCGTGGG
CTTCTCCCTGGACGAAATGGGCAGGCCTCTTTTCGCCTTCAGCTCCCTGA
GCGCGCACACCGGGGACTTAGAAGCCTCCTCTCACGCCAGCCTTACGGTC
ACGTCCGCCACCTTCAAGTTACCCAAGTGGGTCCGTCGTGGGCTTCTCCC
TGGACGAAATGGGCAGGCCTCTTTTCGCCTTCAGCTCCCTGAGCGCGCAC
ACCGGGGACTTAGAAGCCTCCTCTCACGCCAGCCTTACGGTCACGTCCGC
CACCTTCAAGGGAGCTGCCGACGGACGGGTCGGCTTGATCGGAGACGTCA
ACAAGGGAGCTGCCGACGGACGGGTCGGCTTGATCGGAGACGTCAACAAG
GTACCAGACGAGGACCTCCCCAGCGTCCGCGAGATGTACAAGAAGAAGCA
CCCGAACGCGTACTGGGTGGACTTCGGCGACTTCCGACTCATGCGCATGG
ACACCATCAAGGCAATGCGCTTCGTCGGGGGGTTCGCGATGGCGGGAGAC
GTCAAGCCAGAAGGTACCAGACGAGGACCTCCCCAGCGTCCGCGAGATGT
ACAAGAAGAAGCACCCGAACGCGTACTGGGTGGACTTCGGCGACTTCCGA
CTCATGCGCATGGACACCATCAAGGCAATGCGCTTCGTCGGGGGGTTCGC
GATGGCGGGAGACGTCAAGCCAGAAGACTACCTGGAAACTGCTCCCGATG
CGGTCGCCGAGTTTTCGGCCCTGATTCTTGAGCACATGAACGACGACCAC
TCGGAGACCACGCGAGCCATGATCAAGCACTACATCACGGGAGTGGAGAC
TACCTGGAAACTGCTCCCGATGCGGTCGCCGAGTTTTCGGCCCTGATTCT
TGAGCACATGAACGACGACCACTCGGAGACCACGCGAGCCATGATCAAGC
ACTACATCACGGGAGTGGAGGTGGCATCGGCCCAGATCACGGCCGTGGAT
CGTCTCGGCATGTACGTCGTCGTTGGCATGCCAGACGGCCAGTCCGGTAA
GCTCCGCCTGCCCTTCCCTCGACCAGCCGAAAGCCGAAAGGACGTCAAAA
CCCTCATCGTGGAGATGACCCAAGCAGCCGCGGCTGCCGCCCAGAAGTAG
GTGGCATCGGCCCAGATCACGGCCGTGGATCGTCTCGGCATGTACGTCGT
CGTTGGCATGCCAGACGGCCAGTCCGGTAAGCTCCGCCTGCCCTTCCCTC
GACCAGCCGAAAGCCGAAAGGACGTCAAAACCCTCATCGTGGAGATGACC
CAAGCAGCCGCGGCTGCCGCCCAGAAGTAG