prot_C-linearis_contig10.477.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.477.1
Unique Nameprot_C-linearis_contig10.477.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length181
Homology
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 6.680e-32
Identity = 70/115 (60.87%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    1 MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDSRMQDAQS-FARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPWLGCRARGWRRLGKTLP 114
            MP+G AF +KDAAVLLYD +PS+EDEASAGG+V +LERWS++RS     RM DA + FARE LLDR  VRRP L+RW  Y+SSLD LRS D Y LK  WL     G    GKT P
Sbjct:  470 MPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRP 584          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 9.740e-28
Identity = 69/127 (54.33%), Postives = 83/127 (65.35%), Query Frame = 0
Query:    1 MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDSRMQDAQS-FARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPWLGCR---ARGW---RRLGKTLPIRDSAN 120
            +P+G AF VKDAAVLLYD  P +EDEAS GG+V  LERW+++RS     RM DA S FARE L+DR DVRRP ++R V  ISSL+ALRSI+ Y LK  W G +     GW   R   K L   D +N
Sbjct:  493 LPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESN 619          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: A0A6H5KQ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ93_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 6.680e-27
Identity = 58/89 (65.17%), Postives = 67/89 (75.28%), Query Frame = 0
Query:    1 MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDSRMQDAQS-FARERLLDREDVRRPTLRRWVTYISSLDALRS 88
            MP+G AF +KDAAVLL D  PS+EDEASAGG+V +LERWS++R      RM DA + FARE LLDR  VRRP L+RW  YISSLD LRS
Sbjct:   82 MPDGHAFSLKDAAVLLDDRPPSTEDEASAGGVVDVLERWSIIRPAQGTYRMHDAHTYFARECLLDRGHVRRPALKRWTRYISSLDVLRS 170          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.360e-25
Identity = 65/110 (59.09%), Postives = 75/110 (68.18%), Query Frame = 0
Query:    1 MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDSRM---------QDAQS-FARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPWLG 100
            +P+GR F VKDAAVLLYD  PS+EDEASA G+V ILERWSVLRS     RM          DA S FARE+L+DR DVRRP L RW   ISSLD LRS+  + ++  WLG
Sbjct:  490 LPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLG 599          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.880e-23
Identity = 61/109 (55.96%), Postives = 71/109 (65.14%), Query Frame = 0
Query:    2 PNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDSRMQDAQS-FARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPWL---GCRARGW 106
            P+G AF V+DAAVLLYD  P +EDEAS   +V  LERW+VLRS     RM DA S FARE L+D   VRRP ++RWV+ IS L+ LRS D Y LK  WL   G    GW
Sbjct:  327 PDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGW 435          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 7.640e-22
Identity = 59/110 (53.64%), Postives = 72/110 (65.45%), Query Frame = 0
Query:    1 MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDSRM---------QDAQS-FARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPWLG 100
            +P+GR F VKDAAVL+YD  PS+EDEASA G+V ILERWS L S     RM          DA S FARE+L+DR DV RP L RW   ISS+D LR++  + ++  WLG
Sbjct:  445 LPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRWHEVRDLWLG 554          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 1.500e-20
Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 0
Query:    1 MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRST-GRDSRMQDAQS-FARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPWL 99
            +P+ +   V DAA+LLYD  P++EDE S   ++ +LERWSVLRST      M D QS FAR  L+DR DVRR  LRRWV YISSLD +RS +   LK  WL
Sbjct:  388 LPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWL 488          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 6.000e-10
Identity = 44/102 (43.14%), Postives = 55/102 (53.92%), Query Frame = 0
Query:    2 PNGRAFPVKDAAVLLYDE---TPSSEDEASAGGMVGILERWSVLRSTGRDS-RMQDAQ-SFARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPW 98
            P+G AF V DAAVLL D     P+      A   + ILERW+VL        RM D    FAR+++ D+ DVR+P +RRW + IS LD     D YAL   W
Sbjct:  559 PDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIW 660          
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 1.220e-6
Identity = 42/107 (39.25%), Postives = 56/107 (52.34%), Query Frame = 0
Query:    1 MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDS--RMQDAQS-FARERLLDR------EDVRRPTLRRWVTYISSLDALRSIDGYALKRPW 98
            +PNG AF V DA++LL+       D  +AG +V  LERW+V+R    D   RM DA S FAR+ L          DVR   +RRW  ++S L  + S+D   L   W
Sbjct:  475 LPNGYAFRVSDASLLLFGAC-QGRDMENAGDVVADLERWAVVRLESSDGTYRMHDAHSEFARKILTSALGLGFAADVRELAVRRWSAHLSCLKTVLSLDVGLLLSLW 580          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FZW8_ECTSI6.680e-3260.87NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KRK8_9PHAE9.740e-2854.33NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KQ93_9PHAE6.680e-2765.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZY7_ECTSI1.360e-2559.09NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KYW3_9PHAE1.880e-2355.96NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A6H5KJ30_9PHAE7.640e-2253.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J759_9PHAE1.500e-2054.46NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KE50_9PHAE6.000e-1043.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU40_9PHAE1.220e-639.25NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:1067734..1068276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.477.1mRNA_C-linearis_contig10.477.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 1066509..1070276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.477.1 ID=prot_C-linearis_contig10.477.1|Name=mRNA_C-linearis_contig10.477.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=181bp
MPNGRAFPVKDAAVLLYDETPSSEDEASAGGMVGILERWSVLRSTGRDSR
MQDAQSFARERLLDREDVRRPTLRRWVTYISSLDALRSIDGYALKRPWLG
CRARGWRRLGKTLPIRDSANRDGRVRSLAQRIHRGRGVVPGVAGGSGRSD
DHLSPTARGREERTWGRRPPFRVEHFPPPS*
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