prot_C-linearis_contig10.441.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.441.1
Unique Nameprot_C-linearis_contig10.441.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length598
Homology
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: D7FTK3_ECTSI (Myb-like DNA-binding domain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK3_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.790e-88
Identity = 137/167 (82.04%), Postives = 151/167 (90.42%), Query Frame = 0
Query:  140 SRDGRRTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSRDAS 306
            SRDGRRTWTDAESDRLREVVEH +AG++RKNWQWVAA+              CKMRWERILNPGVKRGLWTKEEDQKLKEVAAA +YKWSHVAK+MGGRTYKQCRERYTNYLK+GLNVGPW+KEED+LLL+MHA++GNKWAEIAR+LKDRSENMIKNEYMKLSRDA+
Sbjct:   69 SRDGRRTWTDAESDRLREVVEHRSAGDSRKNWQWVAAK--------------CKMRWERILNPGVKRGLWTKEEDQKLKEVAAAMEYKWSHVAKLMGGRTYKQCRERYTNYLKEGLNVGPWTKEEDQLLLSMHAKVGNKWAEIARYLKDRSENMIKNEYMKLSRDAN 221          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A024GD30_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GD30_9STRA)

HSP 1 Score: 135 bits (339), Expect = 6.640e-30
Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 0
Query:  145 RTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSRDASHRRL 310
            R WT  E + LR  VE S  GE  +NW+ +A +V      GR   +QC  RW ++L PG+ +G WT EED KLK + A     W HVA M+ GRT KQCRER+ N+L   +N G +S+EEDR++L M AR+GN+W+ IA+HLK R+E+ +K  +  L R   HR L
Sbjct:  115 RRWTKQEDEALRLAVERS--GE--RNWKTIADQV-----PGR-NHTQCLQRWTKVLKPGLIKGHWTIEEDAKLKGLVANGIRNWGHVASMIPGRTSKQCRERWCNHLDPNINKGSYSEEEDRIILEMQARLGNRWSVIAQHLKGRTEDAVKIRWKSLKR--GHRSL 268          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: F0W430_9STRA (Myblike DNAbinding protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W430_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.770e-29
Identity = 73/159 (45.91%), Postives = 101/159 (63.52%), Query Frame = 0
Query:  145 RTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSR 303
            R WT  E + LR  VE S  GE  +NW+ +A +V      GR   +QC  RW ++L PG+ +G WT EED KLK + A     W HVA M+ GRT KQCRER+ N+L   +N G +S+EEDR++L M A++GN+W+ IA+HLK R+E+ +K  +  L R
Sbjct:  122 RRWTKQEDEALRLAVERS--GE--RNWKTIADQV-----PGR-NHTQCLQRWTKVLKPGLIKGHWTIEEDNKLKGLVANVIRNWGHVASMIPGRTSKQCRERWCNHLDPSINKGSYSEEEDRIILEMQAKLGNRWSVIAQHLKGRTEDAVKIRWKSLKR 270          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A7S4EQR6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQR6_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.570e-29
Identity = 71/166 (42.77%), Postives = 103/166 (62.05%), Query Frame = 0
Query:  147 WTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAF-DYKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMK-----LSRDAS 306
            WT+ E D LRE V    A    K+W+ +A R+      GR T  QC  RW+++L PG+ +G WT EED K+ E+     + KWS +A+ + GR  KQCRER+ N+L   +N G W+ +ED+LL+  H+ +GN+WAEIA+ LK R++N IKN +       +S+DAS
Sbjct:  170 WTEEEDDLLREAV----ANYGGKSWKKIAGRL-----TGR-TDVQCLHRWQKVLKPGLIKGPWTPEEDAKVVELVKVHGNKKWSFIARQLKGRLGKQCRERWYNHLNPDINKGEWTNDEDKLLIQAHSELGNRWAEIAKRLKGRTDNAIKNRWNSTLKRIMSKDAS 325          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A2V3J1G3_9FLOR (Transcription factor MYB3R-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G3_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 8.370e-29
Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = 0
Query:  141 RDGRRTWTDAESDRLREVV-EHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDY-KWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMKLSRDASHRR 309
            R  +  WT  E D LR VV EH     N KNW+ +A  +        +   QC  RW+++L PG+K+G WT+ ED  +  + A     KWS +AK + GR  KQCRER+ N+L   +N  PW++EE+R+L   H+RIGNKWA IA++L  R++N IKN Y    R A+ R+
Sbjct:  234 RSSKGGWTRDEDDMLRVVVMEH-----NEKNWKDIAKALNASFPGSSRNDVQCLHRWQKVLQPGLKKGPWTQHEDDTITRLVATLGANKWSLIAKQLPGRIGKQCRERWFNHLNPEINKDPWTEEEERILREAHSRIGNKWAVIAKYLPGRTDNAIKNHYNATQRRAATRK 399          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A6A7G5F5_9CRUS (Myb-related protein A n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G5F5_9CRUS)

HSP 1 Score: 132 bits (333), Expect = 9.270e-29
Identity = 65/153 (42.48%), Postives = 98/153 (64.05%), Query Frame = 0
Query:  147 WTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFD-YKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 298
            WT AE   L++ V  +N     KNW+    R+    G  +KT  QC  RW+++LNP + +G WT EED K+ E+   F   KWS +AK + GR  KQCRER+ N+L  G+  GPW+K+E++L+++ H R+GN+WAEI++ L  R++N +KN +
Sbjct:   41 WTPAEDRALKDAVVSNNG----KNWK----RIASSFGVNKKTDVQCLHRWQKVLNPELVKGPWTHEEDSKVLEMVDKFGPKKWSSIAKYLPGRIGKQCRERWHNHLNSGICKGPWTKDEEKLIVSAHNRLGNRWAEISKLLPGRTDNAVKNHW 185          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: F0Y8W2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8W2_AURAN)

HSP 1 Score: 121 bits (304), Expect = 1.300e-28
Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 0
Query:  147 WTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKE-VAAAFD--YKWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 298
            WT  E ++LR+ +E S   E  ++W  +AA   E    G ++P QC+ RWE++L  G+ +G WT  ED+ ++  V A  D  + WS VAK++ GR  KQ RER+ N+L   L   PW+  ED LL+++ A +GN+W EI+R  + RSEN IKN +
Sbjct:    1 WTKREDEKLRQTIEASGPDEGARDWAKIAAAAFE----GGRSPGQCEDRWEKVLKLGLVKGPWTPHEDEVVRRAVGAGVDAAFNWSEVAKLLPGRLTKQVRERWQNHLDPQLVKTPWTPNEDYLLVSLQAVLGNRWNEISRAFQGRSENAIKNRW 151          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A2R6W541_MARPO (Uncharacterized protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W541_MARPO)

HSP 1 Score: 125 bits (315), Expect = 1.500e-28
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 0
Query:  146 TWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYK-WSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 298
            +WT  E + LR  VE        +NW+ +AA +   S A      QC  RW+++LNP + +G W+KEED K+ E+   F  K W+ +A+ M GR  KQCRER+ N+L   +   PWS+EED +L+  H R+GN+WAEIA+ +  RS+N IKN +
Sbjct:   58 SWTAEEDETLRAAVEKFKG----RNWKQIAASLPNRSDA------QCLHRWQKVLNPILVKGYWSKEEDDKMLELVKTFGTKRWAAIARAMPGRNSKQCRERWCNHLDPKIKKEPWSEEEDMMLVMAHQRLGNRWAEIAKIIPGRSDNAIKNRW 201          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A7R9TWF4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TWF4_MICPS)

HSP 1 Score: 124 bits (310), Expect = 2.680e-28
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 0
Query:  133 GAAGGLNSRDGRRTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDYK-WSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 298
            G  GG   R  +  WT  E D LR  V H       KNW+ +A    E      +T  QC  RW+++LNP + +G WTKEED K+ E+  A   K WS +A+ + GR  KQCRER+ N+L   +    WS+EED+ L+  HA  GN+WAEIA+    R++N IKN +
Sbjct:   30 GRTGGPTRRSAKGGWTPDEDDILRRAVAHYKG----KNWKKIAEYFEE------RTDVQCLHRWQKVLNPELVKGPWTKEEDDKIIELVKALGAKQWSKIAQQLPGRIGKQCRERWYNHLNPEIKREEWSREEDQKLIVAHAEYGNRWAEIAKTFVGRTDNAIKNHW 186          
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Match: A0A2R5GJM5_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJM5_9STRA)

HSP 1 Score: 129 bits (323), Expect = 3.630e-28
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 0
Query:  144 RRTWTDAESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERILNPGVKRGLWTKEEDQKLKEVAAAFDY-KWSHVAKMMGGRTYKQCRERYTNYLKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEY 298
            R  WT  E D LRE V    A    KNW+      C  S    +T +QC  RW+++LNP +K+G W+ EED+ L++    +   KWS V+ ++ GR  KQCRER+ N+LK  +N  PWS EED L++ +   +GNKWA IAR L  R+EN +KN +
Sbjct:   49 RIPWTTEEDDILREAV----ARHKGKNWK------CVASALPNRTRAQCAHRWQKVLNPTIKKGAWSPEEDEMLQQALQRYGCGKWSRVSCLVPGRNGKQCRERWHNHLKPDVNKEPWSAEEDELIVKLRGELGNKWAAIARELPGRTENAVKNRW 194          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTK3_ECTSI1.790e-8882.04Myb-like DNA-binding domain n=1 Tax=Ectocarpus sil... [more]
A0A024GD30_9STRA6.640e-3046.39Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0W430_9STRA1.770e-2945.91Myblike DNAbinding protein putative n=1 Tax=Albugo... [more]
A0A7S4EQR6_9STRA6.570e-2942.77Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A2V3J1G3_9FLOR8.370e-2942.11Transcription factor MYB3R-3 n=1 Tax=Gracilariopsi... [more]
A0A6A7G5F5_9CRUS9.270e-2942.48Myb-related protein A n=1 Tax=Hirondellea gigas Ta... [more]
F0Y8W2_AURAN1.300e-2841.29Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A2R6W541_MARPO1.500e-2842.21Uncharacterized protein n=3 Tax=Marchantia polymor... [more]
A0A7R9TWF4_MICPS2.680e-2841.32Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A2R5GJM5_9STRA3.630e-2842.95Transcription factor MYB3R-4 n=1 Tax=Hondaea ferme... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 205..253
e-value: 5.9E-15
score: 65.7
coord: 143..202
e-value: 3.7E-5
score: 33.2
coord: 256..304
e-value: 3.0E-10
score: 50.1
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 258..300
e-value: 2.3E-11
score: 43.7
coord: 206..251
e-value: 9.9E-14
score: 51.3
NoneNo IPR availableGENE3D1.10.10.60coord: 205..257
e-value: 2.6E-17
score: 64.3
NoneNo IPR availableGENE3D1.10.10.60coord: 259..315
e-value: 1.4E-14
score: 55.6
NoneNo IPR availableGENE3D1.10.10.60coord: 145..204
e-value: 1.1E-8
score: 37.0
NoneNo IPR availablePANTHERPTHR45614:SF31MYB-LIKE PROTEIN Lcoord: 138..240
coord: 214..397
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 138..240
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 214..397
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 258..306
score: 12.317
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 201..255
score: 23.993
IPR017877Myb-like domainPROSITEPS50090MYB_LIKEcoord: 139..200
score: 8.989
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 145..210
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 203..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:237864..244157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.441.1mRNA_C-linearis_contig10.441.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 235917..244735 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.441.1 ID=prot_C-linearis_contig10.441.1|Name=mRNA_C-linearis_contig10.441.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=598bp
MPMPLLSSQESTGSFAGVSHPDAPFRQGASQRSQQEMEAVAPVPSSQGST
VRSIGRSGGVLDDDCEDIVIDNDYTDGTSGFLDDNEDESGMQSSTGNGRS
RSRAGKGSRGASPGKRGTLERSNTLDSVGSGSGAAGGLNSRDGRRTWTDA
ESDRLREVVEHSNAGENRKNWQWVAARVCEVSGAGRKTPSQCKMRWERIL
NPGVKRGLWTKEEDQKLKEVAAAFDYKWSHVAKMMGGRTYKQCRERYTNY
LKDGLNVGPWSKEEDRLLLTMHARIGNKWAEIARHLKDRSENMIKNEYMK
LSRDASHRRLKSDPDVLDGALPAADEDSKKVMKRNDEPMHPPQLKKRGAK
RKTGTPGSSSTSSTMSHDTTTTTTRTGSSTNPESFSASTPVGEATAPAAP
RSGGRSAQSPSQSQSQSQSAEPIDVGVGSGVGPGAVLNQQRQQVGLGWQS
AQPFDDRAGSDGGVDGGDNAAVSSAAAAMAAASATALDSLNLLLPGTIGS
AETLAHGSGVDFCDTGAGVAAGVPIGTSVGAACADGRVPAAAAADRAAYP
AGVGVGGAAGGDGGDGGGHPSNPNPHPQAAGTSGDGGLAGHGGAFMM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf