prot_C-linearis_contig10.440.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig10.440.1
Unique Nameprot_C-linearis_contig10.440.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length312
Homology
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BLAST of mRNA_C-linearis_contig10.440.1 vs. uniprot
Match: D7FTK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK2_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 4.780e-24
Identity = 124/297 (41.75%), Postives = 142/297 (47.81%), Query Frame = 0 
Query:    3 SSPVGSVESDFWLGHEDGDEHGEGPENDGCDPVEAAHAAVDRLMASTAPDATSTPHAGGGSXXXXXXXXXXXXXXGDGGSDAKLLEKLLFDGLGMQKVAAGGDASRLPTKSRRKARGSSS-------------------AADAGASPALS------FPTTPA------NPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYKKGKTAGVLSP--APSSASSTPLSALSSNGRSSSGGSGSTPQSVGGFSNSSPGSSISIASMTLAPSLWKLVERGETCPFPDCAFTVAFLEEKEKELA 266
            +SP GSVESDFW G  +GD+     ENDG DP+EAAHAAVDR  A       ST                      DG  D +LLE LL DGLG++ + AG     +   +    RG+S                    A  +G    LS      FP TPA      +                      XXXXXXX  +K +    LSP  A SSASSTPLS LSSN         STP+S G  S +S GS   IA+MTL PSLWKLVERGETCPFPDCAFTVAF E KE   A
Sbjct:   63 TSPAGSVESDFW-GEGEGDDV---MENDGFDPMEAAHAAVDRNDACGQHMQPST----------------------DG--DTRLLEDLLLDGLGLRHMEAGPSGGVVAATAGAGDRGASRSXXXXXXXXXXXXXXXSRPAKASGGGGILSNCALDDFPATPATNKNASDTDKPGTKAKGDHGTGAGGRASGXXXXXXXXXRKNR----LSPGSASSSASSTPLSVLSSNS--------STPRSAGDGSQTSLGS---IAAMTLNPSLWKLVERGETCPFPDCAFTVAFFERKEARKA 316
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.440.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTK2_ECTSI4.780e-2441.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:233066..235878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.440.1mRNA_C-linearis_contig10.440.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig10 233066..235878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig10.440.1 ID=prot_C-linearis_contig10.440.1|Name=mRNA_C-linearis_contig10.440.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=312bp
MASSPVGSVESDFWLGHEDGDEHGEGPENDGCDPVEAAHAAVDRLMASTA
PDATSTPHAGGGSGGGSGGGGGGGGSHGDGGSDAKLLEKLLFDGLGMQKV
AAGGDASRLPTKSRRKARGSSSAADAGASPALSFPTTPANPNANGNADTG
HGRRKNGSGSSSSSNSNSNRYKKGKTAGVLSPAPSSASSTPLSALSSNGR
SSSGGSGSTPQSVGGFSNSSPGSSISIASMTLAPSLWKLVERGETCPFPD
CAFTVAFLEEKEKELAKKRKAHSDSQGGGQPGAGTLVEIENFNAGGPSLL
NGSAADARALVD
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