Homology
BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Match:
D8LJU2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU2_ECTSI)
HSP 1 Score: 103 bits (257), Expect = 2.410e-22
Identity = 72/185 (38.92%), Postives = 82/185 (44.32%), Query Frame = 0
Query: 1 MVYQRA----------GGRERCVGCGFGKGQFQVQY-DDDRDGSGRGYCSLDCYTSAKVTGRNLQTQQSRGRGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPWPTGFLVDAPPSPKPWRGRTL----SQDNMSWRTV-----STGNLSVA-----DESFSQSSVADWHGADSEDGETSIGSG 160
MVYQR G RERC GCG+G GQFQV+Y +D DG GRGYCSLDCYTSAK G L+DAPP PKPWR + Q ++ W + STG D S +SSVADW DSEDGETS+GSG
Sbjct: 1 MVYQRTASPAQFSSGRGSRERCRGCGYGLGQFQVEYASNDDDGLGRGYCSLDCYTSAK--------------------------------------------------GLLLDAPPEPKPWRRTAIMSRRQQRDLGWTSTVLPGSSTGTFGAGGAAGDDTSSQESSVADWQTVDSEDGETSVGSG 135
BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Match:
A0A6H5KT65_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT65_9PHAE)
HSP 1 Score: 87.4 bits (215), Expect = 9.660e-18
Identity = 48/74 (64.86%), Postives = 51/74 (68.92%), Query Frame = 0
Query: 1 MVYQRA----------GGRERCVGCGFGKGQFQVQY-DDDRDGSGRGYCSLDCYTSAKVTGRNLQTQQSRGRGG 63
MVYQR G RERC GCG+G GQFQV+Y +D DG GRGYCSLDCYTSAKVTGR LQ Q R RGG
Sbjct: 1 MVYQRTASPAQSSSGRGSRERCRGCGYGLGQFQVEYASNDDDGLGRGYCSLDCYTSAKVTGRALQ-HQPRARGG 73
BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Match:
A0A6H5KTY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY8_9PHAE)
HSP 1 Score: 67.8 bits (164), Expect = 1.130e-8
Identity = 40/83 (48.19%), Postives = 48/83 (57.83%), Query Frame = 0
Query: 92 PQP--WPTGFLVDAPPSPKPWRGRTL----SQDNMSWRTV-----STGNLSVA----DESFSQSSVADWHGADSEDGETSIGS 159
PQP WPTG L+DAPP PKPWR + Q ++ W + STG + D S +SSVADW DSEDGETS+GS
Sbjct: 11 PQPLSWPTGLLLDAPPEPKPWRRTAIMSRRQQRDLGWTSAVLSGNSTGTFGASAAGDDTSSQESSVADWQTVDSEDGETSVGS 93
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig98.17134.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
50 100 150 200 250 300 350 400 Expect = 2.41e-22 / Id = 38.92 Expect = 9.66e-18 / Id = 64.86 Expect = 1.13e-8 / Id = 48.19 Sequence D8LJU2_ECTSI A0A6H5KT65_9PHAE A0A6H5KTY8_9PHAE
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Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-linearis_contig98.17134.1 ID=prot_C-linearis_contig98.17134.1|Name=mRNA_C-linearis_contig98.17134.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=406bp MVYQRAGGRERCVGCGFGKGQFQVQYDDDRDGSGRGYCSLDCYTSAKVTG RNLQTQQSRGRGGDGGGMLYNQQHRRGAGGGGGARGHGGGGPQPWPTGFL VDAPPSPKPWRGRTLSQDNMSWRTVSTGNLSVADESFSQSSVADWHGADS EDGETSIGSGNGSGSGNGSGSGSAGDAIVRGGVGVAAADGLPSQQQQQQG PPRNNNDNLGNLGNHRYDGDGSGSGGSAARRNGGSGGTIAPPLGGGNRNN GEAVHHGGGQMDHRLEKGDSSGNGDGDSGSMGFAGAGQPAAGVAGATRGE AATHRPPLVPFAPIPRLRAFPAQRRIHGTYGPGADGDSGGGGRKVPGRTV AFAAPPAQASPPRRPPGVGRGGAVVDVLPLRPRPVAAAAGRQQPVEAAAA AGVCGG back to top