prot_C-linearis_contig93.16900.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig93.16900.1
Unique Nameprot_C-linearis_contig93.16900.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length145
Homology
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BLAST of mRNA_C-linearis_contig93.16900.1 vs. uniprot
Match: A0A6H5JN80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN80_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.230e-56
Identity = 91/129 (70.54%), Postives = 106/129 (82.17%), Query Frame = 0 
Query:   15 SRIFPLPEQTVFLPSFDNEDMTKMRRNDRFAYGSVATMRVVMNRVAMLLEAGAGKYRGNIDSEWVLGHHLLEHQISVHMLDLLVTRIRLTRDIPFYDHRLVKEACQSGEDPMACSIMEADFKFPADGGA 143
            +R  PLPE TVFLPSFD E   ++R+NDRFAYGS+ TMRVVMNR+A LL A  G+  G IDSE+VLGHHL ++ ISV MLDLL+TRIRLTRDIP YDHRLV+EAC SGEDPMAC +++A FKFP DGGA
Sbjct:  238 TRTLPLPEHTVFLPSFDAELAAQVRKNDRFAYGSMTTMRVVMNRLATLLAADTGQLTGEIDSEYVLGHHLRKNDISVQMLDLLLTRIRLTRDIPMYDHRLVEEACLSGEDPMACRMVDAGFKFPVDGGA 366
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig93.16900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN80_9PHAE2.230e-5670.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig93contigC-linearis_contig93:193402..195767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig93.16900.1mRNA_C-linearis_contig93.16900.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig93 192760..196663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig93.16900.1 ID=prot_C-linearis_contig93.16900.1|Name=mRNA_C-linearis_contig93.16900.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=145bp
MSHHNKTTMKNVERSRIFPLPEQTVFLPSFDNEDMTKMRRNDRFAYGSVA
TMRVVMNRVAMLLEAGAGKYRGNIDSEWVLGHHLLEHQISVHMLDLLVTR
IRLTRDIPFYDHRLVKEACQSGEDPMACSIMEADFKFPADGGAS*
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