prot_C-linearis_contig92.16882.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig92.16882.1
Unique Name	prot_C-linearis_contig92.16882.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	165

Homology

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: A0A6H5K718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K718_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 8.710e-61
Identity = 100/162 (61.73%), Postives = 124/162 (76.54%), Query Frame = 0

Query:    3 MQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVVVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKLVEG 164
            + WH+AT V VRFRGHKGDQ+++G+ VTRVR+V  GA SQIGAGGGAVA+LVELM+CH+ALP  APLCS+R +      V GY +AL A  QI+E AG +PK  GLHSLRIG AT +AAGG +PDR+++ EGRWK+ SG+ K YTRNN+ D   VS KL +G
Sbjct:  129 LHWHKATGVRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYSKALSA--QIVEKAGGNPKQVGLHSLRIGAATTLAAGGDVPDRIIQGEGRWKEGSGTFKIYTRNNMVDVDMVSRKLAKG 288

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 4.950e-59
Identity = 101/162 (62.35%), Postives = 125/162 (77.16%), Query Frame = 0

Query:    3 MQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVVVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKLVEG 164
            + WH+AT V VRFRGHKGDQ+++G+ VTRVR+V  GA SQIGAGGGAVA+LVELM+CH+ALP  APLCS+R +      V GY +AL A RQI++ AG DPK  GLHSLRIG AT +AAGG +PDR+++ EGRWK+ SG+ K YTRNN+ D   VS KL +G
Sbjct:  746 LHWHKATGVRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVWGYPKALSALRQIVDKAGGDPKQVGLHSLRIGAATTLAAGGDVPDRIIQSEGRWKEASGTFKIYTRNNMVDIDMVSRKLAKG 907

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: A0A6H5KCI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI7_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 7.820e-45
Identity = 91/159 (57.23%), Postives = 109/159 (68.55%), Query Frame = 0

Query:    3 MQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVVVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKL 161
            M W QA RVE+RFRGHKGDQ Q G    R RD V G RS   A GGAVAL+V  +SCH  LP SAPL SYR   EV   VL Y +AL+A R+I+E +G +PK F LHSLRIGGA+ +AAGG + +RV++REGRWK  S + K YT NN +D+  VS  L
Sbjct:  285 MHWQQADRVEIRFRGHKGDQGQIGDVRARTRDEVHGPRSGYRANGGAVALMVASLSCHATLPDSAPLSSYRSGQEVK--VLKYDQALRALREIVERSGRNPKDFALHSLRIGGASTLAAGGAVSERVIQREGRWK--SDAYKVYTVNNSEDSQRVSRTL 439

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: A0A6H5JL16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL16_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.800e-33
Identity = 61/106 (57.55%), Postives = 72/106 (67.92%), Query Frame = 0

Query:   57 MSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKLV 162
            M+CH+ALP  APLCS R +      V GY +AL A RQI+E AG DPK  GLHSLRIG  T +AAGG +PDR  +REGRWK+ S +LK  TRNN+ D   VS KL 
Sbjct:    1 MACHLALPEDAPLCSCRCRRSKTIKVWGYSKALSALRQIVEEAGGDPKQVGLHSLRIGATTTLAAGGDVPDRTTQREGRWKEGSNTLKICTRNNMVDVDMVSRKLA 106

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: A0A6H5K297_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K297_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.200e-14
Identity = 50/110 (45.45%), Postives = 67/110 (60.91%), Query Frame = 0

Query:   53 LVELMSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKLV 162
            +VEL+S +  LP  APL ++   G+    +    +A  A RQ++ LAG  P+ + LHSLRIGGAT +AAGG  P+ V+ REGRW  +S S + Y RN   DAS VS  L 
Sbjct:    1 MVELLSLYTFLPSHAPLVAFGV-GQGQWAMWTKCQATVALRQVVALAGLQPEEYALHSLRIGGATFLAAGGASPE-VLRREGRWSGES-SHQCYVRNVGGDASWVSEVLA 107

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: A0A6H5K3G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G1_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 5.650e-11
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    7 QATRVEVRFRGHKGDQTQRGSSVTRVRDVVVGARSQIGAGGGAVALLVELMSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAG 100
            +A RVEVRFR  KGDQ ++G+  TR R    G    +  GGGAV +++EL+SC   LP SAPL ++   GE    V   R A +A RQ++ LAG
Sbjct:  237 EADRVEVRFRSSKGDQFRKGAVCTRARP---GPPQSVECGGGAVDVMIELLSCFPVLPSSAPLVAFGT-GEGRWSVWTRRHATEALRQVVSLAG 326

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: A0A6H5KE53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE53_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.760e-9
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 0

Query:   87 RALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKLV 162
            +A  A RQ++ LAG  P+ + LHSLRIGGAT +AA G  P+ V+ REGRW  +S S + Y RN   DAS VS  L 
Sbjct:   36 QATVALRQVVALAGLQPEEYALHSLRIGGATFLAAEGASPE-VLRREGRWSGES-SHQCYVRNVGGDASWVSEVLA 109

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: UPI0018D9EF2A (uncharacterized protein LOC119719490 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9EF2A)

HSP 1 Score: 62.4 bits (150), Expect = 1.840e-8
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0

Query:   83 LGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKL 161
            L Y R L  F+  +   G +PK FGLHSLR GGATA A  G +PDR+ ++ GRW+ ++     Y   +L+D  +VS  L
Sbjct:  233 LSYSRCLDIFKSALSSVGVNPKRFGLHSLRAGGATAAARIG-VPDRLFKKHGRWRSETAK-DGYVHESLEDRLSVSKML 309

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: UPI00148A347B (uncharacterized protein LOC117682718 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A347B)

HSP 1 Score: 59.7 bits (143), Expect = 4.490e-8
Identity = 41/107 (38.32%), Postives = 57/107 (53.27%), Query Frame = 0

Query:   55 ELMSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKL 161
            E + C I+  GS      R+K       L Y R  + F +      D+ K++GLHSLR GGATA A  G IPDR+ +R GRW+ +S     Y ++ L +  +VS KL
Sbjct:   73 EYVFCAISKSGSGYRLRNREKP------LSYTRVRELFIEAFTGIVDNIKVYGLHSLRSGGATASAVRG-IPDRIFKRHGRWRSESAK-DGYVQDPLSERLSVSKKL 171

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BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Match: UPI001458CFAC (integrase/recombinase xerD homolog n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458CFAC)

HSP 1 Score: 59.7 bits (143), Expect = 1.410e-7
Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 0

Query:   81 VVLGYRRALKAFRQIIELAGDDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNNLQDASAVSSKL 161
            V L Y RA +   + +E  G D  LFG+HSLR GGATA AA G + DR+ ++ GRWK +      Y R  + D  +VS  L
Sbjct:  198 VRLSYTRAREILLEALEAVGLDKTLFGVHSLRSGGATAAAAAG-VSDRLFKKHGRWKSEKAK-DGYVRERVHDLLSVSQHL 276

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot

BLAST of mRNA_C-linearis_contig92.16882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K718_9PHAE	8.710e-61	61.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KTP7_9PHAE	4.950e-59	62.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KCI7_9PHAE	7.820e-45	57.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JL16_9PHAE	2.800e-33	57.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K297_9PHAE	2.200e-14	45.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3G1_9PHAE	5.650e-11	45.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KE53_9PHAE	1.760e-9	51.32	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
UPI0018D9EF2A	1.840e-8	43.04	uncharacterized protein LOC119719490 n=1 Tax=Patir...	[more]
UPI00148A347B	4.490e-8	38.32	uncharacterized protein LOC117682718 n=2 Tax=Crass...	[more]
UPI001458CFAC	1.410e-7	43.21	integrase/recombinase xerD homolog n=1 Tax=Pecten ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013762	Integrase-like, catalytic domain superfamily	GENE3D	1.10.443.10		coord: 2..150 e-value: 5.2E-11 score: 44.7
None	No IPR available	PANTHER	PTHR34605	FAMILY NOT NAMED	coord: 68..158
IPR011010	DNA breaking-rejoining enzyme, catalytic core	SUPERFAMILY	56349	DNA breaking-rejoining enzymes	coord: 12..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig92	contig	C-linearis_contig92:435075..435569 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig92.16882.1	mRNA_C-linearis_contig92.16882.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig92 434067..436000 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig92.16882.1 ID=prot_C-linearis_contig92.16882.1|Name=mRNA_C-linearis_contig92.16882.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=165bp
MSMQWHQATRVEVRFRGHKGDQTQRGSSVTRVRDVVVGARSQIGAGGGAV
ALLVELMSCHIALPGSAPLCSYRKKGEVGTVVLGYRRALKAFRQIIELAG
DDPKLFGLHSLRIGGATAMAAGGQIPDRVVEREGRWKQKSGSLKKYTRNN
LQDASAVSSKLVEG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013762	Integrase-like_cat_sf
IPR011010	DNA_brk_join_enz