prot_C-linearis_contig92.16856.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig92.16856.1
Unique Nameprot_C-linearis_contig92.16856.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length151
Homology
BLAST of mRNA_C-linearis_contig92.16856.1 vs. uniprot
Match: A0A6H5KV31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV31_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 1.420e-67
Identity = 106/128 (82.81%), Postives = 114/128 (89.06%), Query Frame = 0
Query:    1 MLFAKDGGMTNPHVDVQSVPGETGTIIHMPAAGIIRKVHHADTQGPAKQAIVVHADDMSRVIETLKIDTGKESTSQYSGKLQTLPEFARVLRGAGIRLVVMNFPARCSYTLPAKCAHVFNTIGLVESS 128
            MLFAKDGGMTNPHVDVQSVPG TGTIIHMPAAG+IR+V+HAD QGPAKQAIVVHADDMSRVIETL+I+TGKES SQY G  +TL EFARVLR  GIR VV+NFP RCSY LPA+CAH F TIGLVESS
Sbjct:  211 MLFAKDGGMTNPHVDVQSVPGGTGTIIHMPAAGVIRRVNHADAQGPAKQAIVVHADDMSRVIETLQINTGKESASQYGGPPRTLTEFARVLRNEGIRFVVINFPVRCSYALPARCAHAFVTIGLVESS 338          
BLAST of mRNA_C-linearis_contig92.16856.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.030e-51
Identity = 94/132 (71.21%), Postives = 106/132 (80.30%), Query Frame = 0
Query:    1 MLFAKDGGMTNPHVDVQSVPGETGTIIHMPAAGIIRKVHHADTQGPAKQAIVVHADDMSRVIETLKIDTGKESTSQYSGKLQTLPEFARVLRGAGIRLVVMNFPARCSYTLPAKC----AHVFNTIGLVESS 128
            MLFAKDGGMTNPHVDVQSVPG TG IIHMPAAG+IR+V++ +   PAKQAIVVHADDMSRVIETLKI+T KES SQY G  +TLPEFARVL+  GIR VVMNFP+RCSY LPA+     AH     GL+ S+
Sbjct:  453 MLFAKDGGMTNPHVDVQSVPGGTGRIIHMPAAGVIRRVNYVEENRPAKQAIVVHADDMSRVIETLKINTKKESASQYGGPPRTLPEFARVLKSKGIRFVVMNFPSRCSYALPARPSFMRAHELALRGLLHSN 584          
BLAST of mRNA_C-linearis_contig92.16856.1 vs. uniprot
Match: D7G2S5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2S5_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 2.650e-25
Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 0
Query:    5 KDGGMTNPHVDVQSVPGETGTIIHMPAAGIIRKVHHADTQGPAKQAIVVHADDMSRVIETLKIDTGKESTSQYSGKLQTLPEFARVLRGAGIRLVVMNFPARCSYTLPAKCAHVFNTIGLVES 127
            + GG+T+ HVD Q V GE    +++PAAG +R V+   + GPAK+AI++ A DM RV++ L +D  K S+SQY+G +  L   A  LR   IR VV++FP  CSY +PA+CAH+F T+ LVES
Sbjct:  491 RTGGVTHSHVDPQMVHGEH---LYLPAAGTMRSVNRRGS-GPAKRAILMCAHDMDRVVDLLGLDVNKPSSSQYTGAIVDLEGLATRLRVNSIRFVVVDFPEYCSYAIPARCAHMFVTLRLVES 609          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig92.16856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KV31_9PHAE1.420e-6782.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP46_ECTSI1.030e-5171.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2S5_ECTSI2.650e-2547.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig92contigC-linearis_contig92:87510..87962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig92.16856.1mRNA_C-linearis_contig92.16856.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig92 86847..87962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig92.16856.1 ID=prot_C-linearis_contig92.16856.1|Name=mRNA_C-linearis_contig92.16856.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=151bp
MLFAKDGGMTNPHVDVQSVPGETGTIIHMPAAGIIRKVHHADTQGPAKQA
IVVHADDMSRVIETLKIDTGKESTSQYSGKLQTLPEFARVLRGAGIRLVV
MNFPARCSYTLPAKCAHVFNTIGLVESSVGLAPCFPSKDGLFGMMLVLFW
*
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