prot_C-linearis_contig91.16835.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16835.1
Unique Nameprot_C-linearis_contig91.16835.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length309
Homology
BLAST of mRNA_C-linearis_contig91.16835.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 4.850e-64
Identity = 133/295 (45.08%), Postives = 169/295 (57.29%), Query Frame = 0
Query:    3 QVHKLCAQACSFGPRTVARIATLLRPMIKGRIMTAPGEADPQIAVVEETIRARGADVMVYGNDSDLAVLGVRKLLHKI-KERHGVLTGWFYDLRLLIEPSTWVFTKDSPPHAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYPMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGKPTALGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQ 296
            +V+KL + AC+F  R  A IAT LR  I G +  APGEADPQ+ V ++   A G +V VY NDSDL VLGVR LL ++ K   G L G     RLL +P+ W F +    H +LRQLHG+    DE    TP   P A R R V + M+ GNDFAKF+NVGP+ AA+LA            ++ F+ VV  L + ++  SKE D+P A   VE +LR  H MF   VVW P +G LQH SGA ++EDIT  TG      TL  S +A  +  G V P  G EW+PPLG A  + Q
Sbjct:  325 EVNKLASAACAFDGRVTAEIATRLRARIGGEVYIAPGEADPQLVVFQDIHLATGPNVYVYANDSDLTVLGVRDLLVEVVKNTRGELIGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHTPVDEGLDYTPLPEPTA-RRRLVLFAMIVGNDFAKFKNVGPVTAARLAFVDAASGVWATSLLPFDAVVGDLASRLLVESKEEDTPAAWREVEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTSEDITRHTG------TLELSPLASGVARGDVCPLTGGEWDPPLGTAQAKGQ 612          
BLAST of mRNA_C-linearis_contig91.16835.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 1.850e-60
Identity = 124/295 (42.03%), Postives = 166/295 (56.27%), Query Frame = 0
Query:    3 QVHKLCAQACSFGPRTVARIATLLRPMIKGRIMTAPGEADPQIAVVEETIRARGADVMVYGNDSDLAVLGVRKLLHKI-KERHGVLTGWFYDLRLLIEPSTWVFTKDSPPHAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYPMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGKPTALGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQ 296
            +++KL + AC+F  R  A IAT LR  I+G +  APGEADPQ+ V ++   A GA+V VY NDSDL VLGVR LL ++ K   G L G     RLL +P+ W F +    H +LRQLHG+    DE    TP   P A R R + + ++ GNDFAKF+NVGP+ AA+LA    +       ++ F+ VV  L + ++  S+E D+P  R   E +LR  H MF   VVW P +G LQH SGA + E+IT         GT   S +A  +      P  G EW+PPLG A  + Q
Sbjct:   80 EINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGEADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDLLVEVVKNARGELVGRCVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTPLPEPTA-RRRLLLFAIIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRH------AGTSELSPLASRVARRDACPLTGREWDPPLGTAQAKGQ 367          
BLAST of mRNA_C-linearis_contig91.16835.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 6.030e-48
Identity = 115/290 (39.66%), Postives = 151/290 (52.07%), Query Frame = 0
Query:    3 QVHKLCAQACSFGPRTVARIATLLRPMIKGRIMTAPGEADPQIAVVEETIRARGADVMVYGNDSDLAVLGVRKLLHKI-KERHGVLTGWFYDLRLLIEPSTWVFTKDSPPHAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYPMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDITNATGKPTALGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQA 291
            +++KL + AC+F  R  A IAT LR  I+G +  APGEADPQ+AV ++   A GA+V VY NDSD  VLGV  LL ++ K   G L G     RLL +P+TW F +       LRQLHG+    DE F  TP   P A R R + + ++ G DFAKF+NVGP+ AA+LA    +  +          + E+   G         SP  R            + R  VVW P +G LQH SGA + E+IT  TG      TL  S +A  +  G +    G EW+PPLG A
Sbjct:   53 EINKLASAACAFDGRVTAEIATRLRARIRGEVNIAPGEADPQLAVFQDIHLATGANVYVYANDSDFTVLGVLDLLVEVVKNARGELVGRCVRQRLLFQPTTWSFLRSGDVRGRLRQLHGIHQPVDEGFDYTPLPEPTA-RRRLLLFAIIVGKDFAKFKNVGPVTAARLAFVDTESVSGRHLCYHSMRLWETWPQGCWW------SPGRRTR----------LLRGPVVWNPLSGELQHLSGASTREEITRHTG------TLELSPLASRVARGDICLLTGREWDPPLGTA 319          
BLAST of mRNA_C-linearis_contig91.16835.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 8.480e-41
Identity = 88/209 (42.11%), Postives = 124/209 (59.33%), Query Frame = 0
Query:    3 QVHKLCAQACSFGPRTVARIATLLRPMIKGRIMTAPGEADPQIAVVEETIRARGADVMVYGNDSDLAVLGVR-KLLHKIKERHGVLTGWFYDLRLLIEPSTWVFTKDSPPHAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYPMVAGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRLSKEGDSPEAR 210
            +++KL + AC+F  R  A IAT LR  I+G +  APG+ADPQ+ V ++   A GA+V VY NDSDL VLGVR +L+  +K   G L G     RLL +P+ W F +    H +LRQLHG+    DE    TP L     R R + + ++ GNDFAKF+NVGP+ AA+LA    +       ++ F+ VV  L + ++  S+E D+P AR
Sbjct:   53 EINKLASAACAFDGRVTAEIATRLRARIRGEVYIAPGKADPQLVVFQDIHLATGANVYVYANDSDLTVLGVRDRLVEVVKNARGELVGRSVRQRLLFQPTAWSFLRSGDAHGWLRQLHGIHQPVDEGLDYTP-LPEPTGRRRLLLFAVIVGNDFAKFKNVGPVTAARLAFVDTESGVWAASLLPFDAVVGDLASRLLVESREEDTPAAR 260          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KVY6_9PHAE4.850e-6445.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G0K2_ECTSI1.850e-6042.03Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=... [more]
D7FZU5_ECTSI6.030e-4839.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4G5_ECTSI8.480e-4142.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 17..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:481943..483370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16835.1mRNA_C-linearis_contig91.16835.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 479961..483511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16835.1 ID=prot_C-linearis_contig91.16835.1|Name=mRNA_C-linearis_contig91.16835.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=309bp
MAQVHKLCAQACSFGPRTVARIATLLRPMIKGRIMTAPGEADPQIAVVEE
TIRARGADVMVYGNDSDLAVLGVRKLLHKIKERHGVLTGWFYDLRLLIEP
STWVFTKDSPPHAFLRQLHGLPPEPDEKFISTPPLGPEAVRERFVHYPMV
AGNDFAKFQNVGPIAAAKLALPRVQDRASGQPVVRFEEVVESLVAGVVRL
SKEGDSPEARAAVEKKLRVAHAMFRHAVVWEPDTGLLQHRSGAQSTEDIT
NATGKPTALGTLRFSSIACDIVWGTVSPTDGEEWNPPLGQAPTELQRPDG
PVKRTGPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029060PIN-like_dom_sf