prot_C-linearis_contig91.16809.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16809.1
Unique Nameprot_C-linearis_contig91.16809.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length423
Homology
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BLAST of mRNA_C-linearis_contig91.16809.1 vs. uniprot
Match: D7FP24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP24_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 2.730e-98
Identity = 169/207 (81.64%), Postives = 176/207 (85.02%), Query Frame = 0 
Query:   24 MEGRSDGGGVGGIG-GGAGSSSRFISQIFWPEHCLSLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLDQTERALEILSSDPRCRTLNDFCSSEGAPPTVLGEWLPNGRD------------------YYXXXXXXXXXXXXXXXXXQSANIWLTVGQKAGRPVLRSLYCCGCAYRTCCYVVFYRPCNPDVLEYLPTIKKNASA 211
            ME RSDGG  GGIG  G+ SSSRFISQIFWPEHCL+LGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLDQTERALE+LS+DPRCRTLNDFCSS+GAPPTVLGEWLPNG                      XXXXXXXXXXXXXXXXXQSANIWLTVGQ  GRPVLRSLYCCGCAYRTCCYVV YRPCNPDVLEYLPT+KKNAS+
Sbjct:    1 MEARSDGGSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLDQTERALELLSADPRCRTLNDFCSSDGAPPTVLGEWLPNGHSRPQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSANIWLTVGQSRGRPVLRSLYCCGCAYRTCCYVVLYRPCNPDVLEYLPTVKKNASS 207
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BLAST of mRNA_C-linearis_contig91.16809.1 vs. uniprot
Match: A0A6H5K5Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y4_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 7.860e-33
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 0 
Query:   24 MEGRSDGGGVGGIG-GGAGSSSRFISQIFWPEHCLSLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLDQ 95
            ME RSDGG  GGIG  G+ SSSRFISQIFWPEHCL+LGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTL Q
Sbjct:    1 MEARSDGGSGGGIGFAGSSSSSRFISQIFWPEHCLNLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLAQ 73
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP24_ECTSI2.730e-9881.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5Y4_9PHAE7.860e-3387.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:196822..201238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16809.1mRNA_C-linearis_contig91.16809.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 196822..201238 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16809.1 ID=prot_C-linearis_contig91.16809.1|Name=mRNA_C-linearis_contig91.16809.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=423bp
EGRWGCTEERGREGHTRPKYPPQMEGRSDGGGVGGIGGGAGSSSRFISQI
FWPEHCLSLGGRRGYLIGWNTAAFKCLVVTLVTVDAETGLPTLDQTERAL
EILSSDPRCRTLNDFCSSEGAPPTVLGEWLPNGRDYYYDGGAASAAAEAA
AARRQSANIWLTVGQKAGRPVLRSLYCCGCAYRTCCYVVFYRPCNPDVLE
YLPTIKKNASAYHNHGGGGGGDDEDGDGGGGTNVDGKGSSRDQSPVPSSA
GAGASGGGGGGGGGPDAAVGVAGHHPAGGGDAITGGAASAFGIGDADAEV
GRDDNGGRPVGRPNDHHPSNATPDNNPTSTSRNHITNTARSSRGPYQGTT
PSTPTTTTTSNKTPALPSTTTAGGASKGGGVILRRGYIGHGTALVSPSAR
EGGNPSGVARDATGLLMGGGAGG
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