prot_C-linearis_contig91.16802.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16802.1
Unique Nameprot_C-linearis_contig91.16802.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length752
Homology
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BLAST of mRNA_C-linearis_contig91.16802.1 vs. uniprot
Match: D8LD72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD72_ECTSI)

HSP 1 Score: 406 bits (1043), Expect = 1.510e-127
Identity = 372/800 (46.50%), Postives = 422/800 (52.75%), Query Frame = 0 
Query:   11 HEGLAIVTGTGWLTIFQIRLLETTCLYVCRESRRQVGRKVRVEAKTPRSLWH-------------GGCSSSSADG-----GARPDKRS-----------AVSGPAASGGGRNAHKFSWHGNNSERNTSTPNTPTDAATPVAPAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVPSIRCVRIDWLLPVAELLSPGFLWPRGVKELRFGPLFEDSIEHLNFPETLETLTFGFRFNRSLGPGRVRWPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLQGGDGGGFPPGLREINLGGVFNQPLAGVEWPXXXXXXXXXXXXXXXLGFTDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDKFNRAFVPPGVESSYAGXXXXXXXXXXXXXXXXXXXXXXXXXPALEPTPPPNPLRSFALPAGLRALVLGDDYDQAMSEGELPDSLANLVIGKSYSFVASVRWPTGLKRLELSCRWGSGXXXXXXXXXXXXXXNRAPPWLTLPSRLEYLDVGDGFNSPLGRIAFPASLKVLVFGAAFDHPVDHTGVDLLAEINEAQSRGLQLRRLPSANLERALDRR------------------------------PPPILPDGLEELRVGKAFNCDIETARLPKRLKRLVFALDSQFDRPVAGVAWPAXXXXXXXXXXXXXXVETGGWVDFDGNGXXXXXXXXXXXDRVDHDSALMLPAGLRELSFGWSFSHSLQGLVXXXXXXXXCFAQRYPMSHVRGLEWPPSLQCVVVGSFTLRSREEVFKRGSQPPF 751
            +EGLAIVTG GWLT FQ+R LE +CLYVCRESRRQV R+VRV   TPR+LW              GG S +  DG     GA P KR+            V            HKFSWHG +                                XXXXX               RVP +R V I W LP  ELL  GF WPRGVKEL FG  F++ +  + FPETLE LTFG+ FN SLGPGRVR   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PL+GG G G PP LRE++LGGVFNQPL GVEWP               LG+ DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                            Y+  ++ GELPD L  LVIG+S+SFV+SVRWP  L+RLELSCRWG                 R    L+LP RLEYLD GDGFNS L  ++ PASL+VL+ G+AF++P+DH                                                                PPP+LP GLEELR+G AFN ++E ARLP+RLKRLVF  +S+FDRPVAGV W  XXXXXXXXXXXXX +E+G   DFDG G                DSALMLPA LREL FGW+FSHSLQGL          F  RYP+SHVRGLEWPPSL+ + VGSF   SR++V K  +QPPF
Sbjct:    9 NEGLAIVTGAGWLTFFQLRSLECSCLYVCRESRRQVARRVRVTDGTPRTLWRVDRRRFSAETAGSGGHSGAQGDGARGGSGAGPSKRAXXXXXXXXXXXCVGSRTXXXXXXXQHKFSWHGRSXXXXXXXXXXXXXXXXXXXXXSIRGPATGTAAXXXXXASTLPATPTPARATTRVPLVRAVGIIWQLPALELLEAGFGWPRGVKELHFGAKFDEKVNAVEFPETLEALTFGYWFNESLGPGRVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPLRGGGGIGLPPRLREVHLGGVFNQPLDGVEWPASLEKLTLSEYFNQSLGYGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------------------------XXXXXXXXXXXXXXXYNHPLAGGELPDGLEKLVIGQSFSFVSSVRWPAELRRLELSCRWGDALFAGSLGGGGSRRQRRPSCCLSLPKRLEYLDAGDGFNSALDTVSLPASLRVLILGSAFNYPLDHANSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPVPPPLLPGGLEELRLGAAFNRELEAARLPERLKRLVFVAESKFDRPVAGVRWXXXXXXXXXXXXXXXPMESG-IGDFDGLGSGGGG-----------DSALMLPATLRELHFGWAFSHSLQGLALPRGLRRLSFFARYPVSHVRGLEWPPSLRSIHVGSFRFGSRKDVAKWAAQPPF 735
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LD72_ECTSI1.510e-12746.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 181..450
coord: 299..539
coord: 578..730

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:114062..116678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16802.1mRNA_C-linearis_contig91.16802.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 113925..117410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16802.1 ID=prot_C-linearis_contig91.16802.1|Name=mRNA_C-linearis_contig91.16802.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=752bp
MSSYGTTTTIHEGLAIVTGTGWLTIFQIRLLETTCLYVCRESRRQVGRKV
RVEAKTPRSLWHGGCSSSSADGGARPDKRSAVSGPAASGGGRNAHKFSWH
GNNSERNTSTPNTPTDAATPVAPAPTTAPTTTTTTAAATTASPLPPPAAP
TGTPSRVPSIRCVRIDWLLPVAELLSPGFLWPRGVKELRFGPLFEDSIEH
LNFPETLETLTFGFRFNRSLGPGRVRWPVGLKRLKFGATWNRLLTGARDT
WPASLKVLEFGTGFNKPLQGGDGGGFPPGLREINLGGVFNQPLAGVEWPS
GLQELTLSEYFDQPLGFTDGGGGVSFPRGLRRIVFGGRFNQRVSSTAWPQ
DLEVLAFGDKFNRAFVPPGVESSYAGGGGGGGSGSSSGGGSGGSGGGGGR
RPALEPTPPPNPLRSFALPAGLRALVLGDDYDQAMSEGELPDSLANLVIG
KSYSFVASVRWPTGLKRLELSCRWGSGGGGGAGGGGAGGGGNRAPPWLTL
PSRLEYLDVGDGFNSPLGRIAFPASLKVLVFGAAFDHPVDHTGVDLLAEI
NEAQSRGLQLRRLPSANLERALDRRPPPILPDGLEELRVGKAFNCDIETA
RLPKRLKRLVFALDSQFDRPVAGVAWPAGLEELRFGNCFDQRVETGGWVD
FDGNGGGGFVGGGGGGDRVDHDSALMLPAGLRELSFGWSFSHSLQGLVLP
RGLRRLCFAQRYPMSHVRGLEWPPSLQCVVVGSFTLRSREEVFKRGSQPP
F*
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