prot_C-linearis_contig91.16796.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig91.16796.1
Unique Nameprot_C-linearis_contig91.16796.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length668
Homology
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A6H5K330_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K330_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 1.860e-107
Identity = 386/751 (51.40%), Postives = 415/751 (55.26%), Query Frame = 0
Query:    1 MVEIMERRREEVVEWSPDMELEGCDAEKAAALLLAVAPRHRSFDATQQQEASGTVGGPGTGSTPSNTNGAAENSSGGINAPASGSPADNGGGLFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGESNMKREFGGIMNGALLSSSPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-AGMRLQSLADLATQACDSCRELQTMSEDNGAASNNNSHHPNHXSXXXXSYSSNSNHARGSPSSPSSGTPPRSSFANSFSPKPHMSPRHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ERGGPRTRFD-------DEXXXXXARAARAPRGRRNRPRSVSLPEGMELQARALSGSYSSGRRNGGRIDSIKEELEGHDGAP-GTRSRTWRGDSSGGAASSPRGE--------------WGGSVEDAEALIGLARRRVGWGVEAEESXXXXXXXXXX---------------------------------------------------GDGAICVSLPHMLSK--YADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKAMKSARAAAAGGGVVADVEADASMDMELLAGEN-SSETGSXXXXXXXG--ATAEGFDDGSEEA---MVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVSPKEPLKRVRRHSIAY 667
            MVEIM+R RE  VEWSPDMELEG DAEKAAALLLAVAPR+RSFDATQ+ E  G  G                          +G             XXXXX         XXXXXXXXXXXX GES +KREFGG +NGAL ++S R                                          A MRLQSLADLATQ      ELQTM + +   +     H  H        + NS        S S+ TPP       FSPK H+SPR S    XXXXXXXXXXXXXXXX        XXXXX            XXXXX  ERG PR+R +         XXX  A  A   RG R+RPRSVS+PEGMELQARA SG YSSGRR  GRIDSIKEELEGH+G+  GTRSRTWR  S  G +S   GE              WGG+VEDAE LIGLAR+RVGWGVEAEE     XXXXXX                                                   G+ A+  S     S+  YADMYNKNGRIGIYTRQEREAII+RFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQR ALKLKQK +KSARAAAA  G         SMDMELL GE  SSETGSXXXXXXX    TAEGFD+GSEEA   MVEXXXXXXXXXXXXXX                      VSPKEPLKRVRRHSIAY
Sbjct:    1 MVEIMDRGRE--VEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQKPEGPGPAG-------------------------TTGXXXXXXXXXXXXXXXXXXGGAVPPEGAXXXXXXXXXXXXSGESALKREFGGTVNGALPNASYRDSAAAALPGGDPREAAVSIASSPSSFSLSTSPRPRSASSGGVASMRLQSLADLATQ------ELQTMGDVDETDTPGIHGHRRHQQHQRSLSNGNSQ-------SSSARTPP---LPAGFSPKRHLSPRLSGGGGXXXXXXXXXXXXXXXXVSALSSAAXXXXXCSAPLPPARAAPXXXXXLRERGVPRSRHERXXXXXXXXXXXHAAARAEGGRGMRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELEGHEGSTHGTRSRTWRAGS--GGSSGFDGEXXXXXXXXXXXKSGWGGTVEDAETLIGLARQRVGWGVEAEEGSGADXXXXXXXXXXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETALSASPCRTCSRSEYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRTALKLKQKVLKSARAAAAASGAT-------SMDMELLGGEEMSSETGSXXXXXXXXXXVTAEGFDEGSEEAEDAMVEXXXXXXXXXXXXXXAHARRG----------------VSPKEPLKRVRRHSIAY 683          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: D8LD77_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD77_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 7.360e-64
Identity = 300/603 (49.75%), Postives = 326/603 (54.06%), Query Frame = 0
Query:    1 MVEIMERRREEVVEWSPDMELEGCDAEKAAALLLAVAPRHRSFDATQQQEASGTVGGPGTGSTPSNTNG-------------------------AAENSSGGINAPASGSPADNGGGLFGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXGESNMKREFGGIMNGALLSSSPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-----AGMRLQSLADLATQACDSCRELQTMSE--DNGAASNNNSHHPNHXSXXXXSYSSNSNHARGSPSSPSSGTPPRSSFANSFSPKPHMSPRHSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGGPRTRFD-------DEXXXXXARAARAPRGRRNRPRSVSLPEGMELQARALSGSYSSGRRNGGRIDSIKEELEGHDGAPGTRSRTWRGDSSGGAASSPRGEWGGSVEDAEALIGLARRRVGWGVEAEESXXXXXXXXXXGDGAICVSLPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKAMKSARAAAAGGG 564
            MVEIM+ RRE  VEWSPDMELEG DAEKAAALLLAVAPR+RSFDATQ  E      GPG    P+ T G                          A   + G   P+ G+                           XXXXXXXXXXX GES +KREFGG++NGAL ++S R                        XXXXXXXXXXXXXXXX      A MRLQSLADLATQ      ELQTM +  +   A  +       X XXXX         R         TPP  +    FSPK H+SPR S  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             ERG PR+R +         XXXXX       RGRR+RPRSVS+PEGMELQARA SG YSSGRR  GRIDSIKEELE                                       + L  R +                                ++YADMYNKNGRIGIYTRQEREAII+RFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKA+KSARAAA   G
Sbjct:    1 MVEIMDSRRE--VEWSPDMELEGDDAEKAAALLLAVAPRNRSFDATQNPE------GPG----PAGTTGXXXXXXXXXXXXXXXXXXXXXXXXXVAHVGTEGGTVPSEGA--------------------------GXXXXXXXXXXXSGESALKREFGGMLNGALPNTSYRDSAAAALSGGDPRAATVSTASSPSXXXXXXXXXXXXXXXXXXIGGGASMRLQSLADLATQ------ELQTMCDVDETDTAGAHGXXXXXXXXXXXXXXXXXXXXXR---------TPPAPA---GFSPKRHLSPRLSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLR-----------ERGVPRSRHERAEXXXXXXXXXXXXXXXXXXRGRRHRPRSVSMPEGMELQARAWSGGYSSGRRKSGRIDSIKEELE---------------------------------------VCLLDRNI------------------------------PTTRYADMYNKNGRIGIYTRQEREAIIARFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKALKSARAAAVASG 467          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A835ZBX8_9STRA (CCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX8_9STRA)

HSP 1 Score: 138 bits (348), Expect = 7.650e-31
Identity = 100/221 (45.25%), Postives = 118/221 (53.39%), Query Frame = 0
Query:  347 AARAPRGRRNRPRSVSLPEGMELQA--------RALSGSYSSGRRNGGRIDSIKEELEGHDGAPGTRSRTWRGDSSGGAASSPRGEWGGSVEDAEALIGLARRRVGWGVEAEESXXXXXXXXXXGDGAICVSLPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKAMKSARAA 559
            A+  PR RR RPRS S PEGME  A            G Y    R    I++IKEE                GD     ++S                      +  G +A             G  A  V+LPH+LSKY D+YN+NGRIGIYT QEREAII+RFK KR RRVW+KKIRYNCRKNLADKRLR+KGRFVKM+P QRAAL+L++ A   A  A
Sbjct:  180 ASPLPRTRRARPRSQSNPEGMERSAGWRGRGTGELGGGLYLGAGRRSPDIEAIKEE----------------GDEDCDRSASAXXXXXXXXXXXXXXXXXXXXXIADGDDAA------------GSAATAVTLPHLLSKYTDVYNRNGRIGIYTAQEREAIIARFKAKRLRRVWRKKIRYNCRKNLADKRLRIKGRFVKMTPAQRAALQLQRAAEDGANGA 372          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A835Z588_9STRA (CCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z588_9STRA)

HSP 1 Score: 128 bits (321), Expect = 5.080e-28
Identity = 63/80 (78.75%), Postives = 75/80 (93.75%), Query Frame = 0
Query:  469 VSLPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKL 548
            ++LPH+L KYAD+YN++GRIGIYT QEREAII+R++ KR RRVW+KKIRYNCRKNLADKRLRVKGRFVKM+P QRAAL+L
Sbjct:  272 LTLPHLLHKYADVYNRSGRIGIYTLQEREAIIARYRAKRARRVWRKKIRYNCRKNLADKRLRVKGRFVKMTPAQRAALQL 351          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: K8YW04_NANGC (CCT domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YW04_NANGC)

HSP 1 Score: 118 bits (296), Expect = 1.930e-24
Identity = 56/72 (77.78%), Postives = 68/72 (94.44%), Query Frame = 0
Query:  471 LPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQ 542
            LPHML+KY+D+YNK+GRIGIYTR ER+AII+RF+ KR RRVWKKKIRY+CRKNLADKR+RVKGRFVK+ P++
Sbjct:  441 LPHMLAKYSDVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRVRVKGRFVKLPPKE 512          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A7S1Z2T2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2T2_TRICV)

HSP 1 Score: 113 bits (283), Expect = 3.820e-24
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0
Query:  471 LPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALK 547
            LPH LSKY ++YNKNGRIGIYT  ER AII++F  KR RRVW KKIRYNCRKNLAD+R+RVKGRFVK S EQ A LK
Sbjct:  215 LPHSLSKYKEVYNKNGRIGIYTPAERAAIIAKFNSKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAQLK 291          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A4D9CLM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CLM4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.050e-24
Identity = 56/72 (77.78%), Postives = 68/72 (94.44%), Query Frame = 0
Query:  471 LPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQ 542
            LPHML+KY+D+YNK+GRIGIYTR ER+AII+RF+ KR RRVWKKKIRY+CRKNLADKR+RVKGRFVK+ P++
Sbjct:  799 LPHMLAKYSDVYNKHGRIGIYTRDERDAIIARFREKRQRRVWKKKIRYSCRKNLADKRVRVKGRFVKLPPKE 870          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A6S9FZK2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9FZK2_9STRA)

HSP 1 Score: 115 bits (288), Expect = 8.650e-24
Identity = 59/81 (72.84%), Postives = 67/81 (82.72%), Query Frame = 0
Query:  471 LPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQK 551
            LPH LSKY ++YNKNGRIG+YT  ER AII++F  KR RRVW KKIRYNCRKNLAD+R+RVKGRFVK S EQ AAL  +QK
Sbjct:  281 LPHSLSKYKEIYNKNGRIGVYTPAERAAIIAKFNGKRSRRVWNKKIRYNCRKNLADRRMRVKGRFVKRSTEQAAALAAQQK 361          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A7S2YJJ2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJJ2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.880e-23
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 0
Query:  463 GDGAICVSLPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQKAMK 554
            GD  + ++LPH L KY ++YN+NGRIGIYT  ER AII+RF +KR RRVW KKIRY CRKNLAD+RLRVKGRFVK S ++  A +L+ +  K
Sbjct:   32 GDKGV-LTLPHSLGKYKEVYNRNGRIGIYTPSERAAIIARFNKKRQRRVWNKKIRYGCRKNLADRRLRVKGRFVKRSEQELLAKELQARVEK 122          
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Match: A0A7S1VKC2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKC2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.460e-22
Identity = 55/72 (76.39%), Postives = 62/72 (86.11%), Query Frame = 0
Query:  469 VSLPHMLSKYADMYNKNGRIGIYTRQEREAIISRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSP 540
            ++LPH LSKY ++YNKNGRIGIYT  ER AIISRF+ KR RRVW KKIRY+CRKNLAD+RLRVKGRFVK  P
Sbjct:  237 LTLPHCLSKYKNVYNKNGRIGIYTPAERAAIISRFQDKRSRRVWNKKIRYSCRKNLADRRLRVKGRFVKRPP 308          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig91.16796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K330_9PHAE1.860e-10751.40CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LD77_ECTSI7.360e-6449.75CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZBX8_9STRA7.650e-3145.25CCT domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z588_9STRA5.080e-2878.75CCT domain-containing protein n=1 Tax=Tribonema mi... [more]
K8YW04_NANGC1.930e-2477.78CCT domain-containing protein (Fragment) n=2 Tax=N... [more]
A0A7S1Z2T2_TRICV3.820e-2475.32Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A4D9CLM4_9STRA7.050e-2477.78Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6S9FZK2_9STRA8.650e-2472.84Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2YJJ2_9STRA1.880e-2361.96Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1VKC2_9STRA1.460e-2276.39Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 608..637
NoneNo IPR availablePANTHERPTHR31319:SF10CCT MOTIF FAMILY PROTEINcoord: 135..560
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 135..560
IPR010402CCT domainPFAMPF06203CCTcoord: 496..538
e-value: 3.0E-16
score: 59.2
IPR010402CCT domainPROSITEPS51017CCTcoord: 496..538
score: 13.602

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig91contigC-linearis_contig91:51880..57097 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig91.16796.1mRNA_C-linearis_contig91.16796.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig91 50266..57097 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig91.16796.1 ID=prot_C-linearis_contig91.16796.1|Name=mRNA_C-linearis_contig91.16796.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=668bp
MVEIMERRREEVVEWSPDMELEGCDAEKAAALLLAVAPRHRSFDATQQQE
ASGTVGGPGTGSTPSNTNGAAENSSGGINAPASGSPADNGGGLFGSSANG
GGGGGALEAEGGGGVGTEPRGGGSGESNMKREFGGIMNGALLSSSPRGSS
SAAAGHGGGDARGAVSTSPSSSSQRPRSSSGGGGGGGHAGMRLQSLADLA
TQACDSCRELQTMSEDNGAASNNNSHHPNHHSNHHRSYSSNSNHARGSPS
SPSSGTPPRSSFANSFSPKPHMSPRHSSGGGGAAGSGVSCLSSAAAAVAA
AAVAAAAAAEPLATSRTPPNHHHHHLRERGGPRTRFDDEEEDEEARAARA
PRGRRNRPRSVSLPEGMELQARALSGSYSSGRRNGGRIDSIKEELEGHDG
APGTRSRTWRGDSSGGAASSPRGEWGGSVEDAEALIGLARRRVGWGVEAE
ESEEEGMGAGAGGDGAICVSLPHMLSKYADMYNKNGRIGIYTRQEREAII
SRFKRKRGRRVWKKKIRYNCRKNLADKRLRVKGRFVKMSPEQRAALKLKQ
KAMKSARAAAAGGGVVADVEADASMDMELLAGENSSETGSGETGSGSGAT
AEGFDDGSEEAMVEEEGEEEEEEEEEEEEEEEEEEGSSSSSNNNNNNNAE
VSPKEPLKRVRRHSIAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain