prot_C-linearis_contig90.16791.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16791.1
Unique Nameprot_C-linearis_contig90.16791.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length200
Homology
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A6H5JIE6_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIE6_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 4.320e-55
Identity = 104/116 (89.66%), Postives = 110/116 (94.83%), Query Frame = 0
Query:    1 MGLGQRKSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKE 116
            MGLGQRKSKG KGGHKTKN XXXXXXXXXXRRKDVDQIQDELM EEEKGEE +F+VDDDLPGQGQFYCTPCARHFTD+ TK+ HI+SKLHKRRMKDVAQEQYTQAEAERGAGM+KE
Sbjct:    1 MGLGQRKSKGGKGGHKTKNKXXXXXXXXXXRRKDVDQIQDELMVEEEKGEEMVFEVDDDLPGQGQFYCTPCARHFTDQQTKSTHIRSKLHKRRMKDVAQEQYTQAEAERGAGMTKE 116          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A836CC06_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC06_9STRA)

HSP 1 Score: 137 bits (344), Expect = 8.150e-38
Identity = 73/123 (59.35%), Postives = 85/123 (69.11%), Query Frame = 0
Query:    1 MGLGQRKSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPPAHP 123
            MG+GQ+KSKG   G KTKN           R  D+DQ+QD L +  E G+   F  DDDLPG GQFYC PCARHFTD+ T + H KSKLHKRR+KDVAQ++YTQ EA+ GAG SKE Y PAHP
Sbjct:    1 MGIGQKKSKGTSKGSKTKNKQYKRALDTKRRPMDIDQVQDILEKVAETGKPLKFAYDDDLPGGGQFYCAPCARHFTDQGTLDTHTKSKLHKRRLKDVAQKKYTQKEADAGAGKSKEVYAPAHP 123          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A3R7IPL6_9STRA (C2H2-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IPL6_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.100e-33
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0
Query:    7 KSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPPAHP 123
            K K  K GH TKN           R +D+DQIQD+L  E   G++  F+ D+DLPG GQFYCTPC RHF D TT++VH+K+K+HKRR+KDVAQ+QYTQ EA  GAG S EKY PAHP
Sbjct:   16 KKKQYKRGHATKN-----------RSRDIDQIQDDLCVETISGKKMAFEEDEDLPGLGQFYCTPCGRHFIDATTRDVHVKTKVHKRRLKDVAQKQYTQNEAMMGAGKSVEKYTPAHP 121          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A024UJ99_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ99_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.340e-33
Identity = 68/117 (58.12%), Postives = 81/117 (69.23%), Query Frame = 0
Query:    7 KSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPPAHP 123
            K KG K  H TK+           R +D+DQIQD+L +EEE G +  F++D+DLPG GQ+YCTPC RHF     ++VHI SK+HKRRMKDVAQEQYTQ EAER AG S E Y PAHP
Sbjct:   14 KKKGYKRAHATKS-----------RSRDIDQIQDDLKKEEETGVKMTFELDEDLPGLGQYYCTPCGRHFITANARDVHIASKVHKRRMKDVAQEQYTQKEAERAAGKSIETYTPAHP 119          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A8K1FHU3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHU3_PYTOL)

HSP 1 Score: 123 bits (309), Expect = 8.330e-33
Identity = 62/90 (68.89%), Postives = 72/90 (80.00%), Query Frame = 0
Query:   31 RRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPP 120
            R +D+DQIQD+L  E+  G+   F+VD+DLPG GQ+YCTPC RHF D  T++VHIK KLHKRRMKDVAQEQYTQAEAE GAG S EKY P
Sbjct:   27 RGRDIDQIQDDLKLEKLSGKAMSFEVDEDLPGLGQYYCTPCGRHFIDAKTRDVHIKGKLHKRRMKDVAQEQYTQAEAEAGAGRSVEKYVP 116          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A024G9F2_9STRA (C2H2-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G9F2_9STRA)

HSP 1 Score: 123 bits (309), Expect = 8.330e-33
Identity = 63/119 (52.94%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    7 KSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPPAHPVK 125
            K KG K  H TK            R +DVDQIQD+L  E ++ +   F++D+DLPG GQ+YCTPCARHF D TT+++H+++K+HKRR+KDV QEQYTQ EA+ GAG ++E+Y PAHP +
Sbjct:   14 KVKGYKKSHSTKR-----------RSRDVDQIQDDLKLESQQNKPLKFEIDEDLPGLGQYYCTPCARHFIDATTRDLHVRTKVHKRRLKDVRQEQYTQREADLGAGKTREEYVPAHPTE 121          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: T0QYK1_SAPDV (C2H2-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QYK1_SAPDV)

HSP 1 Score: 123 bits (309), Expect = 1.370e-32
Identity = 67/114 (58.77%), Postives = 79/114 (69.30%), Query Frame = 0
Query:    7 KSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPP 120
            K KG K GH TK+           R +D+DQIQD+L +EE  G    F++D+DLPG GQFYCTPC RHF DE  + VHIKSK+HKRR+KDVAQEQY+Q EAER AG S E Y P
Sbjct:   29 KKKGYKRGHATKS-----------RSRDIDQIQDDLKKEETTGTVMTFELDEDLPGLGQFYCTPCGRHFMDEVARTVHIKSKVHKRRLKDVAQEQYSQKEAERAAGKSVEAYVP 131          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A662Y0F3_9STRA (C2H2-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0F3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.540e-32
Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 0
Query:   12 KGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPPAHP 123
            K GH TKN           R +DVDQIQD+L  E+ KG+   F+ D+DLPG GQFYCTPC RHF D  T++VHIK+K+HKRR+KDVAQ+QYTQ EA  GAG + E Y PAHP
Sbjct:   20 KRGHATKN-----------RSRDVDQIQDDLRVEKLKGKPLAFEEDEDLPGLGQFYCTPCGRHFIDAITRDVHIKTKVHKRRLKDVAQKQYTQKEAMLGAGKTVETYTPAHP 120          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: A0A1V9ZTM5_9STRA (C2H2-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTM5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.420e-31
Identity = 66/114 (57.89%), Postives = 78/114 (68.42%), Query Frame = 0
Query:    7 KSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPP 120
            K KG K GH TK+           R +D+DQIQD+L +E   G+   F+VD+DLPG GQFYCTPC RHF D   + VHIKSK+HKRR+KDVAQEQY+Q EAER AG S E Y P
Sbjct:   14 KKKGYKRGHATKS-----------RSRDIDQIQDDLKKEAATGKPMAFEVDEDLPGLGQFYCTPCGRHFMDAVARAVHIKSKVHKRRLKDVAQEQYSQKEAERAAGKSVEAYVP 116          
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Match: W2FRC2_PHYPR (C2H2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2FRC2_PHYPR)

HSP 1 Score: 120 bits (300), Expect = 2.070e-31
Identity = 65/117 (55.56%), Postives = 80/117 (68.38%), Query Frame = 0
Query:    7 KSKGNKGGHKTKNXXXXXXXXXXXRRKDVDQIQDELMEEEEKGEETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQEQYTQAEAERGAGMSKEKYPPAHP 123
            K K  K GH TKN           R +D+DQIQD+L  E+  G+   F+ D+DLPG GQFYCTPC RHF D  T++VH+K+K+HKRR+KDVAQ+QYTQ EA +GAG   E Y PAHP
Sbjct:   16 KKKQYKRGHATKN-----------RARDIDQIQDDLRVEKLTGKSMAFEEDEDLPGLGQFYCTPCGRHFIDAKTRDVHLKTKVHKRRLKDVAQKQYTQNEAMQGAGKGVETYKPAHP 121          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIE6_9PHAE4.320e-5589.66C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CC06_9STRA8.150e-3859.35C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A3R7IPL6_9STRA1.100e-3358.12C2H2-type domain-containing protein n=3 Tax=Phytop... [more]
A0A024UJ99_9STRA1.340e-3358.12C2H2-type domain-containing protein n=1 Tax=Aphano... [more]
A0A8K1FHU3_PYTOL8.330e-3368.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024G9F2_9STRA8.330e-3352.94C2H2-type domain-containing protein n=1 Tax=Albugo... [more]
T0QYK1_SAPDV1.370e-3258.77C2H2-type domain-containing protein n=1 Tax=Saprol... [more]
A0A662Y0F3_9STRA3.540e-3258.93C2H2-type domain-containing protein n=1 Tax=Nothop... [more]
A0A1V9ZTM5_9STRA1.420e-3157.89C2H2-type domain-containing protein n=1 Tax=Achlya... [more]
W2FRC2_PHYPR2.070e-3155.56C2H2-type domain-containing protein n=9 Tax=Phytop... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48
NoneNo IPR availableGENE3D3.30.160.60coord: 52..115
e-value: 4.1E-27
score: 95.8
NoneNo IPR availablePANTHERPTHR46095FAMILY NOT NAMEDcoord: 12..121
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 65..91
e-value: 3.5E-8
score: 33.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 68..90
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 66..95
score: 8.891
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 54..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:631243..634044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16791.1mRNA_C-linearis_contig90.16791.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 630263..635135 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16791.1 ID=prot_C-linearis_contig90.16791.1|Name=mRNA_C-linearis_contig90.16791.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=200bp
MGLGQRKSKGNKGGHKTKNKEYKKGHATKNRRKDVDQIQDELMEEEEKGE
ETMFDVDDDLPGQGQFYCTPCARHFTDETTKNVHIKSKLHKRRMKDVAQE
QYTQAEAERGAGMSKEKYPPAHPVKGAPAASAAPAPGATVESRVVGWAVP
GGASGIGGAATTAAVKPQGELGGATEAGAGSGKGVNLSGVSMEEEDPDL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022755Znf_C2H2_jaz
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf