prot_C-linearis_contig90.16785.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16785.1
Unique Nameprot_C-linearis_contig90.16785.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length406
Homology
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: D7FMS9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS9_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.360e-104
Identity = 195/323 (60.37%), Postives = 226/323 (69.97%), Query Frame = 0 
Query:    8 LALAVGTGTQPTHAFVVAP--HRLVLPPCARSCSSVTGRQAVPLSDRDGSGSAWSHGRERRXXXXXXXXXXXXNGGLS--MRAGRPGRERRVMIEGAGGETRRVERRSRK-PDLKSMRRIGLQAAAAVVVQQEQGVDAQTEE---EQEAIDAQEAAA-LSLAERYEAAQGLKERQMMEEEQAGTVLDQYTQIYIPMDGVVIKKTYGFWTWQVFGLIFIQHFVRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDPHNTKRNEEAEAKAGADGK 321
            LALA+G  T   HAFVV    HR  L  CAR  SS      VP+ D    G A S+ R RR               LS  MR  RPG    V IEG GGETRRV++RSR+ PDL   R+IGLQ AAAVVVQQ++ VD   E+   E + I  +     ++LAE ++A+Q L E  MM+  Q GT+ DQYT++Y+PMDG+VIKKTYGFWTWQVFG IF+QHFVRN++RKGGSLKKTSMSEL WDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDF+CPEC APRS+F+DANDK+DPHN KR E+  A     GK
Sbjct:    6 LALALGANT---HAFVVTTQQHRPALSSCARGQSS----SPVPVGD----GPARSYSRLRRTGGYAVSPSGNTKNRLSTCMRVRRPGGGD-VEIEGVGGETRRVQQRSRRRPDL---RQIGLQTAAAVVVQQDEVVDVAEEQAGAEGDTIGEESGEEFMNLAESFDASQRLVEESMMDP-QTGTIQDQYTKLYMPMDGLVIKKTYGFWTWQVFGFIFVQHFVRNLVRKGGSLKKTSMSELKWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFKCPECDAPRSSFFDANDKNDPHNQKRLEKMAANVAGPGK 312
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A836CG96_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG96_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.130e-26
Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 0 
Query:  209 QVFGLIFIQHFVRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDPHNTKR-NEEAEAKAGA 318
            Q+F    I  F    +RKG S+++    EL W+++VTE EH+ EL AY CE+CGYTLFPAR RH+ FF++V+D+ CPECGA +S F D +D  DP N  R  EE EA   A
Sbjct:    7 QIFVPFVIVQFFITWVRKGFSIRRVMAPELKWEYLVTEKEHIKELHAYRCEQCGYTLFPARNRHKKFFEDVKDYTCPECGAAKSEFVDIHDLTDPRNIDRPREELEAALAA 117
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A0G4GWS9_VITBC (Rubredoxin-like domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWS9_VITBC)

HSP 1 Score: 80.9 bits (198), Expect = 9.330e-14
Identity = 45/95 (47.37%), Postives = 56/95 (58.95%), Query Frame = 0 
Query:  220 VRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDPHNTKRNEEAEA 314
            V N++ + G+ K+T         I+   E   EL  + CE CGYT+FPARGR   FF +  DFECP CGA +  FYD ND DDPHN K  EE E+
Sbjct:  114 VLNLVTRSGA-KRTKA-------IIKTEEDAKELHRFTCENCGYTIFPARGREGKFFGD--DFECPVCGAKKEHFYDGNDPDDPHN-KAPEEGES 197
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A7S2D095_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2D095_9EUKA)

HSP 1 Score: 79.0 bits (193), Expect = 1.180e-12
Identity = 40/103 (38.83%), Postives = 57/103 (55.34%), Query Frame = 0 
Query:  201 KTYGFWTWQVFGLIFIQHFVRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDP 303
            KT   WT  +F L+ ++  VR  +   G+L+     E N+ +I        EL  +CCE CGYT+FPARGR   FF +   F+CP C +P+ +F+D  D  DP
Sbjct:  121 KTSFLWTGIIFTLLIVK-IVR--MAAAGNLRAAFFEEPNYKYIARSDAEEAELHEFCCETCGYTMFPARGREGKFFPDA--FKCPNCDSPKESFFDMTDLSDP 218
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A8J6CCP8_DIALT (Rubredoxin-like domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCP8_DIALT)

HSP 1 Score: 72.0 bits (175), Expect = 5.790e-11
Identity = 33/65 (50.77%), Postives = 44/65 (67.69%), Query Frame = 0 
Query:  252 ELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDPHNTKRNEEAEAKA 316
            ELKA+ CE CGY L+PARGR   FF +   F+CP C +P+ +FYD ND +DP N + ++E  A A
Sbjct:  144 ELKAFKCENCGYELYPARGREGKFFPDT--FKCPMCKSPKESFYDMNDANDPRNWEEDDENGADA 206
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A7J7IMV8_9RHOD (Rubredoxin-like domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMV8_9RHOD)

HSP 1 Score: 73.2 bits (178), Expect = 6.250e-11
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 0 
Query:  204 GFWTWQVFGLIFIQHFVRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDPHNTKRNEE 311
             FW      ++F+     N++R+    KK     +  +    E +   EL  Y C +CGYTL+PARGR   FF +   F+CP+C AP+S F+D ND +DP N + +EE
Sbjct:  140 AFWFLMGIFIVFL-----NVLRRLVRRKKAENVPIGSEKYRAESDE--ELHVYRCGQCGYTLYPARGRELKFFPKT--FKCPQCSAPKSEFWDLNDPNDPRNQETDEE 238
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A7S1U8S4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8S4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 7.240e-8
Identity = 38/94 (40.43%), Postives = 50/94 (53.19%), Query Frame = 0 
Query:  214 IFIQHFVRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLE--LKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDPHN 305
            +F+   VR I  K    KK    E NWD    +    +E  L  + CE+CG+T++PARGR   FF +   F CP C A + +FYD ND  DP N
Sbjct:  117 LFVARTVRQI--KDKIWKK----EPNWDAAELQATGEVEDVLHMFRCEDCGFTIYPARGREGKFFPKG--FTCPNCSASQESFYDLNDPTDPRN 202
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: M2WXM4_GALSU (Rubredoxin-like domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXM4_GALSU)

HSP 1 Score: 57.8 bits (138), Expect = 5.190e-6
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:  243 IVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDAND 299
            I+ E +    L  + C  CGY+LFPA+GR   FF   + F+CP CG+ + AFYD +D
Sbjct:  143 ILEEEQENSALHVFKCANCGYSLFPAKGREFKFF--TDSFKCPACGSTKEAFYDTSD 197
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A0G4FDK8_9ALVE (Rubredoxin-like domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FDK8_9ALVE)

HSP 1 Score: 58.9 bits (141), Expect = 5.420e-6
Identity = 32/88 (36.36%), Postives = 44/88 (50.00%), Query Frame = 0 
Query:  220 VRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDDPHNTK 307
            V  +   GGS + T+        IV     +  L  Y C  C Y + PA GR + F+    +  CPECGAP+ AF+DAND  DP + +
Sbjct:  128 VGTVFGGGGSARTTA--------IVKTDSDMKLLHKYVCSNCEYHIMPAIGREKKFYKP--ELGCPECGAPKEAFFDANDLSDPRSVE 205
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BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Match: A0A7S0E573_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E573_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 6.050e-6
Identity = 37/99 (37.37%), Postives = 48/99 (48.48%), Query Frame = 0 
Query:  204 GFWTWQVFGLIFIQHFVRNIIRKGGSLKKTSMSELNWDHIVTEPEHLLELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDKDD 302
            GF+T  +F  + I   V  I R G S+      E     +  E E    L  + CE+CG+TLFPARGR   FF +   F CP C A +  F+D  D  D
Sbjct:  111 GFFT--IFMCVIINRIVL-IARFGPSMGLNKGDEFKAGSVEEEAE----LHEFVCEDCGFTLFPARGREGKFFSDS--FRCPTCNAAKEKFFDLTDVTD 200
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FMS9_ECTSI1.360e-10460.37Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A836CG96_9STRA2.130e-2650.45Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A0G4GWS9_VITBC9.330e-1447.37Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7S2D095_9EUKA1.180e-1238.83Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A8J6CCP8_DIALT5.790e-1150.77Rubredoxin-like domain-containing protein n=2 Tax=... [more]
A0A7J7IMV8_9RHOD6.250e-1137.04Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A7S1U8S4_9STRA7.240e-840.43Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
M2WXM4_GALSU5.190e-643.86Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A0G4FDK8_9ALVE5.420e-636.36Rubredoxin-like domain-containing protein n=1 Tax=... [more]
A0A7S0E573_9EUKA6.050e-637.37Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.28.10coord: 253..297
e-value: 6.2E-6
score: 27.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..405
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.559
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 252..298
IPR024934Rubredoxin-like domainPROSITEPS50903RUBREDOXIN_LIKEcoord: 253..297
score: 9.386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:576750..583106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16785.1mRNA_C-linearis_contig90.16785.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 576532..583632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16785.1 ID=prot_C-linearis_contig90.16785.1|Name=mRNA_C-linearis_contig90.16785.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=406bp
MLRLVIPLALAVGTGTQPTHAFVVAPHRLVLPPCARSCSSVTGRQAVPLS
DRDGSGSAWSHGRERRDRSSNANVNGNANGGLSMRAGRPGRERRVMIEGA
GGETRRVERRSRKPDLKSMRRIGLQAAAAVVVQQEQGVDAQTEEEQEAID
AQEAAALSLAERYEAAQGLKERQMMEEEQAGTVLDQYTQIYIPMDGVVIK
KTYGFWTWQVFGLIFIQHFVRNIIRKGGSLKKTSMSELNWDHIVTEPEHL
LELKAYCCEECGYTLFPARGRHEVFFDEVEDFECPECGAPRSAFYDANDK
DDPHNTKRNEEAEAKAGADGKGGGADDDNAGGVVASAAAGASSSVADAKS
PSAMTTTAPVSPSAPASSTPESKAAPPEAKTGETSPPPDNTRPDGDDDGD
DLLDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024934Rubredoxin-like_dom