prot_C-linearis_contig90.16754.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16754.1
Unique Nameprot_C-linearis_contig90.16754.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length313
Homology
BLAST of mRNA_C-linearis_contig90.16754.1 vs. uniprot
Match: D7G6I6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I6_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 8.200e-62
Identity = 117/241 (48.55%), Postives = 161/241 (66.80%), Query Frame = 0
Query:   74 MDQFLAPMPPGREESRHLFVTTHKWTVSALDRTRKTVAPKPQP---EGSRKRAKRGANGLSGSNPKGISAAARVKEFPNDSLDVSAGSLFCCACSSRLGTRRSTIMSHIGLTAAGTHIAKPNKHMKKMVLFNANKAETPQRMQRFSEFC-ERNNTYGKNLQPENSDQRCTIIRQLMSAGVLLSKLDDLVPMFNGLRANMCGSSKGKEYIGFIAEEEMRRTREEVAGKCVSVAIDCTPFSGT 310
            MD+F+ P  PG  E+ H+FV  +K   +A  R R++VA  P     + S  +  RG NGLS SNPK ISA++R + FP + L VSAG+L+C  C+ RLGT  STI +H GL   G+H A+PN+HM+K+ +  A + E P R  RF+++C +R   YGK + PE +D+RC +I Q+M AG+ LSKLD L  MF  L A+M GSSK KEYIGFI EE++R  R+++ GK + +AID TPF+GT
Sbjct:    1 MDKFVQPYVPGSNEAAHIFVLANKPAAAAAGRQRRSVAAAPATGASDNSTGKRSRGVNGLSSSNPKTISASSRCRTFPGEGLVVSAGALYCEPCAKRLGTCLSTIRAHCGLLKDGSHKAEPNQHMQKLEVHLAAEFEAPNRKTRFTQYCNKRRAVYGKTVDPEVNDKRCKLITQVMGAGISLSKLDPLRSMFTSLGADMVGSSKSKEYIGFINEEQIRSIRQDILGKDIGIAIDGTPFNGT 241          
BLAST of mRNA_C-linearis_contig90.16754.1 vs. uniprot
Match: A0A1X7TFE2_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFE2_AMPQE)

HSP 1 Score: 84.7 bits (208), Expect = 1.530e-14
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = 0
Query:  106 TRKTVAPKPQPEGSRKRAKRGANGLSGSNPKGISAAARVKEFPNDSLDVSAGSLFCCACSSRLGTRRSTIMSHIGLTAAGTHIAKPNKHMKKMVLFNANKAETPQRMQRFSEFCERNNTYGKNLQPENSDQRCTIIRQLMSAGVLLSKLDDLVPMFNGLRANMCGSSKGKEYIGFIAEEEMRRTREEVAGKCVSVAIDCTPFSG 309
            +RK    KP   G+ KR K G    +  +PK I+ AARVKEFP++ L V +G LFC AC   +  ++STI +HI            +KH K      +  A+     +  + + +  +  G ++  E+   R  ++ Q + AG+ +SKLD+L  +       +  SS   +YI  + ++E +  R+ + GK VSV  D T   G
Sbjct:   44 SRKRKIEKPSTTGN-KRHKAGVTNTT--DPKSITPAARVKEFPDECLAVRSGKLFCTACREEIALKKSTIKNHISCG---------DKHQKSKKRLQSKAAKERDLTELLTSYDKEVHPAGSSVSMEDRVYRAKVVEQFLYAGIPISKLDNLRNLLEENALRLTHSSHMMDYIPPLLKKEKQAVRQAIEGKNVSVCFDGTSRLG 235          
BLAST of mRNA_C-linearis_contig90.16754.1 vs. uniprot
Match: A0A2B4RQL6_STYPI (Protein sidekick-2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQL6_STYPI)

HSP 1 Score: 69.7 bits (169), Expect = 2.020e-9
Identity = 48/175 (27.43%), Postives = 83/175 (47.43%), Query Frame = 0
Query:  133 SNPKGISAAARVKEFPNDSLDVSA--GSLFCCACSSRLGTRRSTIMSHIGLTAAGTHIAKPNKHMKKMVLFNANKAETPQRMQRFSEFCERNNTYGKNLQPENSDQRCTIIRQLMSAGVLLSKLDDLVPMFNGLRANMCGSSKGKEYIGFIAEEEMRRTREEVAGKCVSVAIDCT 305
            SNPK ++A+ARV EFP ++  VS   G  FC AC  ++G +++ I +H+          K +KH          +A      +   E+  +    G++L          ++R  M AGV L K+D    +      ++  S    ++I  IA++E ++ +EE+ G+ VS+  D T
Sbjct: 1705 SNPKNVTASARVTEFPGENFTVSKSNGQAFCNACCEQIGLKKTLIENHV----------KSSKHASGKERLEKKEARERDIAKSLKEYDNQFLPKGESLSVALRVYTVKVVRSFMKAGVPLHKIDCFRELLEEEAFSLTSSRHLSDFIDVIAKDERKKVKEEIEGRDVSIIFDGT 1869          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6I6_ECTSI8.200e-6248.55Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A1X7TFE2_AMPQE1.530e-1430.39Dimer_Tnp_hAT domain-containing protein n=1 Tax=Am... [more]
A0A2B4RQL6_STYPI2.020e-927.43Protein sidekick-2 n=1 Tax=Stylophora pistillata T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:45983..47496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16754.1mRNA_C-linearis_contig90.16754.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 45811..48739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16754.1 ID=prot_C-linearis_contig90.16754.1|Name=mRNA_C-linearis_contig90.16754.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=313bp
MATTAATPAPPAPAAASAALSAHVSTHTTDGTPVLELVVVDPAVAPTAAA
APAPAPTPAPDPTTSPTPAPGGAMDQFLAPMPPGREESRHLFVTTHKWTV
SALDRTRKTVAPKPQPEGSRKRAKRGANGLSGSNPKGISAAARVKEFPND
SLDVSAGSLFCCACSSRLGTRRSTIMSHIGLTAAGTHIAKPNKHMKKMVL
FNANKAETPQRMQRFSEFCERNNTYGKNLQPENSDQRCTIIRQLMSAGVL
LSKLDDLVPMFNGLRANMCGSSKGKEYIGFIAEEEMRRTREEVAGKCVSV
AIDCTPFSGTVG*
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