prot_C-linearis_contig90.16753.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig90.16753.1
Unique Nameprot_C-linearis_contig90.16753.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length119
Homology
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BLAST of mRNA_C-linearis_contig90.16753.1 vs. uniprot
Match: D7FTE2_ECTSI (L-type lectin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE2_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.440e-9
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0 
Query:    1 SQPTNFEDTVVLIISAMKYKTWQAGRFVGIDESFTGIAVIVNTNRQLLHK 50
            ++   + DT+ L+I+ MKYK  Q GRF GIDE FTG+ V+ NTNRQLL++
Sbjct:  113 TEKVKYGDTIALVIAPMKYKAGQDGRFFGIDEKFTGLVVVANTNRQLLNR 162
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig90.16753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTE2_ECTSI2.440e-954.00L-type lectin-like domain-containing protein n=2 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig90contigC-linearis_contig90:27442..39307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig90.16753.1mRNA_C-linearis_contig90.16753.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig90 27442..39307 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig90.16753.1 ID=prot_C-linearis_contig90.16753.1|Name=mRNA_C-linearis_contig90.16753.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=119bp
SQPTNFEDTVVLIISAMKYKTWQAGRFVGIDESFTGIAVIVNTNRQLLHK
GNKLHRTAPRRGRRGQQRHQDVQRSHRRAGGVHRQHEVRREGRRLQRQAG
ADREPRDRPPQGTRQCQD*
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