prot_C-linearis_contig9.16744.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16744.1
Unique Nameprot_C-linearis_contig9.16744.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length215
Homology
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BLAST of mRNA_C-linearis_contig9.16744.1 vs. uniprot
Match: D7FMW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMW4_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.820e-32
Identity = 62/93 (66.67%), Postives = 75/93 (80.65%), Query Frame = 0 
Query:   60 LVILDESTELPPFGMCMSGLQERLKRRLGLEIAESAIKACLSPYYDLAEWEDRYITKSLGVEVEEFGSADHPPRSPLEVFCLSSDGEE--DDG 150
            + +LDE+TELPPFG  ++ L++RLK RLGLEIA+SAI ACLSPYY+L EWEDRY+  SLG EV+EFGSA HPPR PLE F L +D E+  DDG
Sbjct:    1 MAVLDEATELPPFGFNIAVLEQRLKHRLGLEIAQSAINACLSPYYNLREWEDRYVVTSLGSEVQEFGSAGHPPRFPLEEFLLCTDDEQEADDG 93
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMW4_ECTSI1.820e-3266.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3758221..3759970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16744.1mRNA_C-linearis_contig9.16744.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3758221..3759972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16744.1 ID=prot_C-linearis_contig9.16744.1|Name=mRNA_C-linearis_contig9.16744.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=215bp
QPPSSPSARSRQRNSMEDRESAPRIARKSSAISLSAGHNGVNSGTTRITD
AQCLSLAQQLVILDESTELPPFGMCMSGLQERLKRRLGLEIAESAIKACL
SPYYDLAEWEDRYITKSLGVEVEEFGSADHPPRSPLEVFCLSSDGEEDDG
SGDDDYDGEHTAVPAGSGTTFSDHAVDLGRADGGNVDDAGGGSAGDKMQE
GEEEEDAATGAGAAG
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