prot_C-linearis_contig9.16725.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A6H5L1E0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1E0_9PHAE) HSP 1 Score: 523 bits (1347), Expect = 5.040e-176 Identity = 378/490 (77.14%), Postives = 402/490 (82.04%), Query Frame = 0
Query: 119 VSLPLLATPQ-PPSAAPGQTLAAYAYPGG-----AXXXXXAGQA--MTPQQVAQEAIAKTMAAMQEKQLDQLQPGQVLDNRRGYIYGNLIGQMEKARLERAALKNENYVRRKDEIARRKRLGLPFDGLIDKSAIPSGNAGXXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGKVVLGEPEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDMGPLLQGAPDSPPPTDLNSFLESV 600
+SLPLLATPQ PP AAPGQTL AYAYPG A AGQ +TPQQVAQEAIAKTMAAM+E+Q QLQPGQVLDNRRGYI+GNLIG+MEKARLERAA KNENYVRRKDEIARRKRLGLP DGLID + + XXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTA AK+QNTSVYITGLP+DITQAKIELVFSQ+GSVKR+KVYRN+ G+ KGDGLVT+AKP SVDLAV+K+NGHEISVG+PI+VSMADFNR K G E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D GALPPLPEECGADKHPVVVLR VYTREES+ADP+FFDDLEADMLMECVKFGTVISVATPE PGYFG VV+TF S GAN CAEAMHGRWFDQRQIEALVTGK VL + EE XXXXXXXXXXXXXX E MGPLLQG PDSPPP DLNSFLESV
Sbjct: 194 LSLPLLATPQQPPPAAPGQTLGAYAYPGVGVAPVAAPAPAAGQQQQLTPQQVAQEAIAKTMAAMKERQEQQLQPGQVLDNRRGYIHGNLIGKMEKARLERAAAKNENYVRRKDEIARRKRLGLPLDGLIDAKKLLA----XXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAGAKAQNTSVYITGLPSDITQAKIELVFSQHGSVKRSKVYRNEAGEAKGDGLVTFAKPASVDLAVSKMNGHEISVGYPITVSMADFNRTKSGTATEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------YDD--GALPPLPEECGADKHPVVVLRSVYTREESEADPHFFDDLEADMLMECVKFGTVISVATPEAPGYFGCVVITFRTSNGANACAEAMHGRWFDQRQIEALVTGKEVLSKEGEENGXXXXXXXXXXXXXXGDVREATGEKEEND--ETAMGPLLQGPPDSPPPADLNSFLESV 665
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: D7FR18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR18_ECTSI) HSP 1 Score: 273 bits (699), Expect = 1.640e-84 Identity = 213/431 (49.42%), Postives = 224/431 (51.97%), Query Frame = 0
Query: 171 MAAMQEKQLDQLQPGQVLDNRRGYIYGNLIGQMEKARLERAALKNENYVRRKDEIARRKRLGLPFDGLIDKSAIPSGNAGXXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGKVVLG-EPEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDMGPLLQGAPDSPPPTDLNSFLESV 600
MAAMQE+Q QLQPGQVLDNRRGYI+GNLIG+MEKARLERAA KNENYVRRKDEIARRKRLGLP DGLID + LNG + + ALPPLPEECGADKHPVVVLR VYTREES+ADP+FFDDLEADMLMECVKFGTVISVATPE PGYFG VV+TF+ S GAN CAEAMHGRWFDQRQIEALVTGK VLG E E XXXXXXXXXXXXXXXXXXXXXXXXXXXXX +GPLLQG PDSPPPTDLNSFLESV
Sbjct: 1 MAAMQERQEQQLQPGQVLDNRRGYIHGNLIGKMEKARLERAAAKNENYVRRKDEIARRKRLGLPLDGLIDAKKL----------------------------------------------------------------------------------------------------------LNGXXXXXDY--------------------------------------------------------------------HDSALPPLPEECGADKHPVVVLRSVYTREESEADPHFFDDLEADMLMECVKFGTVISVATPEEPGYFGCVVITFKTSDGANACAEAMHGRWFDQRQIEALVTGKEVLGKEGGENGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLGPLLQGPPDSPPPTDLNSFLESV 257
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A7S2R3X3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3X3_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.070e-50 Identity = 127/333 (38.14%), Postives = 173/333 (51.95%), Query Frame = 0
Query: 207 RLERAALKNENYVRRKDEIARRKRLGL---PFDGLI---DKSAIPSGNAGXXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFN---RNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQR--QIEAL 528
RL+RA KN +Y+RRKD R + LG+ P D D++ G G QSR GIG +++NTSVY+ GLP IT A+++L+FS +G VKR KVYR+D G+ KGD LVTY K SV A+ K+NGH I+ G + VS ADF+ ++ G ++E GP +D E ED PLP+EC ++ P VLR VYT E++ + +F DDLEA++L EC++FG+V+ V TP P Y G+V VTFE+ A C E M GR+FD R Q++AL
Sbjct: 91 RLQRAMEKNIDYIRRKDMEERARILGMGGDPDDAWSFGPDQTGKKRGRGGNRKVE--------------------QSRLGIGAGRVEAENTSVYVAGLPQSITWAQMDLLFSPFGRVKRIKVYRDDAGKPKGDALVTYVKQGSVASAIQKMNGHTIAPGMKLHVSPADFSHKDQSVDGGEDEDGVAEDEAESSGGGVGRANDAEDVDGQGMEAVEALVGPLKD--EDFDEDGVPRFTPLPDECRPEQCPTCVLRNVYTAEQAASTSSFLDDLEAEILRECIQFGSVVCVVTPSQPYYVGAVCVTFEDIQAAQHCGEVMDGRFFDYRTMQVQAL 401
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A835YW78_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW78_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.290e-48 Identity = 111/264 (42.05%), Postives = 145/264 (54.92%), Query Frame = 0
Query: 276 QSRA-GIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQ-----VKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPN-FFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGK 532
QSR+ G+G AAA+ VY+TGLP TQA++E +FS +G ++R KVY DG + KGD LVTY KP SVD AV +LNGH+++ G I V+ ADF+ +GG XXX P LPE+C A+++PVV+L VYT EE +P+ F+ +LEADML EC +FGTV V T E Y GSV +TF +S GA +CA+ MHGR+FD RQIE + GK
Sbjct: 7 QSRSMGLGAAAARQAQCGVYVTGLPPTTTQAQLEQLFSAHGPIRRVKVYMEDGDKDASTRCKGDALVTYVKPSSVDTAVPRLNGHQVAPGFTIKVTQADFSHKEGGRDSXXXXXXG------------------------------------------------PALPEQCCAEQYPVVILHNVYTAEEVTENPDGFYSELEADMLGECARFGTVRCVVTLEGE-YEGSVAITFADSAGARECAKTMHGRFFDGRQIEVDIVGK 221
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A4D9CYD4_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYD4_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.940e-39 Identity = 99/255 (38.82%), Postives = 138/255 (54.12%), Query Frame = 0
Query: 279 AGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGKV 533
AG+G AA ++ SVY+ GL A+ T +++++F+ YG ++R KVYR+ G+ KGD LVTYA+P S A+ KLNG+ ++ H + +S ADF+ + G P ++ E EDY LP EC ADK+PVV+LR VY E+ AD +F + LE DML ECV+ G V + TPE Y G+V V F + A CA+AMHGR+FD RQI+ + GKV
Sbjct: 174 AGVGAEAAAVESASVYVEGLMAETTWDQLDILFAPYGRLRRIKVYRDAHGKPKGDALVTYARPGSTAAAIKKLNGYALAPNHCLRLSQADFSYKEEGANVHEGIGFDDHMAH--------------------------PAQE--EDEQEDYE----TLPPECEADKYPVVILRNVYDPTET-ADEDFAE-LETDMLQECVRHGEVKRIVTPEGDYYAGAVAVVFVSFEAAQACAKAMHGRFFDGRQIDVELQGKV 394
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A7S0KC46_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KC46_9CHLO) HSP 1 Score: 112 bits (280), Expect = 5.710e-23 Identity = 89/265 (33.58%), Postives = 124/265 (46.79%), Query Frame = 0
Query: 288 SQNTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHP---ISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEA-LVTGKVVLGEPEE 540
++NTSVYITGLP D+T+ +I F + G +K R KVYR+D GQVKGD LV + K SVDLA+ L+ E+ G ++VS A F + +EE E AA + G ++ K +VVL+ ++T EE AD N +LE D++ E K G V+S+ T T G + + F++ GA C +GRWF RQIEA L G+ LG+ EE
Sbjct: 129 NKNTSVYITGLPRDVTEEEIAETFKKCGVIKVDARDGSSRVKVYRDDDGQVKGDALVVFLKGPSVDLAITLLDQSELRAGDASTKMTVSAAKFEMKQSDKKEEKMAASDADAPGVAKPKKLTKEERKRAAVILKRQ----------EAAALGWDGF-----DDVVDLKKVIVVLKHMFTLEEMYADVNLRKELEEDVMEEAQKCGHVLSIKTYTTTKD-GVMTLRFKSPEGAESCLREWNGRWFAGRQIEASLWDGRTKLGKEEE 377
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: U4L6R8_PYROM (Similar to Splicing factor U2AF-associated protein 2 acc. no. O43120 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4L6R8_PYROM) HSP 1 Score: 103 bits (258), Expect = 2.490e-20 Identity = 80/255 (31.37%), Postives = 116/255 (45.49%), Query Frame = 0
Query: 286 AKSQNTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGH---PISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALV 529
A QNT+VYIT LP D T+A+I+ +FS+YG + R K+YRN+ G +KGD LV Y +P SV+LA+ L+ + +G PI V ADF+ + Q+E P +D A P + G VVVL+ ++T +E + DP DL+ D+ EC K G V +V + G V V F+ A C + M GR+F +Q+EA +
Sbjct: 118 APRQNTAVYITNLPLDTTEAEIKDIFSKYGVISEEIDTGKPRIKLYRNEDGTLKGDALVIYFRPESVNLAINMLDDSPLRIGGGGIPIRVQAADFSYKQ---QKEVPTQTSKKEKKKIIAKTQRLNNKLADWDD------------------DDPAAVKRAEPNKFGGK---VVVLKHMFTLQELEEDPTALLDLKEDIREECEKLGEVTNVVLYDQEED-GVVTVRFKEPTTAMSCVQMMAGRFFAGQQVEAYI 347
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A0D2BHU1_9EURO (Uncharacterized protein n=2 Tax=Exophiala TaxID=5583 RepID=A0A0D2BHU1_9EURO) HSP 1 Score: 101 bits (252), Expect = 1.290e-19 Identity = 80/267 (29.96%), Postives = 117/267 (43.82%), Query Frame = 0
Query: 282 GTAAAKSQ----NTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHP-----ISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVAT-PETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVT 530
G A KS+ NT+VY+T +P D Q +I+ VFS+ G + R K+Y +D GQ KGD LV Y +P SVDLA+ L+ + +G + V ADF+ Q+E P G D+ P + + VV+L+ ++T EE + DP +++ D+ EC K G V +V + P G V F N+ A C M+GRWFD+RQ+EA V+
Sbjct: 97 GEAGQKSKRPRVNTAVYVTSIPLDADQEEIQHVFSKCGVIAEEIDSGKPRIKMYEDDKGQFKGDALVVYFRPESVDLAIQMLDDSDFRLGSEGPAGKMKVQAADFSYKS---QQEAPAKTSKKDQKKIIKRTQKMM-----------------------GKLTDWDDDDPQAIPDTSSRWDKVVILKHMFTLEELEEDPAAMLEIKEDIREECSKLGEVTNVVLFDKEPA--GIASVRFSNAEAAAACVRLMNGRWFDERQLEAFVS 335
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: D5G6Y0_TUBMM (RRM domain-containing protein n=4 Tax=Tuber TaxID=36048 RepID=D5G6Y0_TUBMM) HSP 1 Score: 101 bits (252), Expect = 1.770e-19 Identity = 79/257 (30.74%), Postives = 117/257 (45.53%), Query Frame = 0
Query: 285 AAKSQNTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHE----ISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALV 529
A +NT+VYIT LP D T+ ++ VFS++G + R K+YRN+ G VKGD LV Y +P SV+LAV L+ + +S G I V ADF+ Q++ P +D +P + + DK VV+LR ++T ++ + DP DL+ D+ EC K G V +V + G V V F N+ A C MHGR+FD +++EA +
Sbjct: 132 APARKNTAVYITNLPPDTTEDEVNKVFSRFGVIAEEIDRGKPRIKLYRNEDGSVKGDALVVYFRPESVNLAVQMLDDSDFRFGVSEGGRIKVQPADFSYKA---QQDAPVRKNARDKKKVIAKTQKLNNKLADWD-------------------DDDPSKIPDITSKY--DK--VVILRHMFTLKQLEEDPTAILDLKEDIREECEKLGDVTNVVLYDKEED-GIVSVRFANAESAKACVGVMHGRFFDGQRVEAYI 361
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A0D2CQ56_9EURO (Uncharacterized protein n=1 Tax=Exophiala xenobiotica TaxID=348802 RepID=A0A0D2CQ56_9EURO) HSP 1 Score: 97.8 bits (242), Expect = 2.460e-18 Identity = 72/254 (28.35%), Postives = 111/254 (43.70%), Query Frame = 0
Query: 290 NTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHP-----ISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVT 530
NT++YIT +P D Q +I+ VFS+ G + R ++Y +D GQ KGD LV Y +P SVDLA+ ++ + +G + V ADF+ Q+E P G D+ P + + VV+L+ ++T EE + DP +++ D+ EC K G V +V + G V F N+ A C M+GRWFD+RQ+EA ++
Sbjct: 107 NTAIYITSIPLDADQEEIQQVFSKCGVIAEEIDSGKPRIRMYEDDKGQFKGDALVVYFRPESVDLAIQMMDDSDFRLGTEGPMGKMRVQAADFSYKS---QQEAPPKTNKRDQKKIIKRTQKMM-----------------------GKLTDWDDDDPQALPDTSSRWDKVVILKHMFTLEELEEDPAAMLEIKEDIREECAKLGPVTNVVLFDKEKD-GVASVRFSNAEAAAACVRLMNGRWFDERQLEAYIS 333 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig9.16725.1 ID=prot_C-linearis_contig9.16725.1|Name=mRNA_C-linearis_contig9.16725.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=601bpback to top |