prot_C-linearis_contig9.16725.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16725.1
Unique Nameprot_C-linearis_contig9.16725.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length601
Homology
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A6H5L1E0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1E0_9PHAE)

HSP 1 Score: 523 bits (1347), Expect = 5.040e-176
Identity = 378/490 (77.14%), Postives = 402/490 (82.04%), Query Frame = 0
Query:  119 VSLPLLATPQ-PPSAAPGQTLAAYAYPGG-----AXXXXXAGQA--MTPQQVAQEAIAKTMAAMQEKQLDQLQPGQVLDNRRGYIYGNLIGQMEKARLERAALKNENYVRRKDEIARRKRLGLPFDGLIDKSAIPSGNAGXXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGKVVLGEPEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDMGPLLQGAPDSPPPTDLNSFLESV 600
            +SLPLLATPQ PP AAPGQTL AYAYPG      A     AGQ   +TPQQVAQEAIAKTMAAM+E+Q  QLQPGQVLDNRRGYI+GNLIG+MEKARLERAA KNENYVRRKDEIARRKRLGLP DGLID   + +    XXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTA AK+QNTSVYITGLP+DITQAKIELVFSQ+GSVKR+KVYRN+ G+ KGDGLVT+AKP SVDLAV+K+NGHEISVG+PI+VSMADFNR K G   E  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             +D  GALPPLPEECGADKHPVVVLR VYTREES+ADP+FFDDLEADMLMECVKFGTVISVATPE PGYFG VV+TF  S GAN CAEAMHGRWFDQRQIEALVTGK VL +  EE  XXXXXXXXXXXXXX                E  MGPLLQG PDSPPP DLNSFLESV
Sbjct:  194 LSLPLLATPQQPPPAAPGQTLGAYAYPGVGVAPVAAPAPAAGQQQQLTPQQVAQEAIAKTMAAMKERQEQQLQPGQVLDNRRGYIHGNLIGKMEKARLERAAAKNENYVRRKDEIARRKRLGLPLDGLIDAKKLLA----XXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAGAKAQNTSVYITGLPSDITQAKIELVFSQHGSVKRSKVYRNEAGEAKGDGLVTFAKPASVDLAVSKMNGHEISVGYPITVSMADFNRTKSGTATEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------YDD--GALPPLPEECGADKHPVVVLRSVYTREESEADPHFFDDLEADMLMECVKFGTVISVATPEAPGYFGCVVITFRTSNGANACAEAMHGRWFDQRQIEALVTGKEVLSKEGEENGXXXXXXXXXXXXXXGDVREATGEKEEND--ETAMGPLLQGPPDSPPPADLNSFLESV 665          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: D7FR18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR18_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.640e-84
Identity = 213/431 (49.42%), Postives = 224/431 (51.97%), Query Frame = 0
Query:  171 MAAMQEKQLDQLQPGQVLDNRRGYIYGNLIGQMEKARLERAALKNENYVRRKDEIARRKRLGLPFDGLIDKSAIPSGNAGXXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGKVVLG-EPEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEDMGPLLQGAPDSPPPTDLNSFLESV 600
            MAAMQE+Q  QLQPGQVLDNRRGYI+GNLIG+MEKARLERAA KNENYVRRKDEIARRKRLGLP DGLID   +                                                                                                          LNG      +                                                                    +  ALPPLPEECGADKHPVVVLR VYTREES+ADP+FFDDLEADMLMECVKFGTVISVATPE PGYFG VV+TF+ S GAN CAEAMHGRWFDQRQIEALVTGK VLG E  E    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +GPLLQG PDSPPPTDLNSFLESV
Sbjct:    1 MAAMQERQEQQLQPGQVLDNRRGYIHGNLIGKMEKARLERAAAKNENYVRRKDEIARRKRLGLPLDGLIDAKKL----------------------------------------------------------------------------------------------------------LNGXXXXXDY--------------------------------------------------------------------HDSALPPLPEECGADKHPVVVLRSVYTREESEADPHFFDDLEADMLMECVKFGTVISVATPEEPGYFGCVVITFKTSDGANACAEAMHGRWFDQRQIEALVTGKEVLGKEGGENGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPLGPLLQGPPDSPPPTDLNSFLESV 257          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A7S2R3X3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3X3_9STRA)

HSP 1 Score: 190 bits (482), Expect = 4.070e-50
Identity = 127/333 (38.14%), Postives = 173/333 (51.95%), Query Frame = 0
Query:  207 RLERAALKNENYVRRKDEIARRKRLGL---PFDGLI---DKSAIPSGNAGXXXXXXXXXXXXXXXXXXXXXXXXXQSRAGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFN---RNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQR--QIEAL 528
            RL+RA  KN +Y+RRKD   R + LG+   P D      D++    G  G                         QSR GIG    +++NTSVY+ GLP  IT A+++L+FS +G VKR KVYR+D G+ KGD LVTY K  SV  A+ K+NGH I+ G  + VS ADF+   ++  G ++E                                    GP +D  E   ED      PLP+EC  ++ P  VLR VYT E++ +  +F DDLEA++L EC++FG+V+ V TP  P Y G+V VTFE+   A  C E M GR+FD R  Q++AL
Sbjct:   91 RLQRAMEKNIDYIRRKDMEERARILGMGGDPDDAWSFGPDQTGKKRGRGGNRKVE--------------------QSRLGIGAGRVEAENTSVYVAGLPQSITWAQMDLLFSPFGRVKRIKVYRDDAGKPKGDALVTYVKQGSVASAIQKMNGHTIAPGMKLHVSPADFSHKDQSVDGGEDEDGVAEDEAESSGGGVGRANDAEDVDGQGMEAVEALVGPLKD--EDFDEDGVPRFTPLPDECRPEQCPTCVLRNVYTAEQAASTSSFLDDLEAEILRECIQFGSVVCVVTPSQPYYVGAVCVTFEDIQAAQHCGEVMDGRFFDYRTMQVQAL 401          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A835YW78_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW78_9STRA)

HSP 1 Score: 179 bits (455), Expect = 3.290e-48
Identity = 111/264 (42.05%), Postives = 145/264 (54.92%), Query Frame = 0
Query:  276 QSRA-GIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQ-----VKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPN-FFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGK 532
            QSR+ G+G AAA+     VY+TGLP   TQA++E +FS +G ++R KVY  DG +      KGD LVTY KP SVD AV +LNGH+++ G  I V+ ADF+  +GG      XXX                                                 P LPE+C A+++PVV+L  VYT EE   +P+ F+ +LEADML EC +FGTV  V T E   Y GSV +TF +S GA +CA+ MHGR+FD RQIE  + GK
Sbjct:    7 QSRSMGLGAAAARQAQCGVYVTGLPPTTTQAQLEQLFSAHGPIRRVKVYMEDGDKDASTRCKGDALVTYVKPSSVDTAVPRLNGHQVAPGFTIKVTQADFSHKEGGRDSXXXXXXG------------------------------------------------PALPEQCCAEQYPVVILHNVYTAEEVTENPDGFYSELEADMLGECARFGTVRCVVTLEGE-YEGSVAITFADSAGARECAKTMHGRFFDGRQIEVDIVGK 221          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A4D9CYD4_9STRA (RRM domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYD4_9STRA)

HSP 1 Score: 159 bits (401), Expect = 3.940e-39
Identity = 99/255 (38.82%), Postives = 138/255 (54.12%), Query Frame = 0
Query:  279 AGIGTAAAKSQNTSVYITGLPADITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVTGKV 533
            AG+G  AA  ++ SVY+ GL A+ T  +++++F+ YG ++R KVYR+  G+ KGD LVTYA+P S   A+ KLNG+ ++  H + +S ADF+  + G                                         P ++  E   EDY      LP EC ADK+PVV+LR VY   E+ AD +F + LE DML ECV+ G V  + TPE   Y G+V V F +   A  CA+AMHGR+FD RQI+  + GKV
Sbjct:  174 AGVGAEAAAVESASVYVEGLMAETTWDQLDILFAPYGRLRRIKVYRDAHGKPKGDALVTYARPGSTAAAIKKLNGYALAPNHCLRLSQADFSYKEEGANVHEGIGFDDHMAH--------------------------PAQE--EDEQEDYE----TLPPECEADKYPVVILRNVYDPTET-ADEDFAE-LETDMLQECVRHGEVKRIVTPEGDYYAGAVAVVFVSFEAAQACAKAMHGRFFDGRQIDVELQGKV 394          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A7S0KC46_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KC46_9CHLO)

HSP 1 Score: 112 bits (280), Expect = 5.710e-23
Identity = 89/265 (33.58%), Postives = 124/265 (46.79%), Query Frame = 0
Query:  288 SQNTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHP---ISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEA-LVTGKVVLGEPEE 540
            ++NTSVYITGLP D+T+ +I   F + G +K        R KVYR+D GQVKGD LV + K  SVDLA+  L+  E+  G     ++VS A F   +   +EE                                           E AA  + G      ++    K  +VVL+ ++T EE  AD N   +LE D++ E  K G V+S+ T  T    G + + F++  GA  C    +GRWF  RQIEA L  G+  LG+ EE
Sbjct:  129 NKNTSVYITGLPRDVTEEEIAETFKKCGVIKVDARDGSSRVKVYRDDDGQVKGDALVVFLKGPSVDLAITLLDQSELRAGDASTKMTVSAAKFEMKQSDKKEEKMAASDADAPGVAKPKKLTKEERKRAAVILKRQ----------EAAALGWDGF-----DDVVDLKKVIVVLKHMFTLEEMYADVNLRKELEEDVMEEAQKCGHVLSIKTYTTTKD-GVMTLRFKSPEGAESCLREWNGRWFAGRQIEASLWDGRTKLGKEEE 377          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: U4L6R8_PYROM (Similar to Splicing factor U2AF-associated protein 2 acc. no. O43120 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4L6R8_PYROM)

HSP 1 Score: 103 bits (258), Expect = 2.490e-20
Identity = 80/255 (31.37%), Postives = 116/255 (45.49%), Query Frame = 0
Query:  286 AKSQNTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGH---PISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALV 529
            A  QNT+VYIT LP D T+A+I+ +FS+YG +         R K+YRN+ G +KGD LV Y +P SV+LA+  L+   + +G    PI V  ADF+  +   Q+E P                                             +D A      P + G     VVVL+ ++T +E + DP    DL+ D+  EC K G V +V   +     G V V F+    A  C + M GR+F  +Q+EA +
Sbjct:  118 APRQNTAVYITNLPLDTTEAEIKDIFSKYGVISEEIDTGKPRIKLYRNEDGTLKGDALVIYFRPESVNLAINMLDDSPLRIGGGGIPIRVQAADFSYKQ---QKEVPTQTSKKEKKKIIAKTQRLNNKLADWDD------------------DDPAAVKRAEPNKFGGK---VVVLKHMFTLQELEEDPTALLDLKEDIREECEKLGEVTNVVLYDQEED-GVVTVRFKEPTTAMSCVQMMAGRFFAGQQVEAYI 347          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A0D2BHU1_9EURO (Uncharacterized protein n=2 Tax=Exophiala TaxID=5583 RepID=A0A0D2BHU1_9EURO)

HSP 1 Score: 101 bits (252), Expect = 1.290e-19
Identity = 80/267 (29.96%), Postives = 117/267 (43.82%), Query Frame = 0
Query:  282 GTAAAKSQ----NTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHP-----ISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVAT-PETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVT 530
            G A  KS+    NT+VY+T +P D  Q +I+ VFS+ G +         R K+Y +D GQ KGD LV Y +P SVDLA+  L+  +  +G       + V  ADF+      Q+E P                                          G   D+    P    +  +    VV+L+ ++T EE + DP    +++ D+  EC K G V +V    + P   G   V F N+  A  C   M+GRWFD+RQ+EA V+
Sbjct:   97 GEAGQKSKRPRVNTAVYVTSIPLDADQEEIQHVFSKCGVIAEEIDSGKPRIKMYEDDKGQFKGDALVVYFRPESVDLAIQMLDDSDFRLGSEGPAGKMKVQAADFSYKS---QQEAPAKTSKKDQKKIIKRTQKMM-----------------------GKLTDWDDDDPQAIPDTSSRWDKVVILKHMFTLEELEEDPAAMLEIKEDIREECSKLGEVTNVVLFDKEPA--GIASVRFSNAEAAAACVRLMNGRWFDERQLEAFVS 335          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: D5G6Y0_TUBMM (RRM domain-containing protein n=4 Tax=Tuber TaxID=36048 RepID=D5G6Y0_TUBMM)

HSP 1 Score: 101 bits (252), Expect = 1.770e-19
Identity = 79/257 (30.74%), Postives = 117/257 (45.53%), Query Frame = 0
Query:  285 AAKSQNTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHE----ISVGHPISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALV 529
            A   +NT+VYIT LP D T+ ++  VFS++G +         R K+YRN+ G VKGD LV Y +P SV+LAV  L+  +    +S G  I V  ADF+      Q++ P                                             +D    +P +  +   DK  VV+LR ++T ++ + DP    DL+ D+  EC K G V +V   +     G V V F N+  A  C   MHGR+FD +++EA +
Sbjct:  132 APARKNTAVYITNLPPDTTEDEVNKVFSRFGVIAEEIDRGKPRIKLYRNEDGSVKGDALVVYFRPESVNLAVQMLDDSDFRFGVSEGGRIKVQPADFSYKA---QQDAPVRKNARDKKKVIAKTQKLNNKLADWD-------------------DDDPSKIPDITSKY--DK--VVILRHMFTLKQLEEDPTAILDLKEDIREECEKLGDVTNVVLYDKEED-GIVSVRFANAESAKACVGVMHGRFFDGQRVEAYI 361          
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Match: A0A0D2CQ56_9EURO (Uncharacterized protein n=1 Tax=Exophiala xenobiotica TaxID=348802 RepID=A0A0D2CQ56_9EURO)

HSP 1 Score: 97.8 bits (242), Expect = 2.460e-18
Identity = 72/254 (28.35%), Postives = 111/254 (43.70%), Query Frame = 0
Query:  290 NTSVYITGLPADITQAKIELVFSQYGSVK--------RAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAKLNGHEISVGHP-----ISVSMADFNRNKGGPQEETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVLRRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVVTFENSVGANKCAEAMHGRWFDQRQIEALVT 530
            NT++YIT +P D  Q +I+ VFS+ G +         R ++Y +D GQ KGD LV Y +P SVDLA+  ++  +  +G       + V  ADF+      Q+E P                                          G   D+    P    +  +    VV+L+ ++T EE + DP    +++ D+  EC K G V +V   +     G   V F N+  A  C   M+GRWFD+RQ+EA ++
Sbjct:  107 NTAIYITSIPLDADQEEIQQVFSKCGVIAEEIDSGKPRIRMYEDDKGQFKGDALVVYFRPESVDLAIQMMDDSDFRLGTEGPMGKMRVQAADFSYKS---QQEAPPKTNKRDQKKIIKRTQKMM-----------------------GKLTDWDDDDPQALPDTSSRWDKVVILKHMFTLEELEEDPAAMLEIKEDIREECAKLGPVTNVVLFDKEKD-GVASVRFSNAEAAAACVRLMNGRWFDERQLEAYIS 333          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1E0_9PHAE5.040e-17677.14RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FR18_ECTSI1.640e-8449.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2R3X3_9STRA4.070e-5038.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YW78_9STRA3.290e-4842.05RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9CYD4_9STRA3.940e-3938.82RRM domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7S0KC46_9CHLO5.710e-2333.58Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
U4L6R8_PYROM2.490e-2031.37Similar to Splicing factor U2AF-associated protein... [more]
A0A0D2BHU1_9EURO1.290e-1929.96Uncharacterized protein n=2 Tax=Exophiala TaxID=55... [more]
D5G6Y0_TUBMM1.770e-1930.74RRM domain-containing protein n=4 Tax=Tuber TaxID=... [more]
A0A0D2CQ56_9EURO2.460e-1828.35Uncharacterized protein n=1 Tax=Exophiala xenobiot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 196..228
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 292..365
e-value: 9.2E-16
score: 68.4
coord: 447..528
e-value: 1.2
score: 5.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 293..356
e-value: 1.3E-12
score: 47.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 291..369
score: 15.34
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 262..382
e-value: 1.6E-18
score: 68.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 443..537
e-value: 3.1E-18
score: 67.7
IPR034393TatSF1-likePANTHERPTHR15608SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2coord: 445..532
coord: 95..373
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 289..526

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3384241..3389325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16725.1mRNA_C-linearis_contig9.16725.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3384062..3389439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16725.1 ID=prot_C-linearis_contig9.16725.1|Name=mRNA_C-linearis_contig9.16725.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=601bp
MNPPPPAGYYNNNAAYGTTAPAPSSAQHQQQYATQQPVTPAASYGAYAQG
TYTAPPAATSAVHHQQQYGAQPQHHYAAAAYGAYPQQQQQLPQQQYQHQH
QQHHHQHQQQQTQQQKQQVSLPLLATPQPPSAAPGQTLAAYAYPGGAPPP
PPAGQAMTPQQVAQEAIAKTMAAMQEKQLDQLQPGQVLDNRRGYIYGNLI
GQMEKARLERAALKNENYVRRKDEIARRKRLGLPFDGLIDKSAIPSGNAG
GGGAGGGGGGGKASVRHQQAAGGGGQSRAGIGTAAAKSQNTSVYITGLPA
DITQAKIELVFSQYGSVKRAKVYRNDGGQVKGDGLVTYAKPVSVDLAVAK
LNGHEISVGHPISVSMADFNRNKGGPQEETPQPPPPPPEQQPPSPPPPPP
PPHSSNGEEYGGGGEGPGEDPGEGAAEDYAGALPPLPEECGADKHPVVVL
RRVYTREESDADPNFFDDLEADMLMECVKFGTVISVATPETPGYFGSVVV
TFENSVGANKCAEAMHGRWFDQRQIEALVTGKVVLGEPEEEQNQHRSYEP
DQEQEQTQGGDGTAGKGDKEGEGEEDMGPLLQGAPDSPPPTDLNSFLESV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR034393TatSF1-like
IPR035979RBD_domain_sf