prot_C-linearis_contig9.16713.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16713.1
Unique Nameprot_C-linearis_contig9.16713.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length273
Homology
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: D7FHE6_ECTSI (UPF0029 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE6_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 7.260e-64
Identity = 106/138 (76.81%), Postives = 117/138 (84.78%), Query Frame = 0
Query:   61 ASSSSASTPSTAPEEIVTVCGEAETEETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAER 198
            A +SS+S+P+   E+IVTVCGE+ETEETIKKSRFIGRCGPA TFEE KALLGRV++EHPKARHSCWAW+GLGD+HRFSDD EPGGTAGQPILGGIESEG+SE             LGTGGLCRAYGGASR CLQAAER
Sbjct:   10 AEASSSSSPADQ-EQIVTVCGESETEETIKKSRFIGRCGPAATFEEGKALLGRVLKEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGQPILGGIESEGVSE-------------LGTGGLCRAYGGASRQCLQAAER 133          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: A0A836CPZ6_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPZ6_9STRA)

HSP 1 Score: 191 bits (485), Expect = 5.330e-57
Identity = 106/212 (50.00%), Postives = 135/212 (63.68%), Query Frame = 0
Query:   74 EEIVTVCGEAETEETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAE--------------------RETRTPVLELVVKAPVGCVGSVYHAVTECRRLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKGAA 265
            ++I TV G    E+TIKKSRFIG C  A TF +  ALL  V  +HPKARH CWAWQG+  E R++DD EP GTAGQPIL  I+ EGLS+  V V RY GG+ LGTGGL RAYGG +RLCL+AAE                    +  + P  E+ V+AP+  VG++Y A  +C R+ EEFTA+ +V+L V+ E A  + V   V+DAT+GAA
Sbjct:    9 DDITTVVGITAAEDTIKKSRFIGYCCAAPTFADGMALLDVVKGDHPKARHVCWAWQGVKTESRYNDDGEPSGTAGQPILASIQGEGLSQTFVAVVRYFGGVLLGTGGLVRAYGGTARLCLRAAENGGALGGGLXXXXXXXXXXXKTVKIPQAEVRVEAPMALVGALYAATNKCVRVREEFTAD-AVILTVSTERALAQGVIDHVIDATRGAA 219          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: W7TTS7_9STRA (Thymidylate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTS7_9STRA)

HSP 1 Score: 174 bits (442), Expect = 5.380e-50
Identity = 95/192 (49.48%), Postives = 132/192 (68.75%), Query Frame = 0
Query:   78 TVCGEAETEETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLELVVKAPVGCVGSVYHAVTECRRLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKGAAEIVE 269
            T+ G AE EE IKKSRF+ R  PA++F EA+  L  V     KA H+CWAW+G G+E R SDD EPGGTAG+PIL  IESE L +VMVVVTRY GGIKLG GGL RAYGG +R CL+ AE  T  P + + ++AP+   G+V+  +    ++ E++TAE  +++ V V+ A ++ +R+++ DAT+G+  + E
Sbjct:   80 TLAGPAEYEEIIKKSRFLSRATPASSFAEAQTFLRDVGDL--KASHNCWAWRGHGEE-RSSDDGEPGGTAGRPILSAIESEDLVDVMVVVTRYFGGIKLGAGGLVRAYGGVARTCLRNAETLTHIPKVLVRLRAPLSMSGAVFQTINRTDKIKEDYTAE-EIIVDVKVDAALIDNLRQQLQDATRGSGSLEE 267          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: UPI000369F5B1 (IMPACT family protein n=1 Tax=Calidithermus timidus TaxID=307124 RepID=UPI000369F5B1)

HSP 1 Score: 159 bits (403), Expect = 4.920e-45
Identity = 94/191 (49.21%), Postives = 125/191 (65.45%), Query Frame = 0
Query:   76 IVTVCGEAETEETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLELVVKAPVGCVGSVYHAVTECRRLSEEFTA--EGSVVLRVAVEVAQVEEVRRRVVDATKGA 264
            ++T+    E E+ ++KSRFI R  PATT EEA A L RV +  P+A H+CWA+Q +G  +RF DD EPGGTAGQPIL  I+++GL  VMVVVTRY GG+KLG GGL RAYGG +  CL+ A +    P L L ++AP    G VY A+ E  +L+ EF    E  +VL   +E A++E  R  + DA++GA
Sbjct:    1 MITLAAPCELEQLVQKSRFIARAAPATTPEEALAFLERVRE--PEATHNCWAYQ-IGLLYRFCDDGEPGGTAGQPILRAIQAQGLDRVMVVVTRYFGGVKLGAGGLARAYGGVAAECLRQAPKREIVPRLRLRLEAPFEMAGQVY-ALLERWKLAREFEGYTEAGLVLEFVLEEARLEAFRVALRDASRGA 187          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: D7BIB8_MEISD (UPF0029 domain-containing protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) TaxID=526227 RepID=D7BIB8_MEISD)

HSP 1 Score: 157 bits (396), Expect = 5.050e-44
Identity = 91/180 (50.56%), Postives = 120/180 (66.67%), Query Frame = 0
Query:   86 EETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLELVVKAPVGCVGSVYHAVTECR--RLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKG 263
            E+ I+KSRFI +  P  + E A A L R V E P A H+CWA+Q +G  +RFSDD EPGGTAGQPIL  I+++GL +VMVVVTRY GGIKLG GGL RAYGG +  CL+AA +    P++ L ++AP    G VY  +   +  R SE ++  G VV  + +E A++EE RR +VD T+G
Sbjct:   12 EQHIQKSRFIAKAAPVESPESALAFL-RGVSE-PAASHNCWAYQ-IGLHYRFSDDGEPGGTAGQPILRAIQAQGLDQVMVVVTRYFGGIKLGAGGLVRAYGGIAAQCLRAAPKREIVPLVRLQLEAPFELAGQVYGLLERWKLARASETYSQAGLVV-EIVIEEARLEEFRRAIVDGTRG 187          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: A0A399EIR5_9DEIN (IMPACT family member YigZ n=1 Tax=Calidithermus roseus TaxID=1644118 RepID=A0A399EIR5_9DEIN)

HSP 1 Score: 155 bits (392), Expect = 2.130e-43
Identity = 91/191 (47.64%), Postives = 126/191 (65.97%), Query Frame = 0
Query:   76 IVTVCGEAETEETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLELVVKAPVGCVGSVYHAVTECR--RLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKGA 264
            ++T+    E E+ ++KSRFI R  PATT EEA A L RV +  P+A H+CWA+Q +G  +RFSDD EPGGTAGQPIL  I+++GL  VMVVVTRY GG+KLG GGL RAYGG +  CL+ A +    P L L ++AP    G +Y  +   +  R SE +T E  +V+ + +E A++E  +  + DA++GA
Sbjct:    1 MITLAAPYELEQLVQKSRFIARAAPATTPEEALAFLERVRE--PEATHNCWAYQ-IGLLYRFSDDGEPGGTAGQPILRAIQAQGLDRVMVVVTRYFGGVKLGAGGLVRAYGGIAAECLRQAPKREIVPRLRLRLEAPFELSGPIYALLERWKLARESEGYT-EAGLVVELVLEEARLEAFQAALRDASRGA 187          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: A0A7S3UXU7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXU7_HETAK)

HSP 1 Score: 152 bits (383), Expect = 5.860e-42
Identity = 89/184 (48.37%), Postives = 118/184 (64.13%), Query Frame = 0
Query:   84 ETEETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEH--RFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLELVVKAPVGCVGSVYHAVTECRRLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKGAA 265
            E EE +KKSRFI R  PATT++EAK  +  V +  PKA H+CWA+    D    RF+DD EPGGTAG+PIL  I++E L +V V VTRY GG KLGTGGL RAYGGA+R CL   ER  +   +++ ++ P+ CVG VY  + E  R++EE+ A  S+ +R       +  V +RV DA +G A
Sbjct:   18 EHEEIVKKSRFIARAYPATTWKEAKEFIEMVSE--PKASHNCWAFIPGSDPTAVRFNDDGEPGGTAGKPILQAIQAEELRDVAVCVTRYFGGTKLGTGGLIRAYGGAARNCLILTERCFKEATVQVQIEVPLDCVGPVYQILNEHVRVAEEYGA-ASLAVRFLAYEKDLGRVEQRVRDACRGRA 198          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: F2NP75_MARHT (Uncharacterized protein family UPF0029, Impact, N-terminal protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) TaxID=869210 RepID=F2NP75_MARHT)

HSP 1 Score: 149 bits (375), Expect = 6.690e-41
Identity = 90/184 (48.91%), Postives = 115/184 (62.50%), Query Frame = 0
Query:   87 ETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCL-QAAERETRTPVLELVVKAPVGCVGSVYHAVTE--CRRLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKGAAEI 267
            E IKKSRFI    P  T EEA A L  V    P+A H+CWA++ +G  +RFSDD EPGGTAGQPIL  IE +GL  VMVVVTRY GGIKLG GGL RAYGG +  CL QA +RE R P + + +  P   +G VY  +      + +E +T  G + L + ++ A +E  RR + DAT+G A +
Sbjct:   12 EEIKKSRFIAHAAPVETPEEAMAFLEAV--RDPQATHNCWAYK-IGQAYRFSDDGEPGGTAGQPILRAIEGQGLDHVMVVVTRYFGGIKLGAGGLVRAYGGVAATCLRQAPKREVR-PQVPVQLSVPFEAMGGVYPVLERFAVTKEAERYTQAG-LELALRLDAADLEAFRRALTDATRGKARV 190          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: A0A399E6P3_9DEIN (IMPACT family member YigZ n=2 Tax=Calidithermus TaxID=2747271 RepID=A0A399E6P3_9DEIN)

HSP 1 Score: 145 bits (366), Expect = 1.720e-39
Identity = 91/198 (45.96%), Postives = 123/198 (62.12%), Query Frame = 0
Query:   76 IVTVCGEAETEETIKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLELVVKAPVGCVGSVYHAVTE--CRRLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKGA--AEIVE 269
            + T+    E E+ I+KSRFI R  PA T EEA A L RV +   +A H+CWA++ +G  +RFSDD EPGGTAGQPIL  IE +GL  VMVVVTR+ GG+KLGTGGL RAYGG +  CL+ A R    P + + ++ P    G VY  +      R +E +TA G + L + +E   +E  +  + DA++G   AE+VE
Sbjct:    1 MTTLAAPHELEQLIQKSRFIARAAPAATPEEALAFLERVRER--EATHNCWAYR-VGPLYRFSDDGEPGGTAGQPILRAIEGQGLDRVMVVVTRHFGGVKLGTGGLVRAYGGVAAECLRQAPRREVRPRVRVALEVPFELSGVVYGLLERGGLPRDAEGYTARG-LRLELTLEAGALEAFQAALRDASRGVLRAEVVE 194          
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Match: A0A836C1E9_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C1E9_9CHLO)

HSP 1 Score: 145 bits (367), Expect = 2.290e-39
Identity = 80/177 (45.20%), Postives = 113/177 (63.84%), Query Frame = 0
Query:   89 IKKSRFIGRCGPATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQPILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLELVVKAPVGCVGSVYHAVT--ECRRLSEEFTAEGSVVLRVAVEVAQVEEVRRRVVDATKG 263
            +KKS+F+ R  P ++  EA  L+       P A H+C+A++    E+R SDD EPGGTAG+PIL  IE EGL  V V+VTRY GGIKLG GGL RAYGGA++ CL+ A R      +E+ V  P G +G+VY  +   +C RL+EE+ + G+V++R  V+  ++E ++  V D T G
Sbjct:   29 VKKSKFVVRAWPVSSGSEALELIKEASD--PGASHNCFAYRIGSSEYRSSDDGEPGGTAGRPILSAIEGEGLERVAVLVTRYFGGIKLGAGGLVRAYGGAAKECLRLAPRAFAKARVEVQVNVPYGELGTVYGCLDMHQCTRLAEEYGSSGTVLIRALVDADKLERLQTAVADGTGG 203          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHE6_ECTSI7.260e-6476.81UPF0029 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CPZ6_9STRA5.330e-5750.00Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
W7TTS7_9STRA5.380e-5049.48Thymidylate synthase n=1 Tax=Nannochloropsis gadit... [more]
UPI000369F5B14.920e-4549.21IMPACT family protein n=1 Tax=Calidithermus timidu... [more]
D7BIB8_MEISD5.050e-4450.56UPF0029 domain-containing protein n=1 Tax=Meiother... [more]
A0A399EIR5_9DEIN2.130e-4347.64IMPACT family member YigZ n=1 Tax=Calidithermus ro... [more]
A0A7S3UXU7_HETAK5.860e-4248.37Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F2NP75_MARHT6.690e-4148.91Uncharacterized protein family UPF0029, Impact, N-... [more]
A0A399E6P3_9DEIN1.720e-3945.96IMPACT family member YigZ n=2 Tax=Calidithermus Ta... [more]
A0A836C1E9_9CHLO2.290e-3945.20Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001498Impact, N-terminalPFAMPF01205UPF0029coord: 90..193
e-value: 8.3E-27
score: 93.6
IPR036956Impact, N-terminal domain superfamilyGENE3D3.30.230.30coord: 72..202
e-value: 2.1E-41
score: 142.6
IPR023582Impact familyPANTHERPTHR16301IMPACT-RELATEDcoord: 60..268
NoneNo IPR availablePANTHERPTHR16301:SF18coord: 60..268
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..272
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 77..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3272239..3276469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16713.1mRNA_C-linearis_contig9.16713.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3272162..3277166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16713.1 ID=prot_C-linearis_contig9.16713.1|Name=mRNA_C-linearis_contig9.16713.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=273bp
MNLLFCVSVLGAAVVRNSPPPHLRLVRSSAVVAVDSSRPSGRAIAPGSSR
RNWKQRPGVLASSSSASTPSTAPEEIVTVCGEAETEETIKKSRFIGRCGP
ATTFEEAKALLGRVVQEHPKARHSCWAWQGLGDEHRFSDDREPGGTAGQP
ILGGIESEGLSEVMVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERET
RTPVLELVVKAPVGCVGSVYHAVTECRRLSEEFTAEGSVVLRVAVEVAQV
EEVRRRVVDATKGAAEIVEEDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001498Impact_N
IPR036956Impact_N_sf
IPR023582Impact
IPR020568Ribosomal_S5_D2-typ_fold