prot_C-linearis_contig9.16703.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16703.1
Unique Nameprot_C-linearis_contig9.16703.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length704
Homology
BLAST of mRNA_C-linearis_contig9.16703.1 vs. uniprot
Match: D8LSM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM7_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 3.100e-192
Identity = 315/448 (70.31%), Postives = 350/448 (78.12%), Query Frame = 0
Query:  261 ERRRPVAPLFSFPPGPRVQRTEAEESLQEVLPMQQRLVKYLTEDRIFGAQIMCSLYFFTSAVAYSVDSVKFRGCYQTALAALTLKQWGTVLGRVRRVLVPHLLYEPQSRYVKYKARVSALALDPAVQGIVYCAIFMFMPLGHALLPLLLKESVYLLWVVKEVLQIAAPGLVDMLSSLFEPLMIVFMTAGDGEKWRSTPAGKKRLLLGRRLAQVCFKLEMMMPFSVALRVLPGAVQASLAAGAGVAAAGGSAEQAGRAMGEETAKAVXXXXXXXXXXXXXXXXXXXVYGQIARALPLMKVGMLMLVYVKLLTVKNGQLEDDVRILKGLKVRGYNCEWLEQAADSVVFGKMVGCPWWAGLLASAFALLPNHEATKTVMASDDKLKTFGMTVLNLAIGRTPGVEDDEXXXXXXXXXXXGEEVSTVPK------TGMAKIAKIAAIATGISD 702
            ERRRPVAPLFSFPPGPRV+RTEAE+ LQEVLP+QQRLVKYLTEDR+FG QI+CS+YFF SAVAY +DS KF G YQ ALA LTLKQWGTV+GRVRRVLVPHL+YEPQ RYVKY+ARVSALALDPAVQGIVYC IFM MPL  AL+PLLLKESVYLLWV+KE LQI APGLV+ L++L EPLM VFMTAGD EKWR TPAG+KRLLLGRRLAQ CFKLEM+MPF VALRVLP  +Q SL AG GVA  G  AE A    G                            GQ+ RALPL+KV +L++ YVKLL VKNGQLEDDVRIL GLK+RGY+CEW+E+  DSVVFG MVGCPWWAGLLA AF+LLPNHE TK VMASDDKLKT GMT+LN AIGRTPG +DD XXXXXXX     +  S          + MAKIAK+AA+ATG+SD
Sbjct:  250 ERRRPVAPLFSFPPGPRVRRTEAEDGLQEVLPVQQRLVKYLTEDRVFGVQILCSIYFFMSAVAYLMDSTKFGGSYQAALAVLTLKQWGTVVGRVRRVLVPHLIYEPQ-RYVKYRARVSALALDPAVQGIVYCGIFMLMPLSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSEPLMSVFMTAGDSEKWRDTPAGEKRLLLGRRLAQACFKLEMVMPFGVALRVLPAVLQTSLGAGGGVA-DGEGAEGAAAGAG----------------------------GQLGRALPLVKVLVLVMAYVKLLVVKNGQLEDDVRILSGLKIRGYDCEWIERGVDSVVFGMMVGCPWWAGLLAVAFSLLPNHEVTKKVMASDDKLKTLGMTLLNKAIGRTPGADDDXXXXXXXXGSGEKDGSSXXXXXXXXXXSRMAKIAKVAAVATGVSD 667          
BLAST of mRNA_C-linearis_contig9.16703.1 vs. uniprot
Match: A0A6H5KS72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS72_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 6.850e-75
Identity = 147/222 (66.22%), Postives = 161/222 (72.52%), Query Frame = 0
Query:  368 SRYVKYKARVSALALDPAVQGIVYCAIFMFMPLGHALLPLLLKESVYLLWVVKEVLQIAAPGLVDMLSSLFEPLMIVFMTAGDGEKWRSTPAGKKRLLLGRRLAQVCFKLEMMMPFSVALRVLPGAVQASLAAGAGVAAAGGSAEQAGRAMGEETAKAVXXXXXXXXXXXXXXXXXXXVYGQIARALPLMKVGMLMLVYVKLLTVKNGQLEDDVRILKGLKV 589
            SRYVKY+ARVSALALDPAVQGIVYC IFM MPL  AL+PLLLKESVYLLWV+KE LQI APGLV+ L++L EPLM VFMTAGD EKWR TPAG+KRLLLGRRLAQ CFKLEM+MPF VALRVLP  +QASL AG  VA  G  AE A    G                            GQ+ R LPL+KV +L++ YVKLL VKNGQLEDDVRIL GLKV
Sbjct:   15 SRYVKYRARVSALALDPAVQGIVYCGIFMLMPLSLALIPLLLKESVYLLWVMKEALQITAPGLVETLTTLSEPLMSVFMTAGDSEKWRDTPAGEKRLLLGRRLAQACFKLEMVMPFGVALRVLPAVLQASLGAGGSVA-DGEGAEGAAAGAG----------------------------GQLGRVLPLVKVLVLVMAYVKLLVVKNGQLEDDVRILSGLKV 207          
BLAST of mRNA_C-linearis_contig9.16703.1 vs. uniprot
Match: A0A835YJH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.050e-40
Identity = 125/352 (35.51%), Postives = 172/352 (48.86%), Query Frame = 0
Query:  281 TEAEESLQEVLPMQQRLVKYLTEDRIFGAQIMCSLYFFTSAVAYSVDSVKFRGC-----YQTALAALTLKQWGTVLGRVRRVLVPHLLYEPQSRYVKYKARVSALALDPAVQGIVYCAIFMFM--PLGHALLPLLLKESVYLLWVVKEVLQIAAPGLVDMLSSLFEPLMIVFMTAGDGEKWRSTPAGKKRLLLGRRLAQVCFKLEMMMPFSVALRVLPGAVQAS--LAAGAGVAAAGGSAEQAGRAMGEETAKAVXXXXXXXXXXXXXXXXXXXVYGQIARALPLMKVGMLMLVYVKLLTVKNGQLEDDVRILKGLKVRGYNCEWLEQAADSVVFGKMVGCPWWAGLLASAF 623
            T AE  L   LP+QQRL+KY T+D++F  QI  SLYF  +A   ++ S           YQ AL AL +K W  VLGR+RR LVP L  EP  ++  ++AR  ALA DPAVQ  ++CA+ +    PL  AL PL L+E  YL  V +EV+ IAAP  +  L +L      V +  GD   WR+   G + + +GRR++Q CFKLE+    +  LR  P A++A   LAA A  A                                                   + +G     Y +LL+V++ QL  DVR+L GLK+ G    WLE   DS ++ +M+G P W   L + F
Sbjct:   30 TAAEAGLDGFLPLQQRLIKYFTDDKLFTVQIAGSLYFAANAAILALSSAPDASAARARAYQGALLALIIKYWCVVLGRMRRTLVPGLAREP-GKFGLFRARARALARDPAVQTSLFCALALTRQPPLSAALAPLALREGAYLFLVAREVVSIAAPRALPALGALVRWPAAVLVAKGDVRAWRAMGEGAQLVEVGRRVSQACFKLEVAALGAALLRDYPRAMKADNKLAAAAAFA---------------------------------------------------LYIG----AYAQLLSVRHAQLGGDVRVLSGLKLGGVGLGWLELVVDSALYARMLGLPRWTAFLMAVF 325          
BLAST of mRNA_C-linearis_contig9.16703.1 vs. uniprot
Match: A0A836CE38_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE38_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.860e-18
Identity = 84/257 (32.68%), Postives = 119/257 (46.30%), Query Frame = 0
Query:  268 PLFSFPPGPRVQRTEAEESLQEVLPMQQRLVKYLTEDRIFGAQIMCSLYFFTSAV-------AYSVDSVKFRGCYQTALAALTLKQWGTVLGRVRRVLVPHLLYEPQS-----RYVKYKARVSALALDPAVQGIVYCAIFMFM--------------PLGHALLPLLLKESVYLLWVVKEVLQIAAP--GLVDMLSSLFEPLMIVFMTAGDGEKWRSTPAGKKRLLLGRRLAQVCFKLEMMMPFSVALRVLPGAVQA 496
            PLF+ P  P    T AE  L+  LP+QQRLV+Y T+DR F  Q   SL+F   A        A ++D ++    Y++ALA +  K    +  RVRRV +P LL           Y +++AR +ALA DPA Q +VYCA+   +                     PL++ E  +L           AP   L    S L +  M   +  GD + W+     + R  +GRR+AQ   KLE+ +   V LRV P A+ A
Sbjct:  114 PLFNAPLRPGRAHTVAEAGLEGFLPLQQRLVRYFTDDRAFALQAAGSLWFAAHAALTLAAPSAAAMDPLRM---YRSALAGVAAKNAALLAQRVRRVALPPLLAAEAPGGGARAYARFRARAAALARDPAAQALVYCALMATLGGSGXXXXXXXXXXXXXXXXXPLVVNEGAWLXXXXXXXXXXXAPPRALRAAASRLAQWPMAALVARGDVKAWQEMGEAEWRAAVGRRVAQASLKLEVAVMALVLLRVYPRAMTA 367          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSM7_ECTSI3.100e-19270.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS72_9PHAE6.850e-7566.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJH6_9STRA1.050e-4035.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CE38_9STRA3.860e-1832.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 548..552
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 327..378
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 573..703
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 525..547
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 406..424
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 447..524
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 306..326
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 379..405
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 553..572
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 425..446
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..305
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..30
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..29
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.552

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3184897..3191969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16703.1mRNA_C-linearis_contig9.16703.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3184492..3192104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16703.1 ID=prot_C-linearis_contig9.16703.1|Name=mRNA_C-linearis_contig9.16703.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=704bp
MPKARAAGAPRLHSSTPAVLVATALLLGCAVPPLPSARAVSAGGIPAPSS
ASLATLRRSEQHLSRRDEEQEGLQMPLTTAAAPCSRGSGRTNPSWFAART
TRGGGIFRRRRGGGGGNGGGGPASKAGEKREDGKEAGRDEKQGTKSEGFA
VAAGTTGGGGGGGDGSTSVDGQQGEGETTEGEDGGGSESGDEGEASGAEL
TDDDDQGGGSEDSRTGDASAKEETEAGDTDDGPVAEEEEESGEGEEGASA
KKAAAAAQGGERRRPVAPLFSFPPGPRVQRTEAEESLQEVLPMQQRLVKY
LTEDRIFGAQIMCSLYFFTSAVAYSVDSVKFRGCYQTALAALTLKQWGTV
LGRVRRVLVPHLLYEPQSRYVKYKARVSALALDPAVQGIVYCAIFMFMPL
GHALLPLLLKESVYLLWVVKEVLQIAAPGLVDMLSSLFEPLMIVFMTAGD
GEKWRSTPAGKKRLLLGRRLAQVCFKLEMMMPFSVALRVLPGAVQASLAA
GAGVAAAGGSAEQAGRAMGEETAKAVAAAAAAAAAAAAAGGAGGGVYGQI
ARALPLMKVGMLMLVYVKLLTVKNGQLEDDVRILKGLKVRGYNCEWLEQA
ADSVVFGKMVGCPWWAGLLASAFALLPNHEATKTVMASDDKLKTFGMTVL
NLAIGRTPGVEDDEDDESESNADSDGEEVSTVPKTGMAKIAKIAAIATGI
SDF*
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