prot_C-linearis_contig9.16700.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16700.1
Unique Nameprot_C-linearis_contig9.16700.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1271
Homology
BLAST of mRNA_C-linearis_contig9.16700.1 vs. uniprot
Match: A0A6H5KJQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ3_9PHAE)

HSP 1 Score: 662 bits (1708), Expect = 1.630e-212
Identity = 757/1361 (55.62%), Postives = 837/1361 (61.50%), Query Frame = 0
Query:    1 MAEPDAEALRKELTMVKDKAKAFIGRLNEEKTALAKELKEKSTVLAGXXXXXXXXXXXXXXXXXXXISALEDQVKDRDSRLLRAGELLQSELASKDRELGAALAEAKALKERAESAXXXXXXXXSDIPKANGSSTAGESVEXXXXXXXXXXXXXXXAKSLKGELQGVREALEASEASRPKAENLLAETKLASEAAACERVAAADGERDRACARAEALEASLAXXXXXXXXXXXXXXXXXXXLEDVKREAXXXXXXXXXXXXXXXXXXXXXEQAAMSTTNDLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAESSATELXXXXXXXXXXXXXXXXXXXXXXXXTPESALREEELRAQVASMESELGGLKEELSVARQEKEAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXAMNNEDKSGIEKPVEEGEGSGASTHPAIESTTDDAAAEAKAEAAALANRIAALEEGLEASKLALRQAEEAKEVAVASASSSAQEEIQTIQERLSTAEQETAELSQELAREKEAAXXXXXXXXA-----------------------------------------------------------------------------------------EAEEAQSAXXXXXXXXXXXXXXXXX----------------ELSSRLMGALEEREEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRQAKLDLASVLEESAAAGKKASEVKTMLEAAQAEHQETKMGLESEEAANAGLKAAVMEANETVAKRVDGLRDAIEKADKERDAAAADASSSKTQLQALQAQVASLLRENAGAKTEAGLRAGDLQQRLSAAQEELARERDAFAERKKEMQAYADAMAKEGEALRTATQGAQAVAARATAAEREASAAVAQIRQQGEAATATLTQALEERKMEANHAMSALEERNDALESETLRLQQLMTDETDEREEKAHGLAQSLASSVEEANIHKKKRLAARSEMISLAKTLEAERDGRKTVGHALQYGLVPKAIDQAAVLERVVMTAERSVHRLSKAGGVRLATNLQAAHASLARLRGRVAGADDPQVAWHHQQSSDLSRVALMGGAGSSSSMGIAGVGAEDASSSVISDRPDSPLGSAASGDQGGGPGSWRGTGRLGDQAARDSVHLERVRRLESEMERVSSGLALVLQSVEQLSELVEVQASLCGGLSVLCCTSRRTGGISSRGGRRTGGG-------PAYSTLEMGSRRLVEGGETD 1249
            MAEPDA ALRKEL MVKDKAKA+I +LNEEK ALAKEL++KS VLA XXXXXXXXXXXXXXXXXXX    EDQVKDRD RLLRA ELLQ++LA+KD EL AA AEAK L+++AESA XXX       P+AN  S   +S       XX         KSLKGELQ V EALEA EASR + E LLAETK A+         AA  ERD A ARAE L+ASL                          EAXXXXXXXXXXXXXXXXXXXXX     ST   L+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       AES A E+        XXXX              E+A REE LRAQV  ME+E+  L+EEL VA +EKE A A A                         +           V+  +G             D      K E  AL  R+AALEE L ASKLAL                   EE++ I+ RL  AEQETA+LS EL+  K   XXXXXXXX                                                                                          + E A+ AXXXXXXXXXXXXXXXXX                ELSSRLMGALEER    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX                                                ALRQAKLDLASVLE+S A G K SE ++                        GLK AV+E NETV+KRVD LRDAIEK + ERDAAAAD ++SKTQLQALQAQVASLL+ENAGAKTEAGLR GDLQQRL+AAQ+EL RE++A AERKKEMQAYA+AMA+EGE LRTAT+ AQA+AARATAAE E+ + VA +R++GEA  ++L QALE++  EA+ A++ALEERN ALESET RLQ LM  ET EREEKA GL QSL + +EEAN+HKKKRL ARS MISL KTLEAERDG K VGHALQY LVPKAIDQA VLERVVMTAE SVHRLS+AGGVRLATNLQAA +SLARLRGRVAGAD+P VAWH +QSSDLSRVALMGG+G +SSM   G G EDA+SSVISDR DSP GSAASGDQGGGPG WRG+ RLG+Q  +DS++LERVRRLESEMERVSSGLALV QSVEQLSELVEVQASLCGGLSVLCC+SR                       PAYSTLEMGSRRLVEGGE++
Sbjct:    1 MAEPDAAALRKELAMVKDKAKAYISKLNEEKAALAKELQDKSNVLAXXXXXXXXXXXXXXXXXXXXXXXXEDQVKDRDGRLLRAEELLQAKLAAKDEELQAAQAEAKTLRDQAESAAXXXGH----XPQANRGSXGADSPSEEAVAXXRAAAEEEM-KSLKGELQRVSEALEACEASRTETETLLAETKQAAAXXXXXXXXAAR-ERDDALARAETLQASL--------------------------EAXXXXXXXXXXXXXXXXXXXXXXXXX-STAEGLRAELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQESTIEELRSKL----------AESEAAEMEESGDKAEXXXXALSQAKAGRAEAESEAARREEALRAQVVGMEAEVASLREELRVAEEEKEIAAAAATAAEKDTDGTGSSAERSCAASGELPV---------AAVDSTDGXXXXXXXXXXXXXDT-----KEEVDALVGRVAALEEELAASKLALHXXXXXXXXXXXXXXXXX-EEMEAIRGRLRVAEQETADLSAELSSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATQAAKDQETAEEAXXXXXXXXXXXXXXXXXXRETEKALEDSDKQAEELSSRLMGALEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAVEAVKALEDALTQREQEAERLTEEVAGLRKETSLVKAELEARGE-ALRQAKLDLASVLEDSTATGAKLSEARSSXXXXXXXXXXXXXXXXXXXXXXXGLKXAVIETNETVSKRVDVLRDAIEKVEAERDAAAADVAASKTQLQALQAQVASLLKENAGAKTEAGLRVGDLQQRLAAAQDELGREKEAIAERKKEMQAYAEAMAREGETLRTATKEAQAIAARATAAESESKSIVALVRREGEATASSLRQALEKQAAEASRAVAALEERNAALESETSRLQHLMMTETGEREEKAQGLEQSLVTKIEEANLHKKKRLEARSMMISLDKTLEAERDGHKAVGHALQYKLVPKAIDQATVLERVVMTAELSVHRLSRAGGVRLATNLQAAQSSLARLRGRVAGADEPPVAWHQRQSSDLSRVALMGGSGGASSM--IGGGPEDANSSVISDRLDSPSGSAASGDQGGGPGFWRGSSRLGNQTPKDSIYLERVRRLESEMERVSSGLALVSQSVEQLSELVEVQASLCGGLSVLCCSSRXXXXXXXXXXXXXXXXXXXXXXXPAYSTLEMGSRRLVEGGESE 1300          
BLAST of mRNA_C-linearis_contig9.16700.1 vs. uniprot
Match: D8LSM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM5_ECTSI)

HSP 1 Score: 546 bits (1407), Expect = 1.530e-168
Identity = 684/1332 (51.35%), Postives = 753/1332 (56.53%), Query Frame = 0
Query:   15 MVKDKAKAFIGRLNEEKTALAKELKEKSTVLAGXXXXXXXXXXXXXXXXXXXISALEDQVKDRDSRLLRAGELLQSELASKDRELGAALAEAKALKERAESAXXXXXXXXSDIPKANGSSTAGESVEXXXXXXXXXXXXXXXAKSLKGELQGVREALEASEASRPKAENLLAETKLASEAAACERVAAADGERDRACARAEALEASL-AXXXXXXXXXXXXXXXXXXXLEDVKREAXXXXXXXXXXXXXXXXXXXXXEQAAMSTTND-------------------LQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAESSATELXXXXXXXXXXXXXXXXXXXXXXXXTPESALREEELRAQVASMESELGGLKEELSVARQEKEAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXAMNNEDKSGIEKPVEEGEGSGASTHPAIESTTDDAAAEAKAEAAALANRIAALEEGLEASKLALRQAEEAKEVAVASASSSAQEEIQTIQERLSTAEQETAELSQELAREKEAAXXXXXXXXAE---------------------------------------------------AEEAQSAXXXXXXXXXXXXXXXXX-------------------ELSSRLMGALEEREEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRQAKLDLASVLEESAAAGKKASEVKTMLEAAQAEHQETKMGLESEEAANAGLKAAVMEANETVAKRVDGLRDAIEKADKERDAAAADASSSKTQLQALQAQVASLLRENAGAKTEAGLRAGDLQQRLSAAQEELARERDAFAERKKEMQAYADAMAKEGEALRTATQGAQAVAARATAAEREASAAVAQIRQQGEAATATLTQALEERKMEANHAMSALEERNDALESETLRLQQLMTDETDEREEKAHGLAQSLASSVEEANIHKKKRLAARSEMISLAKTLEAERDGRKTVGHALQYGLVPKAIDQAAVLERVVMTAERSVHRLSKAGGVRLATNLQAAHASLARLRGRVAGADDPQVAWHHQQSSDLSRVALMGGAGSSSSMGIAGVGAEDASSSVISDRPDSPLGSAASGDQGGGPGSWRGTGRLGDQAARDSVHLERVRRLESEMERVSSGLALVLQSVEQLSELVEVQASLCGGLSVLCCTSRRTG---GISSRGGRRTGG----GPAYSTLEMGSRRLVEGGETD 1249
            MVKDKAK +I +LNEEK ALAKEL++KS VLAG XXXXXXXXXXXXXXXXXX     DQVKDRD RLLRA ELLQ++LA+KD EL AA AEAK L+++AESA           P+ANG S AG                    KSLKGELQ V EALEA EASR + E LLAETK A+E A   RV AA G RD A ARAE L+ASL AXXXXXXXXXXXXXXXXXXXLE+V+R +                     EQAA+    +                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXX          AES     XXXXXXXXXXXXXXXXXXXXXXXX  E+A REE LRAQVA ME E+  L+EEL VA +         XXXXXXXXXXXXXXXXXXXXXXXX                                                                       E A A      +EE++ I+ERL  AEQETA+LS EL+ EKE  XXXXXXXX                                                     A++ ++A XXXXXXXXXXXXXXXX                   ELSSRLMGALEEREE G                                                                                                            ALRQAKLDLASVL                                                                     RDAAAAD +SSKTQLQALQAQVASLL+ENAGAKTEAGLR GDLQQRL+AAQ+EL RER+A AERKKEMQAYA                   +AARATAAE E+ + VA +R+ GEAA ++L QALE++  EA+  ++ALEERN ALESETLRL+ LM  ET EREEKA GL QSL + +EEAN+HKKKRL ARS MISL KTLEAERDG K VGHALQY LVPKAIDQA VLERVVMTAE SVHRLS+AGGVRLATNLQAA +SLARLRGRVAGAD+P VAWH QQSSDLSRVALMGG+GS S  G+ G   EDASSSVISDR DSP GSAASGDQGGGPG WRG+ RLG+Q  +DS++LERVRRLESEMERVSSGLALV QSVEQLSELVEVQASLCGGLSVLCC+SRR G     ++ GGRR       GPAYSTLEMGSRRLVEGGE++
Sbjct:    1 MVKDKAKTYISKLNEEKAALAKELQDKSNVLAGVXXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQAKLAAKDEELQAAQAEAKTLRDQAESAAAVSGHD----PQANGGS-AGADSPSEEAVAAARAAAEEEIKSLKGELQRVSEALEACEASRTETETLLAETKQAAEEATG-RVTAAAGGRDDALARAETLQASLEAXXXXXXXXXXXXXXXXXXXLEEVRRGSASDLER---------------EQAAVRALEERLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEAAADASDAAXXXXXXXXXXXXXXXXXXSTIEELRSKLAESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAARREEALRAQVAGMEVEVASLREELRVAEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAATAGT----EEEMEAIRERLRVAEQETADLSAELSSEKEXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEATQAAKDQETAEXXXXXXXXXXXXXXXXXXARRETEKALEDSDKQAEELSSRLMGALEEREE-GRRREAAVAKEAGRLREELAGATGELERARAEVKGRDAAADESASVWASRVKELEEKMEAAEAGAVEAVKALEDALTQREQEAERLTEEAAGLRKETSLVKAELEARGEALRQAKLDLASVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDAAAADVASSKTQLQALQAQVASLLKENAGAKTEAGLRVGDLQQRLTAAQDELGREREAIAERKKEMQAYAXXXXXXXXXXXXXXXXXXXIAARATAAESESKSCVALVRRDGEAAASSLRQALEKQAAEASRTVAALEERNAALESETLRLRHLMMTETGEREEKAQGLEQSLVTKIEEANLHKKKRLEARSMMISLDKTLEAERDGHKAVGHALQYKLVPKAIDQATVLERVVMTAELSVHRLSRAGGVRLATNLQAAQSSLARLRGRVAGADEPPVAWHQQQSSDLSRVALMGGSGSGS--GMIGGAPEDASSSVISDRLDSPSGSAASGDQGGGPGFWRGSSRLGNQTPKDSIYLERVRRLESEMERVSSGLALVSQSVEQLSELVEVQASLCGGLSVLCCSSRRVGVGATATTSGGRRIRAXXXXGPAYSTLEMGSRRLVEGGESE 1304          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJQ3_9PHAE1.630e-21255.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSM5_ECTSI1.530e-16851.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..353
NoneNo IPR availableCOILSCoilCoilcoord: 926..960
NoneNo IPR availableCOILSCoilCoilcoord: 360..380
NoneNo IPR availableCOILSCoilCoilcoord: 92..123
NoneNo IPR availableCOILSCoilCoilcoord: 528..651
NoneNo IPR availableCOILSCoilCoilcoord: 752..839
NoneNo IPR availableCOILSCoilCoilcoord: 656..683
NoneNo IPR availableCOILSCoilCoilcoord: 207..280
NoneNo IPR availableCOILSCoilCoilcoord: 696..716
NoneNo IPR availableCOILSCoilCoilcoord: 143..177
NoneNo IPR availableCOILSCoilCoilcoord: 56..76
NoneNo IPR availableCOILSCoilCoilcoord: 390..424
NoneNo IPR availableCOILSCoilCoilcoord: 844..871
NoneNo IPR availableCOILSCoilCoilcoord: 485..519

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3085991..3102659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16700.1mRNA_C-linearis_contig9.16700.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3085837..3103652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16700.1 ID=prot_C-linearis_contig9.16700.1|Name=mRNA_C-linearis_contig9.16700.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1271bp
MAEPDAEALRKELTMVKDKAKAFIGRLNEEKTALAKELKEKSTVLAGVRD
KTKAYLEKLKKENDAAISALEDQVKDRDSRLLRAGELLQSELASKDRELG
AALAEAKALKERAESAAAAAAAAASDIPKANGSSTAGESVESAQAAAAAQ
AAAEAEAKSLKGELQGVREALEASEASRPKAENLLAETKLASEAAACERV
AAADGERDRACARAEALEASLAAAEAAAAAGERATEERAAELEDVKREAA
AAAEKEQAAVRSLEERLAQVEQAAMSTTNDLQARVAKSEAARNEAEMAAA
ESIAKGAAAATEAAEAEARSALAAAAAAHESALEELRSKLAESEAARETK
AESSATELELEAAAAAAAAAAAAKAQAQAESETPESALREEELRAQVASM
ESELGGLKEELSVARQEKEAAVAEAAAGAGVAAGAGVAAAAAAAAAAATA
MNNEDKSGIEKPVEEGEGSGASTHPAIESTTDDAAAEAKAEAAALANRIA
ALEEGLEASKLALRQAEEAKEVAVASASSSAQEEIQTIQERLSTAEQETA
ELSQELAREKEAAAAAAAAATAEAEEAQSAARGEAEKAQEQARKQAEELS
SRLMGALEEREEAGRRQAAAAKEVARLEGELAESNKELEQARAEVESRDA
AAEGSAGEWAKRVKEAEEKREAAEAGAVEAVRALEDALTEQREQGAERLK
EELGGLRKETSLVKAELEARGEALRQAKLDLASVLEESAAAGKKASEVKT
MLEAAQAEHQETKMGLESEEAANAGLKAAVMEANETVAKRVDGLRDAIEK
ADKERDAAAADASSSKTQLQALQAQVASLLRENAGAKTEAGLRAGDLQQR
LSAAQEELARERDAFAERKKEMQAYADAMAKEGEALRTATQGAQAVAARA
TAAEREASAAVAQIRQQGEAATATLTQALEERKMEANHAMSALEERNDAL
ESETLRLQQLMTDETDEREEKAHGLAQSLASSVEEANIHKKKRLAARSEM
ISLAKTLEAERDGRKTVGHALQYGLVPKAIDQAAVLERVVMTAERSVHRL
SKAGGVRLATNLQAAHASLARLRGRVAGADDPQVAWHHQQSSDLSRVALM
GGAGSSSSMGIAGVGAEDASSSVISDRPDSPLGSAASGDQGGGPGSWRGT
GRLGDQAARDSVHLERVRRLESEMERVSSGLALVLQSVEQLSELVEVQAS
LCGGLSVLCCTSRRTGGISSRGGRRTGGGPAYSTLEMGSRRLVEGGETDD
ARGQDLGGRRKKSSLASPLH*
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