prot_C-linearis_contig9.16693.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16693.1
Unique Nameprot_C-linearis_contig9.16693.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1108
Homology
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: D8LSM0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM0_ECTSI)

HSP 1 Score: 594 bits (1531), Expect = 1.840e-181
Identity = 414/738 (56.10%), Postives = 461/738 (62.47%), Query Frame = 0
Query:  110 MGVAGLTSYVNNNLRGAVAMEDLQEGDTLAIDGSGWMFQLLLGQRVDHGGDYDLLHKDIVREVARLRKAGLNLLVYMDGPTRKMKAATREKRRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYASIRTIGVKIVECSGEADQEVAKASAADDTGRTFAVGSDSDFFIFERCRYIHFDDLKSPQQKDDGSAGDGVAQARVWTRTRLAELCGISERQVVEWAILMGNDYTRELSFAPIGFGKHRNRKPEQTLEFVQQIGPDVRIDEIIAAKVARRLAACQGRG----------DGGVS--GEVGDXXXXXXXXXXXXXXXXXXXXXXXDGDDVEVADSLQDGSVLEQGE--GDYEXXXXXXXXXXXXXXXXASSPVADAEPAEGEERVASVEKPSRKAELARRRSEERVRAMEFSRALYALEPLDRFPDDVEMVEDDHDALAAAKADGR-AGGDVDDAPGGSDLAGRATAAGEXXXSSEGGDARAAGLAAGVEAAEANRSGWRQTGKEGGNRQSRRQRSKRAGKQTLGGGPKGFSEAGLLNSVAIGGGRKNLNL----NTQQRRRPRTRLDFVEAELQAELLKRPYGDAVFEALQRTVDEEEAVVAGEGGAGERGVGVPAGMPSTRSGGGVGGLSAGDKVWSRAAAGXXXXXXXXXXXXDWRVEGERVEAAARRTALWAVARGVREELPADVRVKWPDVLLSMRYQSNLLEMYREKEALDKSES 828
            MGVAGLT Y+N NLRGAVAMEDLQEGDTLAIDGSGWMF LL GQRVDHGGDYDLLHK +VREV RLR+AGL LLVYMDGPTRKMKAATRE+RR QDGE+ ANLY YTLDGGG+FVG G  PD S EAFPLPKLA+RQFYAS+RT GVKIVEC GEADQE+AKASA D TGRTFAVGSDSDF IFERCRY+HFDDL   ++++    G GVAQARVWTRTRLAELCGISERQVVEWAILMGNDYTRELSF  IGFG HR R+PE+TLE+VQ +GP V +DE I   V R+    +G G          + GV+  G   + XXXXXXXXXXXXXXXXXXXXXX               + E GE  G+ E                +   V  A+P   EE  A+ EK +           ER  AMEFSRA+YALEPLDRFPDD E+         AA  D R   G                    XXX                                                       KG      LN   IGG +K LNL    N  Q+++P TRLD VEAELQAELLKRPYGDAVFEAL+RT+++EEAVV   GGA E    +     S  SGGG   +  GDKVW+RA               D R+E ERVEAAARRTALWAVARG R+EL ADVRVKWPDVLLSMRYQ NLL MYRE+EA D  E+
Sbjct:    1 MGVAGLTGYINKNLRGAVAMEDLQEGDTLAIDGSGWMFHLLEGQRVDHGGDYDLLHKTVVREVGRLRQAGLKLLVYMDGPTRKMKAATRERRRGQDGEKLANLYAYTLDGGGSFVGPGQAPDLSAEAFPLPKLAQRQFYASLRTTGVKIVECPGEADQEIAKASAEDGTGRTFAVGSDSDFLIFERCRYVHFDDLVLHRREEGDGDGGGVAQARVWTRTRLAELCGISERQVVEWAILMGNDYTRELSFRVIGFGSHRRRRPEKTLEYVQSMGPGVTLDERIERTVRRKWRYGEGGGTSXXXXXAEDESGVADHGRANEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLDEDGEEWGEKERGEEEALEASSAVMVSSGVSVGAADPPAPEE--ATYEKAAWGVTFV-----ERATAMEFSRAMYALEPLDRFPDDAEVT-----GAGAADEDERLVAGLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGMGPDEFLNKAGIGGRKKGLNLRSAPNIHQQKKPLTRLDVVEAELQAELLKRPYGDAVFEALRRTLEQEEAVVV-RGGAAEGSGSLGTMTGSDNSGGGD--VVTGDKVWNRAPG-------VSDEEEDLRLEFERVEAAARRTALWAVARGHRKELAADVRVKWPDVLLSMRYQKNLLRMYREREAQDNHET 716          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A6H5KLV6_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV6_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 8.990e-42
Identity = 209/476 (43.91%), Postives = 234/476 (49.16%), Query Frame = 0
Query:  516 ERVRAMEFSRALYALEPLDRFPDDVEMVEDDHDALAAAKADGRAGGDVDDAPGGSDLAGRATAAGEXXXSSEGGDARAAGLAA---GVEAAEANRSGWRQTGKEGGNRQSRRQRSKRAGKQTLGGG--------------------------------------PKGFSEAGLLNSVAIGGGRKNLNL----NTQQRRRPRTRLDFVEAE-----------LQAELLKRPYGDAVFEALQRTVDEEEAVVAGEGGAGERGVGVPAGMPSTRSGGGVGGLSAGDKVWSRAAAGXXXXXXXXXXXXDWRVEGERVEAAARRTALWAVARGVREELPADVRVKWPDVLLSMRYQSNLLEMYREKEALDKSESXXXXXXXXXXXXXXXRTRQRLKAESAGNRPAGGFSTPSLAKKRGRKSGARERGAAXXXXXXXXXXXXXXXXXXXXXXXXXXAEFIMPRDHFHGPTFHALLHEYRAEN 935
            ER  AMEFSRA+YALEPLDRFPDD E  E D   + AAK  G    D D+                             GL A   G E A  + SG                    A   T G G                                       +G      LN V IG  +K LNL    N  Q+++P TRLD VEAE            +AELLKRPYGDAVFEAL+RT+++EEAVV   GGA E    +  G          G +  GD++W+RA               D R+E ERVEAAARRTALWAVARG R+EL  DVRVKWPDVLLSMRYQ NLL MYRE+EA+D  E+XXXXXXXXXXXXXXX                                        XXXXXXXXXXXXXXXXXXXXXX    AEFIMPRDHFHGPTFHALL+EYR EN
Sbjct:  126 ERATAMEFSRAMYALEPLDRFPDDPEHRETDR--MCAAKVTGTGAADEDE-----------------------------GLVAELGGREGAVVSPSGXXXXXXXXXXXXXXXXXGHAAAIGTRGDGGGDATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGMGPDDFLNKVGIGSRKKGLNLRLTQNIHQQKKPLTRLDVVEAEHGEPRRRGSPVAKAELLKRPYGDAVFEALRRTLEQEEAVVV-RGGAAEGSGSL--GTXXXXXXXXXGDVITGDRIWNRAPG-------VSDEEEDLRLEFERVEAAARRTALWAVARGHRKELADDVRVKWPDVLLSMRYQKNLLRMYREREAVDNHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSCSAEFIMPRDHFHGPTFHALLNEYREEN 555          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A7S3HTM6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTM6_9STRA)

HSP 1 Score: 156 bits (394), Expect = 3.310e-37
Identity = 101/271 (37.27%), Postives = 137/271 (50.55%), Query Frame = 0
Query:  111 GVAGLTSYVNNNLRGAVAMEDLQEGDTLAIDGSGWMFQLLLGQ---RVDHGGDYDLLHKDIVREVARLRKAGLNLLVYMDGPTRKMKAATREKRRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYASIRTIGVKIVECSGEADQEVAKA--------SAADDTGRTFAVGSDSDFFIFERCRYIHFDDLK---------SPQQKDDGSAGDGV--------AQARVWTRTRLAELCGISERQVVEWAILMGNDYT 353
            G+ GL +Y+   L G V    L    TL IDG GW+FQLL      R + GG Y+ L + I  EV RLR  GLNLLV  DGP +KMK+ TR  R     E++A  Y +  +          +     + FPLP L+++Q YA+++ +GV    CSGEADQE+AKA        +  ++T   FA G DSD+F  + C YI F  +          SPQ+         +        A ARVW R  + E  G+SE   + W +L+GNDYT
Sbjct:    1 GIRGLQNYLATKLDGVVLPTTLPVNATLVIDGDGWVFQLLETSHDFRPELGGCYNSLEESIAAEVTRLRSCGLNLLVLFDGPDQKMKSDTRAARATDHEEQWAKFYDFCEEN---------VKRTDNDTFPLPPLSQKQLYATLKKLGVACKSCSGEADQEIAKAVQFGNKDLAVGEETH--FAYGRDSDYFAMKDCPYIAFGGIALVENEALFTSPQRMRVTPTKASLLRQKPTHQAVARVWRRIEICEALGVSENTFLNWVVLIGNDYT 260          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A0L0H4V5_SPIPD (Uncharacterized protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0H4V5_SPIPD)

HSP 1 Score: 91.7 bits (226), Expect = 7.730e-15
Identity = 84/303 (27.72%), Postives = 120/303 (39.60%), Query Frame = 0
Query:  154 RVDHGGDYDLLHKDIVREVARLRKAGL--NLLVYMDGPTRKMKAATREKRRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYASIRTIG------------------------------------------VKIVECSGEADQEVAK-------------ASAADDTGRTFAVGSDSDFFIFERCRYIHFDDLKSPQQKD-DGSAG-------DGVAQARVWTRTRLAELCGISERQVVEWAILMGNDYTRELSFAPIGFGKHRNRKPEQTLEFVQQIGPDVRIDEII 391
            R ++GG Y      + REV  L+  G+  ++L Y DG   + K AT E+R  Q  +R++NLY Y       F G    P    E FP+P L   QF  ++  I                                           + IV+C  EAD E+A+                A   GR +  G DSD+F+   C YI F  +   Q  + DGS           V    VW R  +A +  ++E Q+VE  IL+GNDYT E S + +   K      E+  E   Q+ PD   ++ I
Sbjct:  143 RREYGGAYRAFDSFVRREVRYLQSLGVFESILFYFDGEMLQAKHATHEERVLQKEQRWSNLYRY-------FCGRTSTPPAQ-EVFPMPPLIFEQFLRTLEAITRENELEVDLADEFDRLTISQTAAGGTVEESVSPSSFACPTAKISIVQCKVEADIEIARDVELWNEQSSASSCGGASPPGRAYCYGEDSDYFLMRGCPYIRFGRISERQPFNADGSNAVLVSHQPHHVVALEVWRREEVAAMLSLTESQLVELGILIGNDYTMEYSRSDLKARKMHKNNTEEYAEVAVQV-PDEHSNDAI 436          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: K0RU78_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU78_THAOC)

HSP 1 Score: 80.5 bits (197), Expect = 1.880e-11
Identity = 71/246 (28.86%), Postives = 104/246 (42.28%), Query Frame = 0
Query:  176 RKAGLNLLVYMDGPTRKMKAATREKRRDQDGERFANLYGYTLDG-----------------------------------------GGAFVGVGVLPDR-SVEAFPLPKLARRQF---------YASIRTIG---VKIVECSGEADQEVAKASAADDTGRTFAVGSDSDFFIFE------------RCRYIHFDDLKSPQQKDDGSAGDGVAQARVWTRTRLAELCGISE-RQVVEWAILMGNDYTR 354
            R  G  +  Y+DGP ++MK+A R +R +Q  + + N+    ++G                                         GGA  G G   +  +++ FP   L+  Q          +A I   G   + IV C GEAD EVA+ASA D TG T+ VG+DSDF ++               RYI FD+L          +GD     +V TR    +L G+ + R ++E  IL+ NDYTR
Sbjct:  209 RSQGAGVGTYLDGPAQRMKSAERRRRSNQRQDEWENVRQLCVNGRLPGESRSSRYRSDARRQSREQNARDMSILPGRASASNGGSGGASNGEGESDELFNLQHFPFSPLSLEQVERSLFAFEEFAHILGAGPDSISIVHCEGEADVEVARASAEDHTGDTYLVGNDSDFLVYGFPDREESFINSGEVRYIPFDELDC--------SGDVAVARKVMTRRYACDLMGLPDSRSMIELGILLSNDYTR 446          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A023GLM3_AMBTT (XPGN domain-containing protein n=3 Tax=Amblyomma TaxID=6942 RepID=A0A023GLM3_AMBTT)

HSP 1 Score: 63.5 bits (153), Expect = 1.990e-6
Identity = 73/292 (25.00%), Postives = 122/292 (41.78%), Query Frame = 0
Query:  110 MGVAGLTSYVNNNLRGAVAMEDLQE-----GDTLAIDGSGWMFQLLLGQRVD--HGGDYDLLHKDIVREVARLRKAGLNLLVYMDG----PTRKMKAATREKRRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYASIRTIGVKIVECSGEADQEVAKASAADDTGRTFAVGSDSDFFIFERCR-YIHFDDLKSPQQK---DDGSAGDGVAQARVWTRTRLAELCGISERQVVEWAILMGNDYTR----ELSFAPIGFGKHRNRKPEQTLEFVQQIG 382
            MGV GL+S+   N        DL E        L IDG+  ++ +     ++  +GGDYD     I    A  +   + +++  DG      RK+K A R  +     ER A        G          P+  +    LP LA   F   +R +G+++++CS EAD+E+A   A  +         DSDF+IF     ++  D L +  Q    +DG   + ++         L    G  +  +  +A LMGND+      E  F+ I   + R++K + + +  + +G
Sbjct:    1 MGVHGLSSFFTLN-------PDLSEWKNLHSTKLVIDGNNLIYMIYFTSNLECIYGGDYDGYATAIRNYFAAFKACNIEVILVFDGGHDVSNRKLKTAQRRLQ-----ERLATAKAIAKTGA---------PNLKI----LPILAHEVFKDVVRELGIQVLQCSFEADEEIA---AIANYYECPVASQDSDFYIFNLVGGFVRLDSLSATPQTVTMEDGENVNTLSCRWYHVDNLLCHFPGFDKSLLPLFATLMGNDFVNGQMFEGFFSRIKLPRLRSKKLKISKQHTKMVG 264          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A7S4C453_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C453_CHRCT)

HSP 1 Score: 56.2 bits (134), Expect = 8.980e-6
Identity = 27/41 (65.85%), Postives = 31/41 (75.61%), Query Frame = 0
Query:  313 GSAGDGVAQARVWTRTRLAELCGISERQVVEWAILMGNDYT 353
            GS G  VA ARVW+R  LA L G+SE  VVEWA+L+GNDYT
Sbjct:   50 GSCGKLVAIARVWSRRLLASLSGLSEALVVEWALLVGNDYT 90          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A1A8UFP1_NOTFU (Asteroid homolog 1 n=7 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8UFP1_NOTFU)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-5
Identity = 72/256 (28.12%), Postives = 112/256 (43.75%), Query Frame = 0
Query:  110 MGVAGLTSYVNNNLRGAVAMEDLQEGDT-LAIDGSGWMFQLLLGQRVD--HGGDYDLLHKDIVREVARLRKAGLNLLVYMDG---PTRKMKAATREKRRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYASIRTIGVKIVECSGEADQEVAKASAADDTGRTFAVGSDSDFFIFER------CRYIHFDDLKSPQQKDDGSAGDGVAQARVWTRTRLAELCGISERQVVEW-AILMGNDY 352
            MGV GLT++V  N      ++DL+  D+ L IDG    ++L     +D  HGGDYD     + R ++ L    +   V +DG   P+ K     R   R Q   R A+   +  +G             SV    LP L R  F   +   GV +V+CS EAD E+A  +          + +DSDF++F+        +Y  + +L       +G A      +R +T   L    G  +R+++   A++ GNDY
Sbjct:    1 MGVQGLTTFVEGNRN---FLQDLRFRDSRLVIDGCSLYYRLYFHHGLDLQHGGDYDAFACLLTRFLSALAACKIQPYVVLDGGIDPSDKKFPTLRS--RLQSKIREADSLSHGRNG-------------SV----LPILTRHVFIHVLTQRGVPLVQCSAEADWEIACLARQ---WNCPVLTNDSDFYVFDLPGGYLPLQYFQWTNL-------NGKACQRYISSRFYTTNNLCRWFGGLDRELLHLCAVINGNDY 224          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A6A3F466_9STRA (XPGI domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3F466_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.850e-5
Identity = 71/270 (26.30%), Postives = 115/270 (42.59%), Query Frame = 0
Query:  110 MGVAGLTSYVNNNLRGAVA-MEDLQEGDTLAIDGSGWMFQLL--LGQRVDHGGDYDLL-------HKDIVREVARLRKAGLNLLVYMDGPT---------------RKMKAATREKRRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYASIRTIGVKIVECSGEADQEVAKASAADDTGRTFAV-GSDSDFFIFERCRYIHFDDLKSPQQKDDGSAGDGVAQARVWTRTRLAELCGISERQVVEWAILMGNDYT 353
            MGV GLT Y   +   A + + DL +  TLA+D  G+++ L   L Q       + LL        + +   + +LR   + L+   D P                R  +   + ++ D+       L   T D   A  GV     ++   FP    AR +    ++  G+ I     EAD+E+ +   A   GR +AV   DSDF      +YI F  L   +++D    G    +ARV++   +AE  G+   Q+V+ A++ GND+T
Sbjct:    1 MGVRGLTRYCQQHETAASSEVSDLHDV-TLAVDFVGFLYHLCDELFQASGASPSWLLLGGCPLRLERHVDAWLRQLRARNIRLVFVTDPPQCFGGESHRKGHCLQDRAQQKTAQIQQLDRTMTTVDTLEAATFDSRDAKPGVAKTLQQTNGRFPF---AREKLRGVLKKHGIGIQTARREADEELGELVRA---GRAYAVLAEDSDFLAMRGVKYIPFGSLTCYEEED----GQTKVRARVFSSDLVAESLGLDVEQLVDLALICGNDFT 259          
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Match: A0A3P8TDE7_AMPPE (XPG_I_2 domain-containing protein n=3 Tax=Pomacentridae TaxID=30863 RepID=A0A3P8TDE7_AMPPE)

HSP 1 Score: 60.5 bits (145), Expect = 1.890e-5
Identity = 71/256 (27.73%), Postives = 112/256 (43.75%), Query Frame = 0
Query:  110 MGVAGLTSYVNNNLRGAVAMEDLQEGDT-LAIDGSGWMFQLLLGQRVD--HGGDYDLLHKDIVREVARLRKAGLNLLVYMDG---PTRKMKAATREKRRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYASIRTIGVKIVECSGEADQEVAKASAADDTGRTFAVGSDSDFFIFER------CRYIHFDDLKSPQQKDDGSAGDGVAQARVWTRTRLAELCGISERQVVEW-AILMGNDY 352
            MGV GLT+YV  N       +D++  D+ L IDG    F+L      D  HGG+Y      + + ++ L    +   V +DG   P+ K     R++ + +  E  +  +G                + SV    LP L+R  F   +   GV +V+CS EAD E+A  +          + +DSDF+IF+        R+  + +L       +G A      AR +T + L  L G   R+++   A+L GNDY
Sbjct:    1 MGVQGLTTYVEGN---RYFFQDVKFRDSRLVIDGCSLYFRLYFNSGFDQQHGGEYSDFACLLSQFLSALAACNIQPYVVLDGGIDPSDKKFPTLRQRLQSKIKEADSISHGR---------------NGSV----LPILSRNVFIQVLIEKGVPLVQCSAEADWEIACLAHQ---WNCPVLTNDSDFYIFDLPGGYLPLRFFQWTNL-------NGKASHRYISARCYTTSSLCHLFGGMNRELLPLCAVLTGNDY 224          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LSM0_ECTSI1.840e-18156.10Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KLV6_9PHAE8.990e-4243.91Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S3HTM6_9STRA3.310e-3737.27Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A0L0H4V5_SPIPD7.730e-1527.72Uncharacterized protein n=1 Tax=Spizellomyces punc... [more]
K0RU78_THAOC1.880e-1128.86Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A023GLM3_AMBTT1.990e-625.00XPGN domain-containing protein n=3 Tax=Amblyomma T... [more]
A0A7S4C453_CHRCT8.980e-665.85Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
A0A1A8UFP1_NOTFU1.400e-528.13Asteroid homolog 1 n=7 Tax=Nothobranchius TaxID=28... [more]
A0A6A3F466_9STRA1.850e-526.30XPGI domain-containing protein n=1 Tax=Phytophthor... [more]
A0A3P8TDE7_AMPPE1.890e-527.73XPG_I_2 domain-containing protein n=3 Tax=Pomacent... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 928..959
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..1107
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.454
IPR006084XPG/Rad2 endonucleasePRINTSPR00853XPGRADSUPERcoord: 182..201
score: 27.34
coord: 341..356
score: 36.72
coord: 251..268
score: 23.44
coord: 135..149
score: 38.33
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 110..208
e-value: 0.0023
score: 14.7
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 110..204
e-value: 2.9E-6
score: 27.7
IPR026832AsteroidPANTHERPTHR15665ASTEROID PROTEINcoord: 110..361
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 110..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:3027863..3035541 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16693.1mRNA_C-linearis_contig9.16693.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 3027825..3035926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16693.1 ID=prot_C-linearis_contig9.16693.1|Name=mRNA_C-linearis_contig9.16693.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1108bp
MGRKKRPRPIARLSHLVCCWAAVARDAGEANQHGRSRSSAAAPAFAVNAG
ATAGGAVRLRLGSTSTIGSRGSLARRPHLGSPLLRQQRQLESQRLLRRGR
DGVSTGQCLMGVAGLTSYVNNNLRGAVAMEDLQEGDTLAIDGSGWMFQLL
LGQRVDHGGDYDLLHKDIVREVARLRKAGLNLLVYMDGPTRKMKAATREK
RRDQDGERFANLYGYTLDGGGAFVGVGVLPDRSVEAFPLPKLARRQFYAS
IRTIGVKIVECSGEADQEVAKASAADDTGRTFAVGSDSDFFIFERCRYIH
FDDLKSPQQKDDGSAGDGVAQARVWTRTRLAELCGISERQVVEWAILMGN
DYTRELSFAPIGFGKHRNRKPEQTLEFVQQIGPDVRIDEIIAAKVARRLA
ACQGRGDGGVSGEVGDDEDDEEGRGEEGGEEEEEEEEEEDGDDVEVADSL
QDGSVLEQGEGDYEDEEAEKEGEQDGEVLEASSPVADAEPAEGEERVASV
EKPSRKAELARRRSEERVRAMEFSRALYALEPLDRFPDDVEMVEDDHDAL
AAAKADGRAGGDVDDAPGGSDLAGRATAAGEASASSEGGDARAAGLAAGV
EAAEANRSGWRQTGKEGGNRQSRRQRSKRAGKQTLGGGPKGFSEAGLLNS
VAIGGGRKNLNLNTQQRRRPRTRLDFVEAELQAELLKRPYGDAVFEALQR
TVDEEEAVVAGEGGAGERGVGVPAGMPSTRSGGGVGGLSAGDKVWSRAAA
GSGGGGSGSEEEEDWRVEGERVEAAARRTALWAVARGVREELPADVRVKW
PDVLLSMRYQSNLLEMYREKEALDKSESNSSSSSSSSTKVSLARTRQRLK
AESAGNRPAGGFSTPSLAKKRGRKSGARERGAAGGGERRRSSRSSPSSPS
SFSSSSSAAAEFIMPRDHFHGPTFHALLHEYRAENSAAAKRLREEKQAEE
EAAAAAAGAALEHNKGKTGEEEEEEEEDGDATSRASTADENGGISTAGGS
VVGVKGVAGGVQTGKNKNAKRRGGVSPPPPSSRMPESTPATSTTAGGAGT
PVRRVPGAIPVAIPQPAQQQQQQQQQRMKRQLRPRQHRRSPRWLCLSTPT
VTRSWSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006084XPG/Rad2
IPR006085XPG_DNA_repair_N
IPR026832Asteroid
IPR029060PIN-like_dom_sf