prot_C-linearis_contig9.16673.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16673.1
Unique Nameprot_C-linearis_contig9.16673.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length239
Homology
BLAST of mRNA_C-linearis_contig9.16673.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.640e-33
Identity = 91/214 (42.52%), Postives = 125/214 (58.41%), Query Frame = 0
Query:   22 TALQSAAAVGSPELVELLLSKSSPASWNHADKAGSTALFYAALEGNLLEAKLLLSAGVTQPTSSPSGVECPLAAAAQGGHAAIVRLLLEDR-MRLIGGTRKLPKAIFSAVSF--SRASVLQMLVSAGGEEQLAHWAGLSYDSRPMLNWASTVAHLPTISVLLADGAREDARDSRGRLAFDVIGSDNSVVADMDPFKRAAARRMLQRGPAFRAKS 232
            TAL  AAA     L+++LL K+ P + N A   G T L+ AA+ G       LLSAG  QP +S     CPL AA +  H  +VR+LL DR M+ IGG   +P+A+ +A S    RAS+++ML+SA G E+  HWA   Y   P+L+ A +  ++    VLLA GA E A +  GR A +V+G  N+     DP K+ A  RML+RGPA+RA+S
Sbjct:  264 TALGFAAARDQTNLIDILLQKA-PTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGF-NAPSLQRDPAKKGAIVRMLERGPAYRARS 475          
BLAST of mRNA_C-linearis_contig9.16673.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 4.100e-32
Identity = 90/214 (42.06%), Postives = 123/214 (57.48%), Query Frame = 0
Query:   22 TALQSAAAVGSPELVELLLSKSSPASWNHADKAGSTALFYAALEGNLLEAKLLLSAGVTQPTSSPSGVECPLAAAAQGGHAAIVRLLLEDR-MRLIGGTRKLPKAIFSAVSF--SRASVLQMLVSAGGEEQLAHWAGLSYDSRPMLNWASTVAHLPTISVLLADGAREDARDSRGRLAFDVIGSDNSVVADMDPFKRAAARRMLQRGPAFRAKS 232
            TAL  AAA    +L+++LL K+ P + N A   G T L+ AA+ G       LLSAG  QP +S     CPL AA +  H  +VR+LL DR M  I G   +P+A+ +A S    RAS+++ML+SA G E+  HWA   Y   P+L+ A +  ++    VLLA GA E A +  GR A +V+G  N+     DP K+ A  RML RGPA+RA+S
Sbjct:  272 TALGFAAARDQTDLIDILLQKA-PTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGF-NAPSLQRDPAKKGAIVRMLARGPAYRARS 483          
BLAST of mRNA_C-linearis_contig9.16673.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 7.940e-27
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 0
Query:    1 MARELLEAGADPVAADRRTSG-TALQSAAAVGSPELVELLLSKSSPASWNHADKAGSTALFYAALEGNLLEAKLLLSAGVTQPTSSPSGVECPLAA---AAQGGHAAIVRLLLEDRMRLIGGTRKLPKAIFSAVSFSRASVLQMLVSAGGEEQLAHWAGLSYDSRPMLNWASTVAHLPTISVLLADGAREDARDSRGRLAFDVIGSDNSVVADMDPFKRAAARRMLQRGPAFRAKSLG 234
            +AREL + GA P    +   G +A+  AA +G+ E++ ++L+ + P++ N  D  G T +  AAL G       LLSAG     +S  GV+   AA   A  GGH  +VR++LE  +  +GG   +P +I  AV   +A +L+MLVSA GEE    WA         L+ A+    +  I VLL+ GARE   +  G+LA + +G      A   P K AA  RMLQRGPA+RA+S G
Sbjct:  124 LARELFKVGASPFV--KNADGMSAMHVAAGLGNLEVMTVILTNT-PSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAG-----ASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYG 353          
BLAST of mRNA_C-linearis_contig9.16673.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 3.800e-25
Identity = 88/238 (36.97%), Postives = 127/238 (53.36%), Query Frame = 0
Query:    1 MARELLEAGADPVAADRRTSG-TALQSAAAVGSPELVELLLSKSSPASWNHADKAGSTALFYAALEGNLLEAKLLLSAGVTQPTSSPSGVECPLAA---AAQGGHAAIVRLLLEDRMRLIGGTRKLPKAIFSAVSFSRASVLQMLVSAGGEEQLAHWAGLSYDSRPMLNWASTVAHLPTISVLLADGAREDARDSRGRLAFDVIGSDNSVVADMDPFKRAAARRMLQRGPAFRAKSLG 234
            +AREL + GA P    +   G +A+  AA +G+ E++ ++L+ + P+  N  D  G T +  AAL G       LLSAG     +S  GV+   AA   A  GGH  +VR++LE  +  +GG   +P +I  AV   +A +L+MLVSA GE+    WA         L+ A+    +  + VLL+ GARE   +  G+LA + +G      A   P K AA  RMLQRGPA+RA+S G
Sbjct:  179 LARELFKVGASPFV--KNADGMSAMHVAAGLGNLEVMTVILTNT-PSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAG-----ASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYG 408          
BLAST of mRNA_C-linearis_contig9.16673.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 7.450e-20
Identity = 79/220 (35.91%), Postives = 121/220 (55.00%), Query Frame = 0
Query:   22 TALQSAAAVGSPELVELLLSKSSPASWNHADKAGSTALFYAALEGNLLEAKLLLSAGVTQ-PTSSPSGVECPLAAAAQGGHAAIVRLLLEDRMRLIGGTRKLPKAIFSAVSFSRASVLQMLVSAGGEEQLAHWAGLSY-DSRPMLNWASTVAHLPTISVLLADGAREDARDSRGRLAFDVIGSDNSVVADM-DPFKRAAARRMLQRGPAFRAKSLGMAWV 238
            TAL  AA   +P+L+ LLLS++ P++ N  +K G TAL YAA EG  +    LLSAG    P+   +G+   L  A + GH  +VR+LL+  ++ +GG   +  A+  ++      +LQML+   GE++   WA L + D  P L+ A+    L   S+LL  GA E   +   + A   +G+  ++ A+  +P   AA  R+L+RGPAFRA+S   AW 
Sbjct:  161 TALHVAATFNAPDLLGLLLSRA-PSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGS-LLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGA--ALPANKKNPDTSAAVCRLLERGPAFRARS--WAWA 374          
BLAST of mRNA_C-linearis_contig9.16673.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 1.330e-19
Identity = 87/241 (36.10%), Postives = 125/241 (51.87%), Query Frame = 0
Query:    1 MARELLEAGADPVAADRRTSGTALQSAAAVGSPELVELLL----SKSSPASWNHADKAGSTALFYAALEGNLLEAKL-LLSAGVTQPTSSPSGVECPLAAAAQGGHAAIVRLLLEDRMRLIGGT-RKLPKAIFSAVSFSRASVLQMLVSAG-GEEQLAHWAGLSYDSRPMLNWASTVAHLPTISVLLADGAREDARDSRGRLAFDVIGSDNSVVADMDPFK--RAAARRMLQRGPAFRAKS 232
            MA+ LL+AGADP+  DR     AL  AAA G+P +++LLL    S  S    +H  +   T L  +ALE N ++A   LLS G  + T    G    L  A       IVR+L E  +  +GG  R +P ++ SA    R  +L++L++ G G+    +WA       P+LN A+  A +  + VLLA GA E   D   + A D+IG   +  +    F+  +AA RR L RGPA+RA+S
Sbjct:  132 MAKALLDAGADPLIEDREGQ-VALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPL-QSALESNQVQAVAHLLSLGA-RATVDREGRGNLLRRAVVKNSEPIVRVLFEAGLESVGGAARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYVWGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDLLASGSKSASFRSDKAAIRRTLLRGPAYRARS 369          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LSK8_ECTSI1.640e-3342.52Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JSC7_9PHAE4.100e-3242.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK53_9PHAE7.940e-2737.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4M4_ECTSI3.800e-2536.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDZ2_ECTSI7.450e-2035.91Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5L2Q3_9PHAE1.330e-1936.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 3..78
e-value: 2.3E-7
score: 31.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..191
score: 25.753
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..210
e-value: 1.4E-28
score: 101.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..199
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 2..82
coord: 44..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:2681488..2682204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16673.1mRNA_C-linearis_contig9.16673.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 2679129..2683578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16673.1 ID=prot_C-linearis_contig9.16673.1|Name=mRNA_C-linearis_contig9.16673.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=239bp
MARELLEAGADPVAADRRTSGTALQSAAAVGSPELVELLLSKSSPASWNH
ADKAGSTALFYAALEGNLLEAKLLLSAGVTQPTSSPSGVECPLAAAAQGG
HAAIVRLLLEDRMRLIGGTRKLPKAIFSAVSFSRASVLQMLVSAGGEEQL
AHWAGLSYDSRPMLNWASTVAHLPTISVLLADGAREDARDSRGRLAFDVI
GSDNSVVADMDPFKRAAARRMLQRGPAFRAKSLGMAWV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf