prot_C-linearis_contig9.16601.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16601.1
Unique Nameprot_C-linearis_contig9.16601.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length108
Homology
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BLAST of mRNA_C-linearis_contig9.16601.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 9.450e-6
Identity = 29/70 (41.43%), Postives = 38/70 (54.29%), Query Frame = 0 
Query:   14 YPERASPEGPVDEIFKLVCRGATDEQWAEWLRVPLGACRRRWQHRPLQRADRSWGGRECGMEGLRRPYLV 83
            +PER S +G   E+FKLV  GA+ EQWAEWLRVPL     R     ++R  ++      G  G R   L+
Sbjct:    4 FPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLL 73
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNQ1_9PHAE9.450e-641.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1761835..1762158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16601.1mRNA_C-linearis_contig9.16601.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1756891..1762193 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16601.1 ID=prot_C-linearis_contig9.16601.1|Name=mRNA_C-linearis_contig9.16601.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=108bp
MSDNDYSDMSDTDYPERASPEGPVDEIFKLVCRGATDEQWAEWLRVPLGA
CRRRWQHRPLQRADRSWGGRECGMEGLRRPYLVASGCWRWKRGDESLACL
MQVLSRT*
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