prot_C-linearis_contig9.16600.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16600.1
Unique Nameprot_C-linearis_contig9.16600.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length468
Homology
BLAST of mRNA_C-linearis_contig9.16600.1 vs. uniprot
Match: D8LSK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK9_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 3.670e-156
Identity = 319/473 (67.44%), Postives = 350/473 (74.00%), Query Frame = 0
Query:    7 GDYAWKSCQELGSGPDEEKAIAESIRAKTLEFEREREAYIDAAKQLLAPXXXXXXXXXXXXXXXXXXXX---------GENAGHHQQRQQD---------RHGLRRSRPRGGVALS-RSTSLREAREEGRLASEELRTLQHRKADAKVRLQAERLSNLEHGLELGVLRLERLLDRERILELLRLTDPNRAAATRAVELAKATG-------------------RGGEGGGGDGRKEEVAEELIGQLEDRVAEAEERVRVEASRVGAAVAGRLEERARREGDSRREESLARDEIVRLQTTLRDKEERLATTVVSYLELRHAMLRAQRVASEAREDAVTGRVADEEKMKNCRSYTAERTRAIREQVNSGCEDVGGELRRQIQLRQDEACMLQEQRAEAEELYEARAVRLESLLEEWKTKHAALRRRFSLETEGFRRDADNIGRRFEKIRAGPPGGRPPISSRSGSSARHAVERAIY 441
            GD+AW+S +ELG G D +K +AESIRAKTLEFEREREAYIDAAKQLL  XXXXXXXXXXXXXXXXXXXX         GE       R+ D         R  L+  RP  G   + +++S+REAREE RLASEE+RTL +RK+DAKVRLQAERLSNLEHGLELGVLRLERLLDRERILELLRLTDP+RA  TRA  +   +G                                EV+EE++ QLE+RVAEAEERVRVEASRVGAAVA RLEERARR                RLQT LR KEERLA TVVSYLELRHAMLRAQRVASEAREDA  GR ADEE+M+ CRSYTA + +AI E+V   CEDV  EL RQ+QLR+DE CML+EQRAEAEELYEARAVRLESLLEEWK KHAALRRRFSLETEGFRRDADNIGRRFE+IRAGPPGGRP ISSRSGSSAR AVERA Y
Sbjct:    6 GDFAWESVEELGVGLDAQKTLAESIRAKTLEFEREREAYIDAAKQLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGEVEEGRGVRRLDNTPGGNADGRRRLQLRRPWSGRGTAPKASSVREAREEQRLASEEIRTLHNRKSDAKVRLQAERLSNLEHGLELGVLRLERLLDRERILELLRLTDPDRAETTRAAGMEAFSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVSEEVVEQLEERVAEAEERVRVEASRVGAAVAVRLEERARRXXXXXXXXXXXXXXXXRLQTALRGKEERLANTVVSYLELRHAMLRAQRVASEAREDAKKGRAADEEEMRKCRSYTAYQVQAITERVKGTCEDVESELHRQVQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISSRSGSSARLAVERAFY 478          
BLAST of mRNA_C-linearis_contig9.16600.1 vs. uniprot
Match: A0A6H5K077_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K077_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 6.120e-67
Identity = 131/188 (69.68%), Postives = 141/188 (75.00%), Query Frame = 0
Query:  281 YLELRHAMLRAQRVASEAREDAVTGRVADEEKMK---------------------------NCRSYTAERTRAIREQVNSGCEDVGGELRRQIQLRQDEACMLQEQRAEAEELYEARAVRLESLLEEWKTKHAALRRRFSLETEGFRRDADNIGRRFEKIRAGPPGGRPPISSRSGSSARHAVERAIY 441
            + ELRHAMLRAQRVASEAREDA  GR ADEE++K                            CRSY A + +AI E+V   CEDV  EL RQIQLR+DE CML+EQRAEAEELYEARAVRLESLLEEWK KHAALRRRFSLETEGFRRDADNIGRRFE+IRAGPPGGRP ISSRSGSSAR AVERA +
Sbjct:   43 FQELRHAMLRAQRVASEAREDAKKGRAADEEELKPLLSSCLRSDGALLPPFALHADTCQMRKCRSYMAYQVQAITERVKGTCEDVESELHRQIQLRKDEVCMLREQRAEAEELYEARAVRLESLLEEWKGKHAALRRRFSLETEGFRRDADNIGRRFERIRAGPPGGRPAISSRSGSSARLAVERAFH 230          
BLAST of mRNA_C-linearis_contig9.16600.1 vs. uniprot
Match: A0A6H5JSM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM9_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 1.530e-22
Identity = 97/161 (60.25%), Postives = 113/161 (70.19%), Query Frame = 0
Query:    7 GDYAWKSCQELGSGPDEEKAIAESIRAKTLEFEREREAYIDAAKQLLAPXXXXXXXXXXXXXXXXXXXXGE----------NAGHHQQRQQDRHG--------LRRSRPRGGV-ALSRSTSLREAREEGRLASEELRTLQHRKADAKVRLQAERLSNLEHG 148
            GD+AW+S +ELG G D +K +AESIRAKTLEFE EREAYIDAAKQLL  XXXXXXXXXXXXXXXXXXXX              G   +R  D  G        L+  RPR G  A  +++S+REAREE RLASEE+RTLQ+RK+DAKVRLQAERL + + G
Sbjct:    6 GDFAWESVEELGVGLDAQKTLAESIRAKTLEFESEREAYIDAAKQLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEGRGVRRLADTPGGNADGRRRLQLRRPRSGRGAAPKASSVREAREEQRLASEEIRTLQNRKSDAKVRLQAERLRSSQTG 166          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSK9_ECTSI3.670e-15667.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K077_9PHAE6.120e-6769.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSM9_9PHAE1.530e-2260.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..230
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableCOILSCoilCoilcoord: 364..391

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1749694..1756434 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16600.1mRNA_C-linearis_contig9.16600.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1749466..1756944 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16600.1 ID=prot_C-linearis_contig9.16600.1|Name=mRNA_C-linearis_contig9.16600.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=468bp
MERQDRGDYAWKSCQELGSGPDEEKAIAESIRAKTLEFEREREAYIDAAK
QLLAPPPPPPPPPPRPATEAPAAATGENAGHHQQRQQDRHGLRRSRPRGG
VALSRSTSLREAREEGRLASEELRTLQHRKADAKVRLQAERLSNLEHGLE
LGVLRLERLLDRERILELLRLTDPNRAAATRAVELAKATGRGGEGGGGDG
RKEEVAEELIGQLEDRVAEAEERVRVEASRVGAAVAGRLEERARREGDSR
REESLARDEIVRLQTTLRDKEERLATTVVSYLELRHAMLRAQRVASEARE
DAVTGRVADEEKMKNCRSYTAERTRAIREQVNSGCEDVGGELRRQIQLRQ
DEACMLQEQRAEAEELYEARAVRLESLLEEWKTKHAALRRRFSLETEGFR
RDADNIGRRFEKIRAGPPGGRPPISSRSGSSARHAVERAIYSGGGRRAAA
VAAAGGGGGEALERAYR*
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