prot_C-linearis_contig9.16598.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16598.1
Unique Nameprot_C-linearis_contig9.16598.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length725
Homology
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: D8LSJ8_ECTSI (Myb-like DNA-binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ8_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.320e-105
Identity = 201/319 (63.01%), Postives = 214/319 (67.08%), Query Frame = 0 
Query:    1 MSLAASNGILRTDAIGGGEPATLLWSEPTRTYHRSGPGYT-DPTMCIRNVRAGAEAGNNNKRPTYETTDDKQQQALLYRQHRARVEDDEYDGGRESKLRRLTPPYQANEQQQPGESAPAPWASQRQHLQQPHYQQDHQLMEDTEPLAGGAQENPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKA 318
            MSL  S+ ILR  + GG  PA  +WSE +R Y    P  T    MC+R   AGA      KR  Y+T                + E  E    ++   R+L P  +A                                       AGG  +NPRLKRNKPVKWSAEEDRRLR+AVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLV LV KGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKA
Sbjct:    1 MSLETSSRILRAVSPGGVSPA--VWSEFSRGYQALSPDETRSSNMCVR---AGATMST--KRQGYQT----------------KTEATEPQPTQQQLFRQLGPSIEA--------------------------------------AAGGGLDNPRLKRNKPVKWSAEEDRRLRDAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVGLVEKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKA 258
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.780e-66
Identity = 109/155 (70.32%), Postives = 129/155 (83.23%), Query Frame = 0 
Query:  160 PVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDA 314
            P KW+  ED  LR AV ++ E+ WKDIA  V TRNHVQCLQRWKKVLKPGLVKGQWSA ED +LV+LV KGF+NWGQ+A+ M GRTSKQCRERW HHLDP+V+KG YTTEED  I+ LQ E+GN+W++IAK L GRTENAVKIRWKAL+R +++A
Sbjct:   27 PRKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNA 181
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 5.520e-59
Identity = 98/150 (65.33%), Postives = 120/150 (80.00%), Query Frame = 0 
Query:  160 PVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNR 309
            P +WS EED RLR AV R+    WK+IA+ V+TRNHVQCLQRWKKVL PGLVKGQW+ EED  LV +VN+G +NWG +++ + GRTSKQCRERWCHHLDP + KGG+T EED++I+ LQ ++GN+WA IA+ L GRTENA KIRWK L R
Sbjct:   68 PRRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILER 217
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: D7FQG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG8_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 2.440e-57
Identity = 100/155 (64.52%), Postives = 122/155 (78.71%), Query Frame = 0 
Query:  155 LKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNR 309
            L+R  P +WS EED RLR AV R+    WK+IA+ V+TRNHVQCLQRWKKVL PGLVKGQW+ EED  LV +VN+G +NWG +++ + GRTSKQCRERWCHHLDP + KGG+T  ED++II LQ ++GN+WA IA+ L GRTENA KIRWK L R
Sbjct:   12 LRRPHPRRWSLEEDERLRAAVERYHGTNWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDQLLVSIVNEGHKNWGSLSARIPGRTSKQCRERWCHHLDPRIVKGGWTEAEDQMIILLQQQMGNKWAQIAQHLDGRTENATKIRWKILER 166
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: D8LM16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM16_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 7.040e-56
Identity = 94/152 (61.84%), Postives = 113/152 (74.34%), Query Frame = 0 
Query:  159 KPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRR 310
            +P +W   ED++L  AV    E  WK IA  V +RNHVQCLQRWKKVL+PGLVKGQW AEED  L++L    F+NWG ++  M GRTSKQCRERWCHHLDP++ KG YT EED +II  Q E+GNRW+ IA RL GRTEN++KIR KAL R+
Sbjct:  105 RPRRWQPAEDKKLTLAVKESGEKDWKSIALKVGSRNHVQCLQRWKKVLRPGLVKGQWDAEEDAALMKLATAPFKNWGVLSQSMSGRTSKQCRERWCHHLDPSINKGAYTEEEDNIIIETQAELGNRWSQIAARLPGRTENSIKIRCKALQRK 256
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA)

HSP 1 Score: 207 bits (526), Expect = 5.700e-55
Identity = 101/169 (59.76%), Postives = 124/169 (73.37%), Query Frame = 0 
Query:  147 GGAQENPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDAR 315
            GG + NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L  LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED+LI+ +Q ++GNRW+ IA++L+GRTE+AVKIRWK+L R +R +R
Sbjct:  102 GGDKSNPR-------RWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSR 263
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 194 bits (493), Expect = 1.510e-54
Identity = 92/150 (61.33%), Postives = 111/150 (74.00%), Query Frame = 0 
Query:  160 PVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNR 309
            P +W+ EED +LREAV R  E  WK IA  V  RNH QCLQRW KVL PGLVKG W  +EDD L ELV +G +NWGQVA+ + GRTSKQCRERW +HLDP++ +G Y+ EED +I+  Q  +GNRW+ IA  L GRTE+AVKIRWK+L R
Sbjct:    9 PKRWTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCR 158
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.340e-54
Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 0 
Query:  147 GGAQENPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQR 312
            GG + NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L  LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED+LII +Q ++GNRW+ IA++LTGRTE+AVKIRWK+L R +R
Sbjct:   91 GGDKSNPR-------RWSKAEDESLRLAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTKR 249
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: W4GZ24_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZ24_9STRA)

HSP 1 Score: 206 bits (525), Expect = 6.610e-54
Identity = 101/172 (58.72%), Postives = 125/172 (72.67%), Query Frame = 0 
Query:  147 GGAQENPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDARNKA 318
            GG + NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L  LV +G +NWGQVA  + GRTSKQCRERWC+HLDP + KG YT EED++I+ +Q ++GNRW+ IA++LTGRTE+AVKIRWK+L R +R +R+ A
Sbjct:  103 GGDKSNPR-------RWSKAEDESLRVAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVAGQIPGRTSKQCRERWCNHLDPNINKGNYTREEDQVIVDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTRRSSRDNA 267
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BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Match: A0A024UM09_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM09_9STRA)

HSP 1 Score: 206 bits (525), Expect = 9.800e-54
Identity = 101/169 (59.76%), Postives = 124/169 (73.37%), Query Frame = 0 
Query:  147 GGAQENPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQRWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCRERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAVKIRWKALNRRQRDAR 315
            GG + NPR       +WS  ED  LR AV R  E  WK IA  V  RNH QCLQRW KVLKPGL+KG W+ EED +L  LV +G +NWGQVAS + GRTSKQCRERWC+HLDP + KG YT EED+LI+ +Q ++GNRW+ IA++L+GRTE+AVKIRWK+L R +R +R
Sbjct:  102 GGDKSNPR-------RWSKVEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSSR 263
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSJ8_ECTSI1.320e-10563.01Myb-like DNA-binding protein, putative n=2 Tax=Ect... [more]
A0A7S2UU49_9STRA2.780e-6670.32Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6H5K458_9PHAE5.520e-5965.33MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FQG8_ECTSI2.440e-5764.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LM16_ECTSI7.040e-5661.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A418B0H6_9STRA5.700e-5559.76Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
H3G911_PHYRM1.510e-5461.33Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6G0XBC5_9STRA3.340e-5461.45Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GZ24_9STRA6.610e-5458.72Uncharacterized protein n=12 Tax=Aphanomyces astac... [more]
A0A024UM09_9STRA9.800e-5459.76Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 262..310
e-value: 2.0E-9
score: 47.3
coord: 211..259
e-value: 1.1E-11
score: 54.8
coord: 159..208
e-value: 9.0E-11
score: 51.8
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 161..206
e-value: 6.9E-9
score: 35.8
NoneNo IPR availablePFAMPF13921Myb_DNA-bind_6coord: 215..273
e-value: 2.5E-13
score: 50.0
NoneNo IPR availableGENE3D1.10.10.60coord: 161..210
e-value: 9.5E-15
score: 56.4
NoneNo IPR availableGENE3D1.10.10.60coord: 211..263
e-value: 1.0E-19
score: 72.1
NoneNo IPR availableGENE3D1.10.10.60coord: 266..326
e-value: 7.0E-13
score: 50.2
NoneNo IPR availablePANTHERPTHR45614:SF29coord: 141..226
NoneNo IPR availablePANTHERPTHR45614:SF29coord: 211..344
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 211..344
IPR015495Myb-like transcription factorPANTHERPTHR45614FAMILY NOT NAMEDcoord: 141..226
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 152..206
score: 13.301
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 262..312
score: 13.969
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 207..261
score: 22.116
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 209..304
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 162..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1735262..1740168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16598.1mRNA_C-linearis_contig9.16598.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1734811..1740290 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16598.1 ID=prot_C-linearis_contig9.16598.1|Name=mRNA_C-linearis_contig9.16598.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=725bp
MSLAASNGILRTDAIGGGEPATLLWSEPTRTYHRSGPGYTDPTMCIRNVR
AGAEAGNNNKRPTYETTDDKQQQALLYRQHRARVEDDEYDGGRESKLRRL
TPPYQANEQQQPGESAPAPWASQRQHLQQPHYQQDHQLMEDTEPLAGGAQ
ENPRLKRNKPVKWSAEEDRRLREAVVRFSEARWKDIASLVETRNHVQCLQ
RWKKVLKPGLVKGQWSAEEDDRLVELVNKGFRNWGQVASFMDGRTSKQCR
ERWCHHLDPAVRKGGYTTEEDELIIFLQGEVGNRWADIAKRLTGRTENAV
KIRWKALNRRQRDARNKAAAAAASASIVHRPLSRHSGGGGAATAAPATGG
HLSSSSSSSSSLSDTGGGGGGARERMTVGSAGMLQHHQHHQRPPGVARTS
STSSSSSSSSSSSSPNLGLLSRGLGKPKGGGPAGGGGGTRAAIDTGGMGP
GPSGLWSPSTRGGGGGGSYYSDPGPWASVQEDGRRPLQNPAAAYAAAGGA
AGLSNGRVSAPKNGHQKQAVGVAPAPSAPLSRIEWPVELAAGAAAASAAV
STPKVETVAAARVSPPRYPSAAGEDAARSATKMEVPGDGGLHRLCAALRN
VEAMDTLDRSQGDATPSAAAGSSGRSSSPERAEPQGGGVGGGGGAPPAKH
SNGGQTPLPSSHSLPDGDQQAGTAVEAEDGQTRQSQQQQQRQQQNQQQQK
QAGSPTATATKAVRMCVSGFTPIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR015495Myb-like_TF
IPR017930Myb_dom
IPR009057Homeobox-like_sf