prot_C-linearis_contig9.16583.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16583.1
Unique Nameprot_C-linearis_contig9.16583.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length277
Homology
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 9.330e-22
Identity = 122/210 (58.10%), Postives = 147/210 (70.00%), Query Frame = 0
Query:   15 LAAGADVEIQDRCGYTALNNSPGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIELKDVGAWTPLCLDATSCRCI-AVRARLRHVANAHARNNDGNTPLHLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARMLE---SPRPWPSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRS--RTFRART 218
            L AGADV I+D C ++AL+++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E  + G+  P    AT  R + A+   L H A+  A++ +GNTPLH+AC  Q + L+  VDLLLR  ADE   NN GK PA +L+   +     +CS   + + R+LL RA  DRAWRRRCWLVMLRS  RT +A T
Sbjct:  226 LTAGADVTIRDNCDHSALDSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSEGGSLAPPLFSATDPRNLKAMHTLLWHGASLTAQDTEGNTPLHVACYRQHKGLEAPVDLLLRWGADETALNNAGKTPAGLLDEHDNENDRTTCSEAEINRVRMLLARAPADRAWRRRCWLVMLRSFARTAKATT 435          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: D7FLL7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL7_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.360e-21
Identity = 65/131 (49.62%), Postives = 78/131 (59.54%), Query Frame = 0
Query:   88 ELKDVGAWTPLCLDATSCRCIAVRARLRHVANAHARNN---DGNTPLHLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARMLESPRPW-PSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRSRTF 214
            ELK VG WTPL   A   R   V A L++  NA  RN     G+TPLH AC  Q+E L  ++DLLLR  ADE   N  G+ P  +L + R   P CSP  +++ RLLL RA  DR WRRR WLV+LRSRT 
Sbjct:  302 ELKSVGGWTPLHAAAEHHRVNCVAALLQN--NASVRNRFDATGDTPLHRACVEQREGLAASIDLLLRWGADETARNKRGRTPLDVLGATRTDNPHCSPDEVDRARLLLVRAPTDRRWRRRGWLVVLRSRTI 430          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 8.220e-17
Identity = 64/164 (39.02%), Postives = 79/164 (48.17%), Query Frame = 0
Query:  110 VRARLRHVANAHARNNDGNTPLHLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARML---------ESPRPWPSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRSRTFRARTAGCDNRGVTGYESIGADAQGEGGHPGCGGARTRLGIRVAWLRRPAT 264
            + A  +H A    R N G TPLH  C  + E L+  VD+LLR  ADE T N  G  PA  L          +P P        +++ RLLL RA  DRAWRRR WLVMLRSR  +A+   C + G  GY+       G+GG  G        G+  A   RP T
Sbjct:    1 MHALFQHGAQVGVRGNQGYTPLHETCWERHEGLEAAVDMLLRWGADETTLNYGGASPADFLGGRYGKVIGHNPAPQDE-----IDRTRLLLSRAPADRAWRRRGWLVMLRSRDSKAQEGKCRSSG--GYD------HGDGGEVGGSEMARSEGMAGADYGRPGT 151          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 8.640e-16
Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  127 GNTPLHLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARMLE---SPRPWPSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRS--RTFRART 218
            G TPLH AC  Q   ++ TVDLLLR  ADE   +N+ K PA +L+   +     +CS   +EQ RLL+ RA  +RAWRRRCWLVMLRS  +T RA T
Sbjct:  257 GGTPLHWACYWQVRGVEATVDLLLRWGADETALDNDSKTPADLLDEDDNENDRTTCSEAEIEQVRLLMARAPANRAWRRRCWLVMLRSYAKTARATT 353          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 4.990e-14
Identity = 57/132 (43.18%), Postives = 72/132 (54.55%), Query Frame = 0
Query:  126 DGNTPLHLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARML--ESPRPWPSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRS--RTFRARTAGCDNRGVTGYESIGADAQGEGGHPGCGGARTRLG 253
            +G TPLH AC  Q   ++ TVDLLL+  ADE   +N+G  PA  L   +     +CS   + + RLLL RA  +RAWRRRCWLVMLRS  +T RA T        TG    G++  G+     C GAR   G
Sbjct:  279 EGTTPLHRACYRQDIGVEATVDLLLQWGADETAVHNDGNTPADWLVENNNENGTTCSTAEIGRVRLLLARAPANRAWRRRCWLVMLRSCAKTARATTD------KTGDADEGSNDVGDRKDGKCKGARRENG 404          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 4.620e-12
Identity = 55/141 (39.01%), Postives = 69/141 (48.94%), Query Frame = 0
Query:  124 NNDGNTPLHLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARMLES---PRPWPSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRSRTFRARTAGCDNRGVTGYESIGA---------DAQGEGGHPGCGGARTRL 252
            + DGNTPLH AC  + + ++ TVDLLLR            + P  ML+         +CS    E+ RLLL RA  +RAWR RCWLVMLRS    AR A  D  G    +S  A          A+ E G    GG R+R+
Sbjct:  275 DTDGNTPLHRACYWRDKGMEATVDLLLRXXXXXXXXXXXXQTPVDMLDEHDDENDGTTCSEAEFERVRLLLARAPANRAWRHRCWLVMLRSCAKTAR-ANSDATGDADEDSNDARDRKVGKCKGARRENGESAGGGVRSRM 414          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 4.700e-8
Identity = 56/148 (37.84%), Postives = 71/148 (47.97%), Query Frame = 0
Query:  112 ARLRHVANAHARNNDGNTPLHLACRTQQEALD-TTVDLLLRSWADEPTANNNGKVPARMLE-------SPRPWPSCSPKY---LEQERLLLGRAANDRAWRRRCWLVMLRSRTFRARTAGCDNRGVTGY-ESIGADAQGEGGHPGCGG 247
            A L+   N   ++N G + LH AC         T VDLLLR  A E   +  G+ P+  L        S    P  S K    +++  +LL RA  DRAWRRRCWLVMLR+R  R R A      + G+ E  G+   GE G  G GG
Sbjct:  290 ALLKREGNFDEQDNAGRSALHWACIGCLSGTGRTAVDLLLRWGASETALDTRGETPSDYLRRGAAAVASSNVTPRNSEKMQREMQRALVLLARAPADRAWRRRCWLVMLRARAGREREA------LVGHDEDDGSYKVGETGAGGSGG 431          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.130e-5
Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 0
Query:  114 LRHVANAHARNNDGNTPL-HLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARMLESPRPWPSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRSR 212
            L+H A+ +A+   G + L ++A R  ++ +   VDLLLR  ADE     NG   A  +    P     P+  E  R LL  A  DRAWRRRC LV+ R+R
Sbjct:  249 LKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRAR 348          
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Match: A0A6H5KE43_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE43_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 3.560e-5
Identity = 37/105 (35.24%), Postives = 48/105 (45.71%), Query Frame = 0
Query:  109 AVRARLRHVANAHARNNDGNTPLHLACRTQQEALDTTVDLLLRSWADEPTANNNGKVPARMLESPRPWPSCSPKYLEQERLLLGRAANDRAWRRRCWLVMLRSRT 213
            A+ A LR  A+     N+G+T LH+A  + +   DT VD+L+R  A E T +  G  PA +                            RAWRRRCWL MLR RT
Sbjct:  337 ALLALLRRGASVDQTTNNGSTALHIAANSGENMGDT-VDILMRWGASEQTVDQQGSTPADVF--------------------------TRAWRRRCWLAMLRGRT 414          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LS36_ECTSI9.330e-2258.10Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FLL7_ECTSI1.360e-2149.62Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LNI8_ECTSI8.220e-1739.02EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JRY1_9PHAE8.640e-1651.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRZ8_ECTSI4.990e-1443.18Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LRS0_ECTSI4.620e-1239.01Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LE08_ECTSI4.700e-837.84Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D7FKL4_ECTSI1.130e-539.00Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5KE43_9PHAE3.560e-535.24Reverse transcriptase domain-containing protein (F... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 27..56
e-value: 2700.0
score: 1.8
coord: 126..159
e-value: 37.0
score: 13.2
coord: 60..89
e-value: 3.7E-4
score: 29.8
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 126..159
e-value: 0.0019
score: 18.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 126..161
score: 10.366
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 60..92
score: 13.838
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..26
score: 9.778
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 27..59
score: 8.63
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 58..187
e-value: 1.8E-24
score: 88.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..57
e-value: 7.4E-11
score: 43.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..167
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 2..91
e-value: 1.1E-10
score: 42.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..166
score: 40.743
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 1..105
coord: 38..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1621732..1622562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16583.1mRNA_C-linearis_contig9.16583.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1621292..1624622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16583.1 ID=prot_C-linearis_contig9.16583.1|Name=mRNA_C-linearis_contig9.16583.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=277bp
MAADAGHLIVVNSLLAAGADVEIQDRCGYTALNNSPGEGHVGILKAILRP
GVDANAANEDGRPALHVAAEDGQADAIDVLIEAGADIELKDVGAWTPLCL
DATSCRCIAVRARLRHVANAHARNNDGNTPLHLACRTQQEALDTTVDLLL
RSWADEPTANNNGKVPARMLESPRPWPSCSPKYLEQERLLLGRAANDRAW
RRRCWLVMLRSRTFRARTAGCDNRGVTGYESIGADAQGEGGHPGCGGART
RLGIRVAWLRRPATGVRLVSVARTEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom