prot_C-linearis_contig9.16579.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16579.1
Unique Nameprot_C-linearis_contig9.16579.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length180
Homology
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: A0A6H5JZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ63_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.540e-43
Identity = 78/113 (69.03%), Postives = 92/113 (81.42%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKGLMVEIFEGVTRRALADAFHFGQTLVGATTSKTHPRKAMFGAGVGHVLRYKYQPDVDRVVAYLQRVNRGLSTAEADAIART 133
            RYAERRRRNGTL  L++ YDD CC+GA DVTKG +++IFEGV RRALAD+FHFGQTLVGATTSK HPRKA+F AGVG +LR K+QPDV  V AYL+RV  G+S  EA+ +  T
Sbjct:  358 RYAERRRRNGTLLALEWFYDDLCCRGADDVTKGWILDIFEGVMRRALADSFHFGQTLVGATTSKNHPRKAVFAAGVGQILRTKHQPDVKVVAAYLKRVIPGMSEMEAERLRTT 470          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 4.020e-40
Identity = 78/160 (48.75%), Postives = 108/160 (67.50%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKGLMVEIFEGVTRRALADAFHFGQTLVGATTSKTHPRKAMFGAGVGHVLRYKYQPDVDRVVAYLQRVNRGLSTAEADAIARTRAWSPFIRTISRPAQEVEDALVKFVAGHANLDKVEVSRKQTPLLRPD 180
            RYA+RRR+ GTL  L++LYDD CC+G  DVTK   V+IF  V R  LAD+FH  Q L GATTSK+H R+ ++  GVG  +R KY+PDVD VV YL R N+ ++ AEA+  A++++ S ++RT+SRP +E    + + V  HA LD     R + PLL+P+
Sbjct:  455 RYADRRRKKGTLHALRWLYDDRCCRGCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAVVEYLMRENKRMTRAEAERKAKSKSMSRYVRTVSRPIEETIAEVSEVVRLHARLDAEGRERGELPLLQPE 614          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.290e-38
Identity = 79/158 (50.00%), Postives = 102/158 (64.56%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKGLMVEIFEGVTRRALADAFHFGQTLVGATTSKTHPRKAMFGAGVGHVLRYKYQPDVDRVVAYLQRVNRGLSTAEADAIARTRAWSPFIRTISRPAQEVEDALVKFVAGHANLDKVEVSRKQTPLLR 178
            RYAERRRR+GTL  L++LYD  CC+GA DVTKG +++IFEGV RRALA++FHFGQ                              PD++ V A+L+RVN G+   EA+ +A+ RAWSPF+RT SRPAQEVED LVK    +  LD+  ++RK+ PLLR
Sbjct:  200 RYAERRRRSGTLLALKWLYDYLCCRGADDVTKGWILDIFEGVMRRALANSFHFGQ------------------------------PDLEEVAAHLKRVNPGMLEMEAEVMAKKRAWSPFVRTYSRPAQEVEDDLVKDAGDYVQLDQAAIARKELPLLR 327          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.740e-38
Identity = 76/160 (47.50%), Postives = 106/160 (66.25%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKGLMVEIFEGVTRRALADAFHFGQTLVGATTSKTHPRKAMFGAGVGHVLRYKYQPDVDRVVAYLQRVNRGLSTAEADAIARTRAWSPFIRTISRPAQEVEDALVKFVAGHANLDKVEVSRKQTPLLRPD 180
            RYA+RRR+ GTL  L++LYDD CC+   DVTK   V+IF  V R  LAD+FH  Q L GATTSK+H R+ ++  GVG  +R KY+PDVD +V YL R N+ ++ AEA+  A +++ S ++RT+SRP +E    + + V  HA LD     R + PLL+P+
Sbjct:  557 RYADRRRKKGTLHALRWLYDDRCCRVCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAIVEYLMRENKRMTRAEAERKAESKSMSRYVRTVSRPIEETIAEVSEVVRLHARLDAEGRERGELPLLQPE 716          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: A0A6H5KHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD6_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 5.170e-18
Identity = 40/54 (74.07%), Postives = 47/54 (87.04%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKGLMVEIFEGVTRRALADAFHFG 74
            RYAERRRRNGTL  L++ YDD CC+GA DVTKG +++IFEGV RRALAD+FHFG
Sbjct:  134 RYAERRRRNGTLLALEWFYDDLCCRGADDVTKGWILDIFEGVMRRALADSFHFG 187          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: A0A6H5KNQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ6_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 8.160e-17
Identity = 39/55 (70.91%), Postives = 45/55 (81.82%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKGLMVEIFEGVTRRALADAFHFGQ 75
            RYA+RRRRNGTL TLQYLYDD CCK A DVT+  M  IF G++R AL+D+FHFGQ
Sbjct:  144 RYADRRRRNGTLPTLQYLYDDMCCKNAVDVTEPWMKSIFTGLSRAALSDSFHFGQ 198          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: A0A6H5L4Z6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z6_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.370e-13
Identity = 34/55 (61.82%), Postives = 44/55 (80.00%), Query Frame = 0
Query:  126 EADAIARTRAWSPFIRTISRPAQEVEDALVKFVAGHANLDKVEVSRKQTPLLRPD 180
            EA+ +A+ RAWSPF+RT SRPAQEVED LVK+V  +  LD+  ++RK+ PLLRPD
Sbjct:    5 EAEVMAKKRAWSPFVRTYSRPAQEVEDDLVKYVGDYVKLDQAAIARKELPLLRPD 59          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: D8LRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE6_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 7.460e-7
Identity = 26/42 (61.90%), Postives = 34/42 (80.95%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKGLMVEIFEGV 62
            RYAERRRR+GTL+TLQ++ DD CC+GA DV +  ++ IF GV
Sbjct:  398 RYAERRRRSGTLTTLQWIIDDLCCRGAKDVKQYFLMNIFPGV 439          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: A0A6H5J582_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J582_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 9.730e-7
Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKG 53
            RYA+RRRRN TL  L++LYDD CC+GA DVTKG
Sbjct:   48 RYADRRRRNRTLLALEWLYDDLCCRGADDVTKG 80          
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Match: A0A6H5KAB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAB7_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.610e-6
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0
Query:   21 RYAERRRRNGTLSTLQYLYDDTCCKGAADVTKG 53
            RYAERRRRNGTL  L+++YDD CC+GA DVTKG
Sbjct:  303 RYAERRRRNGTLLALEWVYDDLCCRGADDVTKG 335          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JZ63_9PHAE1.540e-4369.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLQ5_ECTSI4.020e-4048.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB16_9PHAE1.290e-3850.00Integrase catalytic domain-containing protein n=1 ... [more]
D8LRE7_ECTSI1.740e-3847.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHD6_9PHAE5.170e-1874.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNQ6_9PHAE8.160e-1770.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4Z6_9PHAE3.370e-1361.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRE6_ECTSI7.460e-761.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J582_9PHAE9.730e-772.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAB7_9PHAE1.610e-675.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1536518..1537592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16579.1mRNA_C-linearis_contig9.16579.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1536258..1537592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16579.1 ID=prot_C-linearis_contig9.16579.1|Name=mRNA_C-linearis_contig9.16579.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=180bp
MSAAQGRPEGRGNHGRADRGRYAERRRRNGTLSTLQYLYDDTCCKGAADV
TKGLMVEIFEGVTRRALADAFHFGQTLVGATTSKTHPRKAMFGAGVGHVL
RYKYQPDVDRVVAYLQRVNRGLSTAEADAIARTRAWSPFIRTISRPAQEV
EDALVKFVAGHANLDKVEVSRKQTPLLRPD
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