prot_C-linearis_contig9.16569.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16569.1
Unique Nameprot_C-linearis_contig9.16569.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1510
Homology
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: D7FR28_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR28_ECTSI)

HSP 1 Score: 1274 bits (3298), Expect = 0.000e+0
Identity = 908/1479 (61.39%), Postives = 1003/1479 (67.82%), Query Frame = 0
Query:    5 KHNLKLQLEKLDKGNAASPGGRRNKALFAGLLGSERAVASSGGGTRGGXXXXXXXXXXXDGAGDCVLPVGEHGGKSPRNFTPISELVCDGGGGGGRSVLDELRRGFSAKDASS---AAQPGSRPTVKIGKRLRDNTPPK-KNLEFPSSSKPPLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDDDLFNSVNLDVRFVRCEQQKQLQQKRQHERRISGGQEGVGGDGYFRAPPPPTPSRHTFQQTPPSRK------------------------QAKADVAAMEMEVMGKLQRLTELQTQSNQALMEGYEVPERLQEERQSLEKAIPALQKALKAAKATPAGACSTTMTPSTARTPLGNLPMADGGXXXXXXXXXXXXXXXTFVMRTQQSSWGSPPP-STPHDRYAGAGTQPGS---SGAF-EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWVGYGGNEGKPRNYNXXXXXXXXXXXXXXXXXXXEVPRCTEHGERCVKLRSNSDKNPGREFFKCSRPKDGGDQCDFFQWLDGEGNDAGXXXXXXXVXXXXXMPGGIAREGQLNIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLSEAMTSRDTRHTLVQLVSVWRGDTVKALDQRGVRQLEGAGGCKDMAKDESIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCRPGRQAFKLRN--GSERFKVGTSMHDDSPRDQNTRTTQQLIYRTKAKAAKKGKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARGGTPGTALSISPDAVSIASTGNDPEVRGFEDDSDDDFEESLMPKRRKSIGS------GAGGSHGWKGKETKKTLKRMSQSQREGFEEALIDWRNDQAEKFQARYFFILPAPEVLEVLHKVPITKEELRTIGSWRGDQKLANHGDSLVAMIQGFLEKHHITLMGEFPWEEDQDAQTVEF 1442
            K NLKLQLEKL+K NAASPGGRRNK LFAGLLG + A   S GG R  XXXXXXXXXXX      V+ +GEHGGK+ R+FTPI++L  D G G GR +LD+LRR + AKD SS   A +PGSRP+V  GKRLRD   PK K  + P ++    A       XXXXXXXXXXXXXXXXXXXXXX                 FD+    + +LD   ++ +Q                                                                        +A+AD+A  EME+ GK+QRL ELQ Q+ QALMEGYEVP++LQEERQ LE AI  L K L+A KAT A    ++ TP  ARTPLGNLPM  G  XXXXXXX       TFVMRTQQS WGSPPP  TP DRYAG+G+       S AF  G                    XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXX          +     EHGERCVKL S S+ NPGREF+KC  PK+GG+QC FF+WLDGEGN          +      PGG+A   QL+I  +VS IFGHAKFR GQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQV+QM   GV+A Y+NSEQDYDSEVRVVMDQLY LQDYGGLKLLYITPEKFCRSPSM KALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKA +LDE               +A V+QSFPGQSGIVYCLSRKDCEKVA+GL KKL E     GHRGRFRVDFYHADRTA EKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSL F+RR +NLQEVYKCVRFCINEVECRRVLILEFFGEHFPR RC+ATCDNCIAMQGC +ETKDCTEQA  LLRLSE M  R+ RHTLVQLVSVWRGD+VK LDQRG RQLE AG CKDM KDE+IRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYC PGR   + +   G  R K G                     + + +A K G+D  XXXXXXXXXXXXXXXXXXXXXXX                XXXXXXXXXXXXXXXXXXXXXXXXXXXX                            GGTPGTAL ISP  +S+ S+G                                    G GG  G   K+T++TLKRMS   R  F++ALI WR+++AE+F  RYF+I P  E+LEV+HKVP+T EEL  IGSWRG+QKLA HG+SL+++I+G+++ ++ITL G+FPW  DQ+ +T  F
Sbjct:    2 KDNLKLQLEKLEKDNAASPGGRRNKGLFAGLLGIDGAP--SRGGQRXXXXXXXXXXXXXX-XXXFVVMIGEHGGKASRSFTPIADLGVDTGAGSGRGLLDQLRRSYKAKDGSSSSTAPKPGSRPSV--GKRLRDEIAPKQKRFDHPGATTATAAPSSKGFGXXXXXXXXXXXXXXXXXXXXXXLYDAD------------FDEAAAVAFDLDQAVIQAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKAQADIATTEMEIAGKIQRLGELQAQTTQALMEGYEVPQKLQEERQGLETAIAGLGKTLRALKATAAAESPSSQTPRGARTPLGNLPMTGGDGXXXXXXXH------TFVMRTQQS-WGSPPPPGTPRDRYAGSGSGGADHQRSPAFGRGAGGYDNSYGGSSYDNSSSGGXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYNNNREDGGDGTPLCEHGERCVKLTSTSENNPGREFYKCPLPKNGGEQCGFFEWLDGEGNGGNRPSGGGGL------PGGVANGKQLDIRKEVSDIFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVAQMRATGVEAAYINSEQDYDSEVRVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAAVLDE---------------IAKVMQSFPGQSGIVYCLSRKDCEKVASGLLKKLSETT--GGHRGRFRVDFYHADRTAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLPFQRRQSNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRGRCKATCDNCIAMQGCEKETKDCTEQAGRLLRLSEVMVEREIRHTLVQLVSVWRGDSVKTLDQRGARQLECAGSCKDMTKDEAIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCSPGRAGLQAQESQGEIRGKSG---------------------KERGRAKKTGRDKQXXXXXXXXXXXXXXXXXXXXXXXHWNVGEARKGKKAAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPQKRKGPGHRG---------------GGTPGTALDISPGVISVPSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGGGKGKGHKKTRETLKRMSDEHRARFKDALIKWRDERAEQFSLRYFYIFPETELLEVIHKVPVTSEELCDIGSWRGNQKLATHGESLLSLIKGYIDDNNITLQGQFPWG-DQEIKTAGF 1396          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: A0A6H5L064_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L064_9PHAE)

HSP 1 Score: 599 bits (1544), Expect = 5.330e-199
Identity = 312/387 (80.62%), Postives = 320/387 (82.69%), Query Frame = 0
Query:  568 MPGGIAREGQLNIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLE 954
            +PGG+A   QL+I  +VS IFGHAKFR GQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQV                       RVVMDQLY LQDYGGLKLLYITPEKFCRSPSM KALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAG+LDE               +A V+QSFPGQSGI           VA+GL KKL E     GHRGRFRVDFYHADRTA EKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLE
Sbjct:   22 LPGGVANGKQLDIRKEVSDIFGHAKFRTGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQV-----------------------RVVMDQLYRLQDYGGLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGVLDE---------------IAKVMQSFPGQSGI-----------VASGLLKKLSETT--GGHRGRFRVDFYHADRTAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLE 357          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: A0A7S4EMT8_9STRA (DNA helicase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EMT8_9STRA)

HSP 1 Score: 552 bits (1423), Expect = 3.660e-169
Identity = 303/645 (46.98%), Postives = 406/645 (62.95%), Query Frame = 0
Query:  501 EVPRCTEHGERCVKLRSNSDKNPGREFFKCSRPKDGGDQCDFFQWLDG-EGNDAGXXXXXXXVXXXXXMPGGIAREGQLNIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNR---DKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLSEAMTSRDTRH-TLVQLVSVWRGDTVKALDQR-GVRQLEGAGGCKDMAKDESIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCRPGRQAFKLRNGSERFKV 1139
            + PRC  HG  C  L +N+  N GREFFKCS P+  G+ CDFFQW DG EGN                  GG      LN+  +  R+FGH  FR GQE+VI  A++G+DVFVLMPTGGGKSLCYQLPA CCPGLAVV SPL+SL+QDQV  +L  GV++ + +S QDY SE   +  QL     +GG+KLLY+TPEK   S  M   L+RLH+KGL+SRF++DEAHC+SDWGHDFRPDY +LG LR+D+P VP+MALTATA+  V +D +R L +RN      SFNRPNL+YE+R K   + D                +A +V   P  SG++YCLSRK+CE++A  L KKL E     G R    V FYHAD   +E+   H++WS GRI+++CAT+AFGMGI+KPDVRYVIH+SMPK+LTH+YQESGRAGRDG D++C++F++Y+DK  LE M+     DK     RR   + ++YKCV++C NE  CRR + LEFFG+ F R +C  TCDNC A  G   + ++ T +A  ++ L  + +++  +  T++QL  ++RG   KA+ +   +  +EG G      K +  ++   M+    L E S +          FT+ Y   G +A  L+ GSE+F V
Sbjct:  438 DTPRCPGHGLPCRLLTANTSANSGREFFKCSLPE--GENCDFFQWKDGMEGN---LNNNNFLEGSSTSSAGGDV----LNMREENRRVFGHRSFRKGQEDVIEKAIQGRDVFVLMPTGGGKSLCYQLPAWCCPGLAVVVSPLLSLIQDQVQSLLKNGVKSVFFSSAQDYHSEQVDINRQLNETTAHGGVKLLYLTPEKLSHSNQMQSILRRLHNKGLISRFIVDEAHCLSDWGHDFRPDYNQLGRLRRDYPGVPLMALTATASEKVVNDAVRALGMRNEYRYQSSFNRPNLRYEVRKKDGKVTDA---------------IADIVAQRPNDSGVIYCLSRKNCEQLAEKLQKKLRE----KGCRNVL-VSFYHADLDPKEREHRHKQWSVGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSLTHYYQESGRAGRDGEDAECVLFYSYKDKQVLEKMIRNGSDDKCNPSIRR--KVDQLYKCVQYCENEFRCRRAMQLEFFGQKFDRAKCNQTCDNCKA--GRLPDERNMTAEAITIINLFNSASNQSRKGITMLQLAELYRGSKSKAITKSYPINVIEGFGAGSKFKKHDIDKITHGMIFQRILVENSVENKGG------FTSDYVALGEKAASLQRGSEKFIV 1043          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: A0A836CQM3_9STRA (DNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQM3_9STRA)

HSP 1 Score: 543 bits (1399), Expect = 1.270e-167
Identity = 312/655 (47.63%), Postives = 398/655 (60.76%), Query Frame = 0
Query:  501 EVPRCTEHGERCVKLRSNSDKNPGREFFKCSRPKDGGDQCDFFQWLD--GEGNDAGXXXXXXXVXXXXXMPGGIAREGQLNIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDT-----IRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADR----TAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNC--IAMQGCGQETKDCTEQAACLLRLSEAMTSRDTRHTLVQLVSVWRGDT---VKALDQRGVRQLEGAGGCKDMAKDESIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCRPGRQAFKLRNGSERFKV 1139
            + P C EHG   V   S +  + GR F+ CS+ +D G+QC+FFQW D  GE   AG                   +  QL+I+ Q+  +FGH +FR+GQEEV+  AM+G+DVFVL+PTGGGKSLCYQLPA CCPGL VVFSPL+SLV DQ                     +E+  VMD+LY L  +GGLKLLYITPEK  +S ++ + L+RL+ +GLLSRFVIDEAHC+SDWGHDFRPDYLKL  LR+D+P VPIMALTATA+  V DD      +RRL LR   +  +SFNRPNL+YEIR K   I+++               +A VV  +P +SGIVYCLS+++CE V+  L    G  A+      R RVDFYHA+R    ++ EK R H EW+ GR  LICAT+AFGMGINK DVRYVIHHS+PK+LTH YQESGRAGRDG  ++CIVFF++ DK RL+NM+ +                          VECRRVL+L  FGE F R RC ATCDNC  +A  GC     +C +Q   LLRL+  +  +  R TL+ L S+WRG+    +KAL      +L   G     +K E+ R+ QQMVL  +L+E + +TG  GA G  F A+Y + G  A  L +    F V
Sbjct:  248 DAPMC-EHGLPAVCRTSGTSVSAGRRFYCCSKGRDSGEQCNFFQWKDVGGEWEGAGGSGQQAD------------QSQQLDIFEQLRTVFGHLRFRHGQEEVVRAAMRGRDVFVLIPTGGGKSLCYQLPAVCCPGLTVVFSPLLSLVHDQ---------------------AEIAPVMDELYQLPPFGGLKLLYITPEKLDKSGAIKQVLRRLYERGLLSRFVIDEAHCLSDWGHDFRPDYLKLDSLRRDYPKVPIMALTATADKKVMDDAXXXXXVRRLGLREHLLHKQSFNRPNLEYEIRKKSKKIVED---------------IAEVVLRYPDESGIVYCLSKRECEVVSEKLNAHEGIRAK------RIRVDFYHAERAPQASSSEKKRAHTEWTMGRTKLICATVAFGMGINKIDVRYVIHHSLPKSLTHLYQESGRAGRDGKRAECIVFFSFNDKNRLKNMITK--------------------------VECRRVLLLGHFGEPFQRARCNATCDNCRALAQGGCEAREVNCLQQGRELLRLATQLVLQGRRLTLMHLASLWRGEKHAGLKAL-LPAAEKLPDFGAGSGFSKAEAERMVQQMVLHHYLDEDTVETGNGGAGGLKFQASYVKRGHLAAGLESNDGAFTV 820          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: A0A7S4SBW1_9STRA (ATP-dependent DNA helicase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SBW1_9STRA)

HSP 1 Score: 513 bits (1322), Expect = 8.890e-161
Identity = 279/569 (49.03%), Postives = 371/569 (65.20%), Query Frame = 0
Query:  502 VPRCTEHGERCVKLRSNSDKNPGREFFKCSRPKDGGDQCDFFQWLDG-EGNDAGXXXXXXXVXXXXXMPGGIAREGQL-NIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMV----NRDKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLS-EAMTSRDTRH-TLVQLVSVWRGDTVK 1062
             P C  H   C  +  ++  N GR+F+KCS P+  G QCDFFQW DG EGN          +        G+   G+L +IY +  R FGH  FR GQ++VI  AM+G+DVFVLMPTGGGKSLCYQLPA CCPG+AVV SPL+SL+QDQV  M  +GV++ +LNS QD++SE R ++ +L ++  +GG+KLLYITPEK   S  +   + +L+++G+LSRFV+DEAHC+SDWGHDFRPDY +LG LR D+P+VP+MALTATAN  V  D IR L++RN  +   SFNRPNL YE+R K +  +D               +MA  +      SG++YCLSRKDCE V+  L +KL E  +G  + G   V FYHA+    E+ R H  W +GRI ++CATIAFGMGI+KPDVRYV+H+SMPK++TH+YQESGRAGRDG  + CI+F++YRDK  LE M+    N   + S  R+++ L   Y C+R+C NE  CRR + LEFFGE F R  C  TCDNC   QG   +  D T+ A  +++L  +    ++ R  TLVQL  +++G   K
Sbjct:  186 TPLCPGHNAPCRTVTVSTANNAGRQFYKCSMPE--GKQCDFFQWADGMEGN------LNDSMSGGMGGGDGVYGSGELKDIYAESRRKFGHNSFRPGQKKVIEKAMQGRDVFVLMPTGGGKSLCYQLPAWCCPGVAVVVSPLLSLIQDQVQSMTKLGVESVFLNSMQDFESEQRDILRRLDNVSSHGGIKLLYITPEKLRHSGMIKSVMTKLYNRGMLSRFVVDEAHCLSDWGHDFRPDYNQLGCLRSDYPNVPMMALTATANEKVVQDAIRALKMRNEHLYRSSFNRPNLAYEVRKKDSKSID---------------VMADYIAKRRNDSGVIYCLSRKDCETVSDKLQEKLRE--KGCSNIG---VSFYHAELDPSERQRRHHMWGSGRISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGDKADCILFYSYRDKKILEMMIRKTANNQNNQSTRRKIDQL---YSCLRYCENEFLCRRTMQLEFFGEKFDRSLCNKTCDNC--RQGKIADRHDLTDVAKEIIKLFLDTQAEKNGRGVTLVQLTDLFKGSKNK 721          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: A0A1E7EUD2_9STRA (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUD2_9STRA)

HSP 1 Score: 512 bits (1318), Expect = 1.290e-154
Identity = 304/652 (46.63%), Postives = 407/652 (62.42%), Query Frame = 0
Query:  502 VPRCTEHGERCVKLRSNSDKNPGREFFKCSRPKDGGDQCDFFQWLDGE-----GNDAGXXXXXXXVXXXXXMPGGIAREGQLNIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDK----SLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLSEAMTSRDTRHT----LVQLVSVWRGDTVKALDQRGVRQ-LEGAGGCKDMAKDESIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCRPGRQAFKLRNGSERFKV 1139
             P C  H + C    +N+  N GR+FFKCS P+  G  CDFFQW DG+      ND  XXXXXXX XXXXX     +    L++Y +  R+FGH  FR GQ+ VI  A++GKDVFVLMPTGGGKSLCYQLPA CCPGLAVV SPL+SL+QDQV  +   GV++ + +S QDY +E   +  QL     +GG+KLLY+TPEK   S  M   L+RL++KGL+SRFV+DEAHC+SDWGHDFRPDY +LG+LRKD+P VP+MALTATAN  V +D I  L +                  +R K   ++D                +A ++ S P  SG++YCLSRK+CE+VA  L  KL E  +  GH G   V +YHA+   +E+ R H++WS+GRI+++CAT+AFGMGI+KPDVRYVIH+SMPK++TH+YQESGRAGRDG ++ CI+F++Y+DK  LE M+        S S +R+++ L   Y C+ +C ++  CRR + LEFFGE F R +C  TCDNC A  G   + +D T++A  ++ L  +  SR  R+T    ++QL  ++RG   KA+ +      LEG G      KDE  R+  +M+    L E S +      TG  FT+ Y   G  A  L+NGS+RF V
Sbjct:  396 TPLCPGHSQPCRVFTANTSTNMGRQFFKCSLPE--GQNCDFFQWKDGDVEENNWNDXXXXXXXXXXXXXXXXXXXTSGGNILDMYEENQRVFGHRTFRKGQQLVIEKAIQGKDVFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQSLTKYGVKSVFFSSHQDYQTEQVDINRQLNQTTAHGGVKLLYLTPEKLRHSNQMQSILRRLYNKGLISRFVVDEAHCLSDWGHDFRPDYNQLGVLRKDYPGVPLMALTATANKKVVNDAIGALGM------------------LRKKDGKVIDA---------------IADLIASRPKDSGVIYCLSRKNCEQVAEKLRGKLRE--KKCGHVG---VSYYHAELDPQERERRHKQWSSGRINVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDNADCILFYSYKDKQVLEKMIRSGNGGRYSPSIQRKIDQL---YGCLNYCEDDFRCRRTMQLEFFGETFDRAKCNKTCDNCKA--GRLADNRDMTKEAISIINLFNSA-SRKKRNTSGITMLQLTDLYRGSKSKAITKNYTTSGLEGYGAGSKYKKDEVERITHKMIFDRILIENSVEN-----TG-GFTSDYVSLGDAAPPLQNGSKRFFV 995          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: B7FSW6_PHATC (ATP-dependent DNA helicase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSW6_PHATC)

HSP 1 Score: 473 bits (1217), Expect = 7.360e-149
Identity = 247/522 (47.32%), Postives = 343/522 (65.71%), Query Frame = 0
Query:  586 RIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRD-KSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRL-SEAMTSRDTRHTLVQLVSVWRGD----TVKALDQRGVRQLEGAGGCKDMAKDESIRVAQQMVLSSFLEE 1101
            R FGH +FR GQ+++I +A++G D+FVLMPTGGGKSLCYQLPA CCPGLAVV SPL+SL+QDQV  +  +G++A +L S QDY +E   +  +L     +GG+KLLYITPEK   S  +   ++RL +K L+SRFV+DEAHC+SDWGHDFRPDY++L  +R+++P+VP+MALTATAN  V +D IR L ++N      SFNR NL YE+R K    L+               ++A  + S P +SG+VYCLSRKDCEK +    +KL E AR      R R+ FYHAD    E+ + HREWS G + ++CAT+AFGMGI+KPDVRYVIH+SMPK++TH+YQESGRAGRDG D+ CI+++ Y+DK  LEN++ +  K+   +     + ++Y CV++C +   CRR + LEFFGEHF R +C  TCDNC A  G   + +D TE A  ++ L ++    +    TL Q+  ++RG      VK +D   V++L G G  ++  K E  ++   ++    L E
Sbjct:    7 RKFGHQEFRAGQQKIIKNAIQGCDIFVLMPTGGGKSLCYQLPAWCCPGLAVVISPLLSLIQDQVQALTQLGIEAVFLASTQDYQTEQMDITRRLNETTAHGGVKLLYITPEKLNNSTMIQNIIRRLCNKNLISRFVVDEAHCLSDWGHDFRPDYMRLDSVRREYPNVPLMALTATANEKVVNDAIRALGMKNEYRYQSSFNRSNLHYEVRKKDGQTLE---------------VIADYIASRPKESGVVYCLSRKDCEKTS----QKLQEIARQRPGCNRIRISFYHADLDPHEREQRHREWSNGGVSVLCATVAFGMGIDKPDVRYVIHYSMPKSITHYYQESGRAGRDGDDADCILYYHYKDKKILENLITKSSKNPHSQTTRRQIDQLYGCVQYCEDLFRCRRTMQLEFFGEHFERGKCNKTCDNCKA--GRTPDRRDLTEDAKTIINLHTDVSKQKRNGTTLHQITELFRGSKSQAAVKFID---VKKLPGYGAGRNYKKFEIDKIVHALIFERTLVE 504          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: B8BWN4_THAPS (ATP-dependent DNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN4_THAPS)

HSP 1 Score: 472 bits (1214), Expect = 3.190e-148
Identity = 259/548 (47.26%), Postives = 346/548 (63.14%), Query Frame = 0
Query:  605 MKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNR--DKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLSEAMTSRDTRHTLVQLVSVWRGDTVKALDQRGVRQ-LEGAGGCKDMAKDESIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCRPGRQAFKLRNGSERFKVGTSMHDDSPR 1149
            MKG+DVFVLMPTGGGKSLCYQLPA CCPGL+V+ SPL+SL++DQV  M  +GV++ +LNS Q ++ E R ++D+L     +GG+KLLYITPEK   S  +   L  L + G +SRFV+DEAHC+SDWGHDFRPDY +LG LR+D+P+VP+MALTATAN  V  D IR L +RN      SFNRPNL YE+R K    +D                +A  +      SG++YCLSRKDCE ++  L  KL E     G R   RV +YHA+    E+ + H  WS G I ++CATIAFGMGI+KPDVRYV+H+SMPK++TH+YQESGRAGRDG ++ CI+F+AY+DK  LE M+ +    +   +  L  +  +Y C+R+C N  ECRR L L+FFGE F + +C  TCDNC    G  +E +D T  A  +L+L +   SR    TL QL  +WRG   KA  +  + + L G G  K ++K E+  +   MV    +EE+S +T     TG  F A Y  PG+ A  +++G ++F V  S   D P+
Sbjct:    1 MKGRDVFVLMPTGGGKSLCYQLPAWCCPGLSVIISPLLSLIEDQVQSMTKLGVRSVFLNSAQSWEDEQRNIVDELRRTPIHGGIKLLYITPEKLAHSNMIKGVLSNLANNGRISRFVVDEAHCLSDWGHDFRPDYNQLGCLRRDYPNVPLMALTATANKKVVSDAIRALGMRNEYSYRSSFNRPNLHYEVRRKDNKTVDT---------------IADYIAERRNDSGVIYCLSRKDCETLSDKLNNKLRE----KGFRD-VRVSYYHAELDQRERHQRHHAWSLGHISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGGNADCILFYAYKDKKTLEMMIRKAAGHNQRSQATLRKIDHLYTCLRYCENTFECRRTLQLQFFGEMFEKHKCNKTCDNCRL--GLVEEKRDMTNSAREILQLLD---SRGRGVTLHQLAELWRGTKSKAHTKFLITENLNGYGKGKAVSKSETDALVHAMVFEGVIEELSEET-----TG-GFAADYVHPGKNAALVQSGRQQFFV--SFPKDPPK 515          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: A0A4D9D6D9_9STRA (DNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6D9_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 5.620e-142
Identity = 283/637 (44.43%), Postives = 372/637 (58.40%), Query Frame = 0
Query:  505 CTEHGERCVKLRSNSDKNPGREFFKCSRPKDGGDQCDF-FQWLDGEGND-AGXXXXXXXVXXXXXMPGGIAREGQLNIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLSEAMTSRDTRHTLVQLVSVWRGDTVKALDQRGVRQLEGAGGCKDMAKDESIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCRPGRQAFKLRNGSERFKV 1139
            C++ G+      + +D N GR+F+KC         CD  F+W D EG +  G             +P  +      +      RIFGH  FR GQE+V+  A+  +DVFVLMPTGGGKSLCYQLPAC  PG+ VVFSPL+SL+QDQV  +   GV A  L S QDY++E R +MD+LYHL  +G LKLLYITPEKF RS +M+K LQRL  +GLL+RFVIDEAHC+S WGHDFRPDYL L  +R  FP +PIMALTATAN  + +D ++ L++++P +  +SFNRPNL Y+IRPK            P  L A   +   V +  P  SGIVYCLSRKD E++AT L +K            R RV +YHAD   +E+ R HREWS GR+ +I AT+AFGMGINKPDVRYVIH S+PK+LTH+YQESGRAGRDGL ++C ++++++                                     V+CRR LI+++FGE F   RC+ TCDNC        +  D TE A  ++RL ++M     + TL QL S+ RG+ +    + G  + E  G     +K +  R+ QQMVL  FL E   +  A+G     F A Y + G +A  L N + R  V
Sbjct:  408 CSKCGKPLEARVARTDTNAGRKFWKCF-------DCDADFRWDDEEGGERGGDYGERASFPIHHELP--VHNISMQDAAQCNHRIFGHRSFRLGQEKVVEAALSLRDVFVLMPTGGGKSLCYQLPACLTPGITVVFSPLLSLIQDQVEGLRENGVDAAQLTSHQDYETEGREIMDRLYHLPAHGSLKLLYITPEKFARSDAMVKCLQRLKDRGLLARFVIDEAHCISQWGHDFRPDYLMLRSIRDKFPSIPIMALTATANQRLLEDAVKLLKMQSPYIHQQSFNRPNLTYDIRPKSKA--------SPAFLGAIDEIAEYVKKKGPRSSGIVYCLSRKDTERIATALAEKT-----------RLRVGYYHADMPPKERERAHREWSQGRMPVIAATVAFGMGINKPDVRYVIHFSLPKSLTHYYQESGRAGRDGLPAECRMYYSFK-------------------------------------VDCRRTLIMQYFGEAFDPSRCKRTCDNC--RNEAAVQALDLTELAKNVIRLVDSMAGM--QFTLCQLASLVRGENLAWARKTGADKEELFGCGSQHSKGDVERLTQQMVLQHFLAEEMVEL-ANG-----FPANYVQLGVEAEALMNDASRRLV 969          
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Match: K0SNN9_THAOC (DNA helicase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNN9_THAOC)

HSP 1 Score: 471 bits (1213), Expect = 3.880e-139
Identity = 264/592 (44.59%), Postives = 362/592 (61.15%), Query Frame = 0
Query:  579 NIYTQVSRIFGHAKFRNGQEEVIVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVSQMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCRSPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAGILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLTKKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIAFGMG---------------------------INKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNR-DKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEHFPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLSEAMT-SRDTRH-TLVQLVSVWRGDTVKALDQ-RGVRQLEGAGGCKDMAKDESIRVAQQMVLSSFLEEVSCDTGASGATGQAFTAAYCRPGRQAFKLRNGSERFKV 1139
            N+++++  +FGH +FR GQ+EVI +AM+G+DVFVL+PTGGGKSLCYQLPA C PGL+VV SPL++L++DQV  M+  GV++ +LNS Q Y+ E + ++ +L  L  +GG+KLLY+TPEK   S  +   +Q L  + L+SRFV+DEAHC+SDWGHDFRPDY  L  LR D+P VPIMALTATAN  V  D+++ L +RN  V   SFNRPNL YE+R K    +D                +   +    G+SG++YCLS+KDCE V+  L  KL E     G R   RV FYHAD    EKAR H EWS+GRI ++CATIAFGMG                           ++KPDVR+V+H+SMPK++TH+YQESGRAGRDG ++ CI+F++Y+DK  LE M+ + D   +       ++++Y CVR+C N  ECRR L L FFGE+F +  C  TCDNC A +    E ++ T +A  ++ L ++++  R+ R  TLVQLV +WRG   K   +      L   G      +D+  R+A  MV    L E++ ++  +G     F   Y  PG  A  + NGS  F V
Sbjct:  456 NVFSELKTMFGHDRFRPGQQEVIENAMRGRDVFVLLPTGGGKSLCYQLPAWCQPGLSVVISPLLALMEDQVQSMVRAGVESVFLNSTQSYEDEQQFIVQKLNQLTPHGGIKLLYVTPEKLTHSGMIRGIIQSLSQRNLVSRFVVDEAHCLSDWGHDFRPDYKNLRNLRHDYPTVPIMALTATANEQVVKDSMQVLGMRNAFVFRSSFNRPNLHYEVRKKDTKTIDT---------------ICEYIAERRGESGVIYCLSKKDCENVSQKLNNKLRE----KGIRN-IRVSFYHADVDPAEKARRHNEWSSGRIAVLCATIAFGMGSKSSALLFCAFSATCPSDPLLSLFRHSVDKPDVRFVMHYSMPKSITHYYQESGRAGRDGNNADCILFYSYKDKKTLEFMIKKADNVRNSAACRRKIEQLYTCVRYCENTFECRRTLQLRFFGENFDKCVCNRTCDNCRADRV--PERRNMTSEAREVIALLDSLSHQRNGRGVTLVQLVELWRGSKSKQHTKFLNTSTLVNYGAGTKYRRDDVDRIAHSMVFDGILNEIA-ESNTAG-----FNCDYVSPGPNANAVMNGSFTFFV 1019          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR28_ECTSI0.000e+061.39DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5L064_9PHAE5.330e-19980.62DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A7S4EMT8_9STRA3.660e-16946.98DNA helicase n=1 Tax=Pseudo-nitzschia australis Ta... [more]
A0A836CQM3_9STRA1.270e-16747.63DNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A7S4SBW1_9STRA8.890e-16149.03ATP-dependent DNA helicase n=3 Tax=Ditylum brightw... [more]
A0A1E7EUD2_9STRA1.290e-15446.63DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
B7FSW6_PHATC7.360e-14947.32ATP-dependent DNA helicase (Fragment) n=1 Tax=Phae... [more]
B8BWN4_THAPS3.190e-14847.26ATP-dependent DNA helicase (Fragment) n=1 Tax=Thal... [more]
A0A4D9D6D9_9STRA5.620e-14244.43DNA helicase n=1 Tax=Nannochloropsis salina CCMP17... [more]
K0SNN9_THAOC3.880e-13944.59DNA helicase n=1 Tax=Thalassiosira oceanica TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 313..333
NoneNo IPR availableGENE3D3.40.50.300coord: 573..786
e-value: 7.9E-79
score: 266.0
NoneNo IPR availableGENE3D1.10.150.80coord: 1337..1422
e-value: 1.4E-7
score: 33.1
NoneNo IPR availableGENE3D3.40.50.300coord: 787..945
e-value: 3.1E-34
score: 119.5
NoneNo IPR availablePANTHERPTHR13710:SF128ATP-DEPENDENT DNA HELICASE Q-LIKE 4Acoord: 585..1424
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 585..1424
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 843..936
e-value: 2.0E-20
score: 83.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 828..935
e-value: 8.3E-13
score: 48.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 819..976
score: 17.092
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 589..795
e-value: 6.2E-27
score: 105.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 601..779
score: 19.852
IPR018982RQC domainPFAMPF09382RQCcoord: 1022..1104
e-value: 8.6E-7
score: 28.7
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 596..765
e-value: 1.2E-15
score: 57.8
IPR032284ATP-dependent DNA helicase RecQ, zinc-binding domainPFAMPF16124RecQ_Zn_bindcoord: 948..1013
e-value: 1.4E-11
score: 44.9
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 504..547
e-value: 5.3E-10
score: 39.2
IPR004589DNA helicase, ATP-dependent, RecQ typeTIGRFAMTIGR00614TIGR00614coord: 586..1072
e-value: 4.1E-147
score: 488.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 946..1135
e-value: 6.0E-30
score: 106.2
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 718..727
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 1343..1424
score: 12.703
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 1345..1423
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 633..955

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1446436..1466616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16569.1mRNA_C-linearis_contig9.16569.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1446425..1469141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16569.1 ID=prot_C-linearis_contig9.16569.1|Name=mRNA_C-linearis_contig9.16569.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1510bp
MPSTKHNLKLQLEKLDKGNAASPGGRRNKALFAGLLGSERAVASSGGGTR
GGKGGRSGGGGDGDGAGDCVLPVGEHGGKSPRNFTPISELVCDGGGGGGR
SVLDELRRGFSAKDASSAAQPGSRPTVKIGKRLRDNTPPKKNLEFPSSSK
PPLASKVASGGGGGVEAGGCAFGGAGSKPRGGSGGGGGGGAGQAFFDDDD
FDDDLFNSVNLDVRFVRCEQQKQLQQKRQHERRISGGQEGVGGDGYFRAP
PPPTPSRHTFQQTPPSRKQAKADVAAMEMEVMGKLQRLTELQTQSNQALM
EGYEVPERLQEERQSLEKAIPALQKALKAAKATPAGACSTTMTPSTARTP
LGNLPMADGGGGSGGGGGSGDGGGHTFVMRTQQSSWGSPPPSTPHDRYAG
AGTQPGSSGAFEGGGGGSGAARFSSTSSRSSWQDGGSSNSGWQGGGGGAG
SYESGGAFGGGGGGGDWVGYGGNEGKPRNYNNNNNNNNNNNNSYDDDDDD
EVPRCTEHGERCVKLRSNSDKNPGREFFKCSRPKDGGDQCDFFQWLDGEG
NDAGGGGGGGRVSGGGGMPGGIAREGQLNIYTQVSRIFGHAKFRNGQEEV
IVDAMKGKDVFVLMPTGGGKSLCYQLPACCCPGLAVVFSPLISLVQDQVS
QMLTIGVQAGYLNSEQDYDSEVRVVMDQLYHLQDYGGLKLLYITPEKFCR
SPSMIKALQRLHSKGLLSRFVIDEAHCVSDWGHDFRPDYLKLGILRKDFP
DVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKYEIRPKKAG
ILDEARATQPHSLRASHFLMATVVQSFPGQSGIVYCLSRKDCEKVATGLT
KKLGEAARGSGHRGRFRVDFYHADRTAEEKARVHREWSAGRIHLICATIA
FGMGINKPDVRYVIHHSMPKTLTHFYQESGRAGRDGLDSKCIVFFAYRDK
ARLENMVNRDKSLSFERRLNNLQEVYKCVRFCINEVECRRVLILEFFGEH
FPRERCRATCDNCIAMQGCGQETKDCTEQAACLLRLSEAMTSRDTRHTLV
QLVSVWRGDTVKALDQRGVRQLEGAGGCKDMAKDESIRVAQQMVLSSFLE
EVSCDTGASGATGQAFTAAYCRPGRQAFKLRNGSERFKVGTSMHDDSPRD
QNTRTTQQLIYRTKAKAAKKGKDKKKKKGGSGDGGGKASGGGGGGKKSKK
PAARQQVNRRRHAVDNEEEDEESESIGQGRRRGKESGTAAGGRKKTHAVM
AVTTPQKRKGSGNHGGGAARGGTPGTALSISPDAVSIASTGNDPEVRGFE
DDSDDDFEESLMPKRRKSIGSGAGGSHGWKGKETKKTLKRMSQSQREGFE
EALIDWRNDQAEKFQARYFFILPAPEVLEVLHKVPITKEELRTIGSWRGD
QKLANHGDSLVAMIQGFLEKHHITLMGEFPWEEDQDAQTVEFSQAAGDDD
GYRSNGEGSTFGAGEEEQGQEEDAEGSDGAALASKFFNKRRDDGGGENAF
DEDILDLQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR018982RQC_domain
IPR011545DEAD/DEAH_box_helicase_dom
IPR032284RecQ_Zn-bd
IPR010666Znf_GRF
IPR004589DNA_helicase_ATP-dep_RecQ
IPR036388WH-like_DNA-bd_sf
IPR002464DNA/RNA_helicase_DEAH_CS
IPR002121HRDC_dom
IPR010997HRDC-like_sf
IPR027417P-loop_NTPase