prot_C-linearis_contig9.16548.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16548.1
Unique Nameprot_C-linearis_contig9.16548.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length156
Homology
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: D7FQY4_ECTSI (Copper transport protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY4_ECTSI)

HSP 1 Score: 236 bits (601), Expect = 1.620e-77
Identity = 121/156 (77.56%), Postives = 133/156 (85.26%), Query Frame = 0
Query:    1 MEMDDGSMSMDMGMNSFSFTCDVGELIFGWWTINTCTAFYLSCLPVILLSVARHWVFHIATSTAASSK-GPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEAMRGCH 155
            MEMDD   SM+M   SFSFTCDVGEL+FGWWT+NTC AFYLSC+PVILLSVARHW F IATSTA SSK G ASR TALL+ N FE SSGR    ++RW RFVWT++ST GAALSLLSMLVVMTYNSGLF+A+L+GEAIGF VWGNHSLPEAMRGCH
Sbjct:    1 MEMDDDMSSMNM---SFSFTCDVGELVFGWWTVNTCWAFYLSCIPVILLSVARHWAFAIATSTATSSKRGSASRNTALLDGNGFENSSGRPP--INRWTRFVWTMVSTTGAALSLLSMLVVMTYNSGLFLAVLVGEAIGFGVWGNHSLPEAMRGCH 151          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A8H2ZHV1_9SACH (Copper transport protein n=1 Tax=Kazachstania barnettii TaxID=61262 RepID=A0A8H2ZHV1_9SACH)

HSP 1 Score: 59.7 bits (143), Expect = 3.100e-8
Identity = 48/160 (30.00%), Postives = 77/160 (48.12%), Query Frame = 0
Query:    5 DGSMSMDMGMN-SFSFTCDVGELIFGWWTINTCTAFYLSCLPVILLSVARHWV----FHIATSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNH--SLPEAMRG--CH 155
            + S SM+M    S+  TC    ++F WW I T   F +SCL V+ L+    ++       A+ T AS++                T++G  ++ ++R  +F  TI        S + MLV MTYN  L +A+++G A+G++ W +   SLP   R   CH
Sbjct:   22 ESSCSMNMLFTWSYKDTC----VVFNWWHIRTRLQFIISCLIVVGLATYYEYLKFRFVKYASETTASNRVST-------------TTNGSGVSQIARREKFYRTIHYGIQVGFSFMLMLVFMTYNGWLMLAVVVGAALGYYRWNDSLVSLPMEQRSLACH 164          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A1D1YNN7_9ARAE (Copper transport protein n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YNN7_9ARAE)

HSP 1 Score: 58.9 bits (141), Expect = 7.960e-8
Identity = 47/168 (27.98%), Postives = 74/168 (44.05%), Query Frame = 0
Query:    6 GSMSMDMGMNSFSFTCDVGEL----------IFGWWTINTCTAFYLSCLPVILLSVARHWV------FHIATSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEAMRG--CH 155
            G    D G      TC +  L          IF WW++N+     LSCL VI L+ +  ++      +     T++ S+    R T     N  E +S   +  ++     V T I TA   LS   ML+ MTYN  L I+++IG A+G++V+   ++    +   CH
Sbjct:   19 GEHGGDHGSEDHGNTCSMNMLFNWDTERLCIIFSWWSVNSIGFLILSCLVVIFLAASFEFLKLVLRKYDSKIYTSSHSQLQEGRDT-----NPEEVASQNNVIRITYTQHLVRTFIHTAQVFLSFFLMLIFMTYNGFLMISVIIGAAVGYFVFAKQTIESGGKSLACH 181          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A015L4R1_RHIIW (Copper transport protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A015L4R1_RHIIW)

HSP 1 Score: 58.5 bits (140), Expect = 9.320e-8
Identity = 45/154 (29.22%), Postives = 72/154 (46.75%), Query Frame = 0
Query:    6 GSMSMDMGMNSFSFTCDVGEL--IFGWWTINTCTAFYLSCLPVILLSVARHWVFHIATSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEAMRG--CH 155
            GS   D       F  D  +L  IF WW +N+     LSC  +ILL+ +  ++           +   S+     + NS E ++    N ++   + V T+I T+   LS   MLV MTYN  L I+++IG AIG++V+ +  +    +   CH
Sbjct:   17 GSHDSDACNMQMLFNWDTEKLCIIFTWWRVNSIGFLILSCFIIILLATSFEFLRFALRKYDTKIQVSYSQLQEGRDANSEEVATQSNANRITYVQQLVRTLIHTSQVFLSFFLMLVFMTYNGFLMISVIIGAAIGYFVFSSSVIDFGGKSITCH 170          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: UPI001C14271D (Hypothetical protein n=3 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C14271D)

HSP 1 Score: 56.6 bits (135), Expect = 1.830e-6
Identity = 37/119 (31.09%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   26 LIFGWWTINTCTAFYLSCLPVILLSVARHWVFHIATSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGN 144
            +IF WW +N+     LSC  +ILL+ +  ++           +   S+     + NS E ++    N ++   + V T+I T+   LS   MLV MTYN  L I+++IG AIG++V+ +
Sbjct:   47 IIFTWWRVNSIGFLILSCFIIILLATSFEFLRFALRKYDTKIQVSYSQLQEGRDANSEEVATQSNANRITYVQQLVRTLIHTSQVFLSFFLMLVFMTYNGFLMISVIIGAAIGYFVFSS 165          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A835YT31_9STRA (Copper transport protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT31_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.780e-6
Identity = 46/162 (28.40%), Postives = 76/162 (46.91%), Query Frame = 0
Query:   12 MGMNSFSFTCDVGELIFGWWTINTCTAFYLSCLPVILLSVARHWVFHI--------ATSTAASSKGPASRTTALLEPNSFETSS----GRQLNLVSRWHRFVWTIIS--TAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEA----MRGCH 155
            M M   S T    ++++ +W + T   + LSCL ++ L V  H++  +            AA  +      +AL++  S   ++      +     R  R    +++  TAG AL+LL MLV MT+NSGLF+A+L G A G W+  +  +  A    +  CH
Sbjct:   15 MAMTFSSLTDYKVKILWDFWNVTTRWQYALSCLTIVALCVLYHYIRSVEMRYTQELVAGRAAQVQAQQQDLSALMDEGSGVLAAPLLRAAKAGAPPRLRRLRLRLVAAGTAGYALALLLMLVAMTFNSGLFVALLAGWAAGQWLCFDAGVAAAGAARVEHCH 176          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A0D7B9D7_9AGAR (Copper transport protein (Fragment) n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7B9D7_9AGAR)

HSP 1 Score: 54.3 bits (129), Expect = 3.190e-6
Identity = 43/140 (30.71%), Postives = 73/140 (52.14%), Query Frame = 0
Query:   26 LIFGWWTINTCTAFYLSCLPVILLSVARHWVFHIA-------TSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEAM---RGCH 155
            ++F  W I++ T F LS + ++L+ VA  ++ HI         +TAA+S+   S +   L  N   T +G     V ++HR V  ++  +   +S   MLV MTYN+ L +A++IG AIG++++    +  A      CH
Sbjct:   29 IVFSSWHIHSSTQFALSFIIIVLMGVAYEYIRHIQRRYDAHIVATAATSRVSRSPSRESLLDN--PTVNGIP---VPQYHRAVRALLYGSAVFVSFFLMLVFMTYNAYLIVAVVIGAAIGYYLFNPELILAASDKGMACH 163          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A176VM04_MARPO (Copper transport protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VM04_MARPO)

HSP 1 Score: 53.1 bits (126), Expect = 8.190e-6
Identity = 37/134 (27.61%), Postives = 63/134 (47.01%), Query Frame = 0
Query:   23 VGELIFGWWTINTCTAFYLSCLPVILLSVARHWVFHIATSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIIST----AGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEAMR 152
            +  L+F  W   T   +YLS + +++ ++   W+F    S A+   GP +     LE N+        L  +      VW II        A+   L ML+VM++N G+FIA+++G  IGF ++      + +R
Sbjct:   11 IATLLFDEWVTRTPLQYYLSLVAIVIFAIIHEWLFMFRVSIASKQNGPRAGG---LENNA------PLLEKLPAPKSGVWDIIVALLYGVNASTGYLLMLLVMSFNGGVFIAVVVGLVIGFALFSTSHSRQTLR 135          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A1X7R593_9SACH (Copper transport protein n=1 Tax=Kazachstania saulgeensis TaxID=1789683 RepID=A0A1X7R593_9SACH)

HSP 1 Score: 53.1 bits (126), Expect = 8.700e-6
Identity = 43/156 (27.56%), Postives = 74/156 (47.44%), Query Frame = 0
Query:    5 DGSMSMDMGMN-SFSFTCDVGELIFGWWTINTCTAFYLSCLPVILLSVARHWVFHIATSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNH--SLPEAMRG--CH 155
            + S SM+M    S+  TC    ++F WW I T   F +SCL  I+ S+A ++ +        +S+   S   ++       T++   ++ ++R  +   T         S + ML+ MTYN  L +A++IG A G++ W +   +LP   R   CH
Sbjct:   22 ESSCSMNMSFTWSYKDTC----VVFNWWHIKTKFQFVISCL--IVASLATYYEYLRFKFVKYASETTGSNRVSI-------TTNNNSISQIARREKLCRTFHYGIQVGFSFMLMLIFMTYNGWLMLAVVIGAAFGYYRWNDSLVALPMEQRSLACH 164          
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Match: A0A8J5QNJ0_9ASCO (Copper transport protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QNJ0_9ASCO)

HSP 1 Score: 52.4 bits (124), Expect = 1.330e-5
Identity = 47/158 (29.75%), Postives = 69/158 (43.67%), Query Frame = 0
Query:    3 MDDGSMSMDMGMN-SFSFTCDVGELIFGWWTINTCTAFYLSCLPVILLSVARHWVFHIATSTAASSKGPASRTTALLEPNSFETSSGRQ--LNLVSRWHRFVWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEAMR--GCH 155
            MDD   SM+M     +  TC    ++F WW I T   F LS   V+LL +   +V       A  +       + +++P        R+  L     W+ F+               MLV MTYN  L IA+ +G AIG ++WG+ S  E++R   CH
Sbjct:   16 MDDDMCSMNMIFTWDWKNTC----VVFRWWHIKTYFGFVLSMFAVVLLGMGYEYV------RAFFANWEREHASTVVQPGQDRRFKLRRGILYGFQVWYSFML--------------MLVFMTYNGWLMIAVAVGAAIGNYIWGSSSQQESVRIMACH 149          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16548.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FQY4_ECTSI1.620e-7777.56Copper transport protein n=2 Tax=Ectocarpus TaxID=... [more]
A0A8H2ZHV1_9SACH3.100e-830.00Copper transport protein n=1 Tax=Kazachstania barn... [more]
A0A1D1YNN7_9ARAE7.960e-827.98Copper transport protein n=1 Tax=Anthurium amnicol... [more]
A0A015L4R1_RHIIW9.320e-829.22Copper transport protein n=8 Tax=Rhizophagus TaxID... [more]
UPI001C14271D1.830e-631.09Hypothetical protein n=3 Tax=Rhizophagus irregular... [more]
A0A835YT31_9STRA2.780e-628.40Copper transport protein n=1 Tax=Tribonema minus T... [more]
A0A0D7B9D7_9AGAR3.190e-630.71Copper transport protein (Fragment) n=1 Tax=Cylind... [more]
A0A176VM04_MARPO8.190e-627.61Copper transport protein n=1 Tax=Marchantia polymo... [more]
A0A1X7R593_9SACH8.700e-627.56Copper transport protein n=1 Tax=Kazachstania saul... [more]
A0A8J5QNJ0_9ASCO1.330e-529.75Copper transport protein n=1 Tax=[Candida] subhash... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007274Ctr copper transporterPFAMPF04145Ctrcoord: 17..142
e-value: 4.4E-13
score: 50.1
IPR007274Ctr copper transporterPANTHERPTHR12483SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERScoord: 2..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 144..155
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..125
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 126..143
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1282221..1288091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16548.1mRNA_C-linearis_contig9.16548.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1282221..1288091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16548.1 ID=prot_C-linearis_contig9.16548.1|Name=mRNA_C-linearis_contig9.16548.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=156bp
MEMDDGSMSMDMGMNSFSFTCDVGELIFGWWTINTCTAFYLSCLPVILLS
VARHWVFHIATSTAASSKGPASRTTALLEPNSFETSSGRQLNLVSRWHRF
VWTIISTAGAALSLLSMLVVMTYNSGLFIAILIGEAIGFWVWGNHSLPEA
MRGCH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007274Cop_transporter