prot_C-linearis_contig9.16547.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16547.1
Unique Nameprot_C-linearis_contig9.16547.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length427
Homology
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Match: A0A6H5JU34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU34_9PHAE)

HSP 1 Score: 367 bits (943), Expect = 4.510e-121
Identity = 251/451 (55.65%), Postives = 286/451 (63.41%), Query Frame = 0
Query:    1 MSLQQLLAECGGRDGGT----EACIAGSDXXXXXXXXXXXXXXGNDSPPVGSTSFPPQEHEA---GDNSDHPT----------------MELGLDSSPSAQSKHGSEGVGARPLREAAEER---QAQETPVTPTKVAGGAAAPAPEASGPTPTAGRMEYTADAMAARLAVIPLEGKNVEEVAAAAVAACQEFGVEMRRFDSRKSSKEPGARMVLVGLACKHGMKNRQKEYLETEAANGIKRRKSSSQRTNCPCKFYVRWPVR-GEKSEHPHLSMTGKCTLEHNHPVQKDAVDEVRRQNKRLDTPTKEACEALTD--AGFKPAVQGKMLEALTGERHNLRAIQNAAAAHARRKTPYDANELLSKDRRLLYVEMLKKATAAVSAGVQTVPPEAMRAVVRTFERSMNTAAMISSGQGAVLGNPQAVRQPAVRSQGTREKSSSEYGGPASRRRAQ 422
            MSL  LL ECGG D G     + CI        XXXXXXXX  G+ S  +GS+   PQE++A   GD+ D P                     LDSSP + S   ++G GARPL EAAE     Q +ETP              PEA   TPTAG  EY+ADAMAARLA IPLEG+++E V AA V A  EFGVEM+R DS+KSSKEPGAR+ L+GLACKH MKNRQKEY E + AN  KRRKS+S+RTNC  K Y+RWPV  G K   P LS      L HNHPV K  VDEVRRQ K LDTPTK+AC  LT   AGFKPAVQGKM++ALTGER N RAIQ                     DRRLLYV+M+K+  AAVSAGV+ VPP+ +RA+V TFE S+N AA ISSGQG VLGNPQAVRQPA RSQG R KSS EYGG  +RRRAQ
Sbjct:    1 MSLHLLLQECGGDDDGAGSDMDVCIENDGPPAPXXXXXXXXLAGSTSSSLGSSM--PQEYQAQGAGDDPDQPVDVAFXXXXXXXXXXXXXXXXLDSSPHSPSADVADGDGARPLCEAAEAHPALQERETPXXXXXXXXXXXXXXPEA---TPTAGSPEYSADAMAARLASIPLEGQSIEGVEAAVVGAFLEFGVEMKRCDSKKSSKEPGARLRLIGLACKHAMKNRQKEYREGDGANSGKRRKSNSRRTNCAVKGYIRWPVNVGNKHPDPILSFK---ELNHNHPVNKGVVDEVRRQTKPLDTPTKDACVKLTGKYAGFKPAVQGKMIQALTGERPNARAIQ---------------------DRRLLYVDMVKRTNAAVSAGVELVPPDTLRAIVETFESSLNAAARISSGQGVVLGNPQAVRQPAKRSQGARAKSSLEYGGARARRRAQ 422          
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Match: A0A6H5L482_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L482_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.830e-67
Identity = 148/265 (55.85%), Postives = 174/265 (65.66%), Query Frame = 0
Query:    1 MSLQQLLAECGGRDGG---TEACIAGSDXXXXXXXXXXXXXXGNDSPPVGSTSFPPQEHEAGDNSDHP--TMELGLDSSPSAQSKHGSEGVGARPLREAAEERQAQETPVTPTKVAGGAAAPAP-EASGPTPTAGRMEYTADAMAARLAVIPLEGKNVEEVAAAAVAACQEFGVEMRRFDSRKSSKEPGARMVLVGLACKHGMKNRQKEYLETEAANGIKRRKSSSQRTNCPCKFYVRWPVRGEKSEHPHLSMTGKCTLEHNHPV 259
            MSL  LL +CG  D      + CI GSD              G +S P G TS  PQE EA    D     M+  LD   +AQSK  S G G RPLREAAE+    ET  TP +  GGAA PAP EASG TPTAG   Y+A+A++ARLA+IPLEG +V++VAAA V ACQEFG  MRR DS+KS KE G R+V VGLACKH M NRQKEY + +AANG K+RKSSSQRTNC  K YVRWPV+G +S+HP+L+ T   TLEH+HPV
Sbjct:    1 MSLMDLLQDCGDDDDAGSDMDVCI-GSDPPAAVPAVFG----GTNSLPAGGTSLAPQEDEAQGAGDEARGAMDGTLDPITNAQSKTVSGGDGIRPLREAAEQG---ETSDTPQRAEGGAAGPAPPEASGRTPTAGSPAYSAEALSARLAIIPLEG-SVDDVAAAVVEACQEFGAVMRRCDSKKSKKEAGGRLVAVGLACKHAMPNRQKEYRQGDAANGAKKRKSSSQRTNCNMKVYVRWPVQGPRSDHPYLAFT---TLEHDHPV 253          
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Match: D7FLA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA8_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 8.900e-43
Identity = 123/366 (33.61%), Postives = 172/366 (46.99%), Query Frame = 0
Query:  125 TPTAGRMEYTADAMAARLAVIPLEGKNVEEVAAAAVAACQEFGVEMRRFDSRKSSKEPGARMVLVGLACKHGMKNRQKEYLETEAANGIKRRKSSSQRTNCPCKFYVRWPVRGEKSEHPHLSMTGKCTLEHNHPVQKDAVDEVRRQNKRLDTPTKEACEALTDAGFKPAVQGKMLEALTGERHNLRAIQNAAAAHARRKTPYDA---------NELLSK------------------------------------------------------DRRLLYVEMLKKATAAVSAGVQTVPPEAMRAVVRTFERSMNTAAMISSGQGAVLGNPQAVRQPAVRSQGTREKSSSEYG---GPASRRRAQNY 424
            +PT  +  Y+ADA+   L  IP + K++ ++ +A    C++ GV++    S  S +  G R+V   L C HGM  R+K        N  K R+S SQRT C CK  +RWP++ +  +HP L+      LEH H V K+A D  + Q   L TP KE    LTDAG KPA Q  ++EAL G R + R +       A  + P  A         +E LS+                                                      DRR LYV+ LK+ATAAVS GV+TVPPEA+RA+V+ F++ ++ A+ I S  G  + NP  VR P  R  G R+++S + G   G A R   Q Y
Sbjct:   71 SPTKEKWVYSADALKRDLGNIPTKEKDIPQLVSAVKDVCEQHGVKVSV--STSSKERGGGRVVATTLQCVHGMPQRKKP---ASTDNSTKSRRSDSQRTGCNCKINIRWPIKTDVHQHPRLTT---MDLEHLHTVDKEAADVQQAQKGPLTTPMKETAAKLTDAGLKPAAQAVVIEALHGRRVHPRTMSGQRGRRATTEWPEGAKPKWAVTKNHEALSEGEQQAPLVATGRLQCATDGDKGGGGAGGGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVQQFKQGVHQASRIGSSAGLAVANPAVVRPPTSRDTGKRKRASRKGGAVVGAARRTYNQTY 428          
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 3.250e-23
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 0
Query:  335 DRRLLYVEMLKKATAAVSAGVQTVPPEAMRAVVRTFERSMNTAAMISSGQGAVLGNPQAVRQPAVRSQ 402
            DRRLLYVEMLKKATAAVS+GVQ VPP+ MRA+V+TFE SMN AAMISSGQGAVLGNPQAVRQPAVRS+
Sbjct:  489 DRRLLYVEMLKKATAAVSSGVQLVPPDTMRAIVQTFESSMNAAAMISSGQGAVLGNPQAVRQPAVRSE 556          
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Match: A0A6H5JCK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK5_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 8.550e-15
Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  335 DRRLLYVEMLKKATAAVSAGVQTVPPEAMRAVVRTFERSMNTAAMISSGQGAVLGNPQAVRQPAVRSQGTREKSSSEYG---GPASRRRAQNY 424
            DRR LYV+ LK+ATAAVS GV+TVPPEA+RA+VR F++ ++ A+ I S  G  + NP  VR P  R  G R+++S E G   G A R   Q+Y
Sbjct:   36 DRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGGAVVGAARRAYNQSY 128          
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.360e-12
Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = 0
Query:  335 DRRLLYVEMLKKATAAVSAGVQTVPPEAMRAVVRTFERSMNTAAMISSGQGAVLGNPQAVRQPAVRSQGTREKSSSEYG---GPASRRRAQNY 424
            DRR LYV+ LK+ATAAVS GV+TVPPEA+RA+VR F++ ++ A+ I S  G  + NP  VR P  R  G R+++S E G   G A R   Q+Y
Sbjct:  781 DRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGGAVVGAARRAYNQSY 873          
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Match: A0A6H5JMX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX3_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.230e-12
Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = 0
Query:  335 DRRLLYVEMLKKATAAVSAGVQTVPPEAMRAVVRTFER-SMNTAAMISSGQGAVLGNPQAVRQPAVRSQGTREKSSSEYG---GPASRRRAQNY 424
            DRR LYV+ LK+ATAAVS GV+TVPPEA+RA+VR F++  ++ A+ I S  G  + NP  VR P  R  G R+++S E G   G A R   Q+Y
Sbjct:  135 DRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQXGVHQASRIGSSAGLAVANPAVVRLPTSRDTGKRKRASHEGGAVVGAARRAYNQSY 228          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JU34_9PHAE4.510e-12155.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L482_9PHAE1.830e-6755.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLA8_ECTSI8.900e-4333.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWW3_9PHAE3.250e-2386.76MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5JCK5_9PHAE8.550e-1550.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJG6_9PHAE1.360e-1250.54SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JMX3_9PHAE3.230e-1250.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1276657..1280683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16547.1mRNA_C-linearis_contig9.16547.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1276185..1280753 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16547.1 ID=prot_C-linearis_contig9.16547.1|Name=mRNA_C-linearis_contig9.16547.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=427bp
MSLQQLLAECGGRDGGTEACIAGSDTEVCIAGSDTEACIGNDSPPVGSTS
FPPQEHEAGDNSDHPTMELGLDSSPSAQSKHGSEGVGARPLREAAEERQA
QETPVTPTKVAGGAAAPAPEASGPTPTAGRMEYTADAMAARLAVIPLEGK
NVEEVAAAAVAACQEFGVEMRRFDSRKSSKEPGARMVLVGLACKHGMKNR
QKEYLETEAANGIKRRKSSSQRTNCPCKFYVRWPVRGEKSEHPHLSMTGK
CTLEHNHPVQKDAVDEVRRQNKRLDTPTKEACEALTDAGFKPAVQGKMLE
ALTGERHNLRAIQNAAAAHARRKTPYDANELLSKDRRLLYVEMLKKATAA
VSAGVQTVPPEAMRAVVRTFERSMNTAAMISSGQGAVLGNPQAVRQPAVR
SQGTREKSSSEYGGPASRRRAQNYNT*
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