prot_C-linearis_contig9.16524.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16524.1
Unique Nameprot_C-linearis_contig9.16524.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length680
Homology
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: D7FR51_ECTSI (DNA topoisomerase VI subunit B-like protein Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR51_ECTSI)

HSP 1 Score: 994 bits (2571), Expect = 0.000e+0
Identity = 533/647 (82.38%), Postives = 557/647 (86.09%), Query Frame = 0
Query:    1 SGEEVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMDNRDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKK------GRSKGDS--LYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYSTVKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRARESEE---GGVGYAGXXXXXXXXXXKGAAALDSKQITEKTLALGLSEAVNQHDAEAAKEESATAGRGMHVRE 636
            SGE VKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALP ISLTIEEFTE EFNEHRGMDNRDVVDAGLF+ SGGKKST+K +KA PKP  A A+  SAD      DP+  SAAA + AA    KEKK      GRSKGDS  LYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCS+D+KD P FLTKCVLDIDIYKNRPSVHEH KLPNPEGWRGTEMTVCVSGNW TYKSRVLQYLQQLAIITPYA+LELEYH+HANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHR                  CKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKM PS LTVKMVSRLTQML+DVKRFKPPDGACLSPAGEYNLR   VKEGVNVYRFANRIPLLFE GSDVVT+VA KRINWSSYK+DHKRDK+GVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCC  L+ HLL+RNALR+QKERKKVLTKYIPDVSR+VFGLLTAMQKRAR+ EE   GG G A           +  A+LDSK++TEKTLA GLS AVNQHDAEAAKEES  AGRG H R+
Sbjct:    5 SGEAVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPHISLTIEEFTEEEFNEHRGMDNRDVVDAGLFKASGGKKSTSKATKALPKP--AVAEEGSAD------DPQEPSAAAGATAADLDPKEKKAKNDKKGRSKGDSHSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSSDVKDPPNFLTKCVLDIDIYKNRPSVHEHVKLPNPEGWRGTEMTVCVSGNWQTYKSRVLQYLQQLAIITPYAELELEYHSHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRTK----------------CKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMQPSALTVKMVSRLTQMLRDVKRFKPPDGACLSPAGEYNLRQ--VKEGVNVYRFANRIPLLFEAGSDVVTRVAMKRINWSSYKVDHKRDKIGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCQQLRTHLLRRNALREQKERKKVLTKYIPDVSRAVFGLLTAMQKRARDGEEDKGGGAGGASKRARGATAKTQIMASLDSKEVTEKTLAAGLSAAVNQHDAEAAKEESVAAGRGTHSRQ 625          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: W7U7C7_9STRA (Dna topoisomerase 6 subunit b n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7C7_9STRA)

HSP 1 Score: 572 bits (1475), Expect = 3.100e-193
Identity = 312/602 (51.83%), Postives = 391/602 (64.95%), Query Frame = 0
Query:    3 EEVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMDNRDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYSTVKE------------------------------------GVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRAR 568
            E V+SK+PAEFF+++Q+I GFDN G+SLYTT+RELVEN+LDAAESI  LP +S+ IEE TE E NE RGM++R+ VD GLF  + GK+ +    +              A+     H         ++ AA   L  KK   +G   YYRV C+DNG GM H+KIPDMLG VLSSSKYGVRQ RGK+G+G+KMALIWSKKSTGLPI+V S  S +      +++ CVLDIDIY+N+P V  H K+ N +GWRGT + V V GNW TYK+ ++ Y QQLAIITPYA +E  +   +N  +++   Y RRSE MPP A EVKHHP S+N+L++QQLI R +T                K  + FL  +L+ + RPL+ RI+ ELG GF   M P ++      RLT MLK +  FK PDG+CLSPAGEYNLR   +KE                                    G+NVYRFANRIPLLFE G+DVVT+VA +RINW SYKID KRD++GVFVS VSTKIPFKGT KEYIGDDTE I+K+VK ALQ+CC  LK HLL RNA RD KERK+ L +Y+PDVSR++  +L ++ KR R
Sbjct:    8 EVVESKTPAEFFSEHQSICGFDNPGRSLYTTVRELVENALDAAESIQELPYVSVVIEEITEDELNELRGMESRERVDLGLFHKATGKRRSGGEIQEV-----------LAENMKELHSDALEKQMGQNSAA---LSNKKKGDRGARNYYRVTCEDNGCGMAHEKIPDMLGRVLSSSKYGVRQTRGKFGLGSKMALIWSKKSTGLPIEVRSAHSLEENHPAAYISHCVLDIDIYRNQPFVKLHEKVANIKGWRGTRIDVVVEGNWSTYKTHIMTYFQQLAIITPYAHMEFTFRTLSNASREVITQYARRSEHMPPPAQEVKHHPSSINHLIIQQLIKRTST----------------KTFLNFLCTELACVTRPLAARIVKELGNGFAENMVPEDIDANKTIRLTSMLKSISIFKLPDGSCLSPAGEYNLRLGIMKELHPDYVATVSEQAAAFEGHPFVVEAGVSLGGNALKDGINVYRFANRIPLLFEAGNDVVTQVANRRINWQSYKIDPKRDRIGVFVSIVSTKIPFKGTGKEYIGDDTEAIRKSVKSALQRCCKQLKQHLLTRNAARDVKERKRSLLRYMPDVSRAIAAVLNSINKRKR 579          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: A0A7S2XJE4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJE4_9STRA)

HSP 1 Score: 560 bits (1444), Expect = 1.640e-188
Identity = 323/627 (51.52%), Postives = 396/627 (63.16%), Query Frame = 0
Query:    3 EEVK-SKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGM----------DNRD-VVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPG-FLTKCVLDIDIYKNRPSVHEHAKLPNPEG--WRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAEL-----GEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRY------------------------------------STVKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRARESEEG 573
            EEV+ SKSPAEFFA+NQ IAGFDN GKSLYTT+REL+ENSLDA ES+  LP IS+TIEE T+++FN+ RG+          DN D + D  LF     K+ +  T  A+  P+                DP   S A E V +      KK R      Y+ +  +DNG GM H+ IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI + +    + +  PG F++KCVLDIDIYKNRP V EH+K PN     W GTE  V ++GNW TYKSRV+QYLQQLAIITPYA LEL Y N ++ K+     Y RRSEQMPP + EVKHHP SVNNLL+QQL+ R                  CK  + FL  +LSSI   L++R+IAEL        F   M+P+++T K ++ L QML+ V+ FK PDG+CLSP GEYNL                                      S  KEG+N+ RFANRIPLLFEGG+DV T+VA  +I WS YKIDHKRDK+ VFVS VSTK+PFKGT KEYIGDD  EI+ +VK ALQ CC  L+AHL KRNALRD++ER+  L KY PDVSRS+FG+L  M+KR  E  +G
Sbjct:   16 EEVQVSKSPAEFFAENQAIAGFDNMGKSLYTTLRELIENSLDACESVNVLPNISVTIEEMTQSQFNKVRGLKTSSSAENGFDNDDGIKDIDLFMKKSNKRKSKSTGGASEAPT----------------DPV--SGAPEEVGST-----KKKRKANAEAYFHITVRDNGCGMSHEAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPITITTAHMNNDQGTPGEFISKCVLDIDIYKNRPRVIEHSKQPNNSDSPWIGTEFQVLIAGNWTTYKSRVVQYLQQLAIITPYAMLELNYTNASDAKRSFGIRYERRSEQMPPPSKEVKHHPSSVNNLLIQQLLERSR----------------CKTFLKFLCTELSSISPSLAKRLIAELKGTQSDAEFDEDMSPADVTDKQITILVQMLRSVELFKAPDGSCLSPLGEYNLNLGIQKVIEPDLIATARDRPSAYEGHPFIVEAAVSLGGSDAKEGINIVRFANRIPLLFEGGADVATRVAQSKIKWSLYKIDHKRDKINVFVSIVSTKVPFKGTGKEYIGDDITEIQTSVKRALQSCCQQLRAHLTKRNALRDERERRSRLVKYAPDVSRSIFGILEVMRKRKEEDVDG 603          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: A0A6V2BFB6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BFB6_9STRA)

HSP 1 Score: 552 bits (1423), Expect = 2.030e-185
Identity = 312/615 (50.73%), Postives = 388/615 (63.09%), Query Frame = 0
Query:    6 KSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMDNRDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVS---GCSTDLKDAPGF-------LTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYST------------------------------------VKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRARESEEGG 574
            +SKSPAEFFA+NQ IAGFDN GKSLYTT+REL+ENSLDA ES+  LP+I L IEE ++++FN  RG+  +             K    +T   AP P         +D   TT   ++S+ + E+         KK     +S Y+ +  +DNG GM HD IP++LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ +   G S   +   G        ++ CVLDIDIYKNRP V EH K+PN EGW GT   V ++GNW TYKSR++QYLQQLAIITPYA+LE+ Y N  + KKD+   Y RRSEQMPP A EVKHHP SVNNLLVQQL+ R                  CK ++ FL  DLSS+   L++RII EL +     M+P+++  K ++R+ Q+L+   +FK PDG+CLSP GEYNL                                         KEG+ V RFANRIPLLFE G+DV T+VA  +I WSSYKIDHKRDK+GVFVS VSTK+PFKGT KEYIGDD  EI+ +VK ALQ CC  L+ HL KRNALRDQ+ER+  L KYIPDVSRS+FG+L  M+KR  +   GG
Sbjct:   36 QSKSPAEFFAENQAIAGFDNMGKSLYTTVRELIENSLDACESVNVLPDIQLNIEEMSQSQFNVLRGVTVK-------------KLGNNETGTNAPVPD-------DSDAMTTTQGQKSSNKSNET---------KKSNRSAES-YFLISVRDNGCGMAHDAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKIKTSHFGASDHKRHESGDDNRFGQEISTCVLDIDIYKNRPRVIEHTKVPNKEGWVGTLFEVLIAGNWTTYKSRIVQYLQQLAIITPYAKLEMRYSNRFDAKKDMAIRYDRRSEQMPPPAREVKHHPSSVNNLLVQQLLERSK----------------CKTILKFLSTDLSSVTPALAKRIIDELDDDLDESMSPADVNDKQITRIVQLLRGSDQFKSPDGSCLSPLGEYNLNLGIRKVIEPEVVATARDRPGAYEGHPFIVEAAVSLGGKGAKEGITVVRFANRIPLLFEAGADVATRVAQSKIKWSSYKIDHKRDKIGVFVSIVSTKVPFKGTGKEYIGDDITEIQLSVKRALQSCCQQLRTHLAKRNALRDQRERRSRLVKYIPDVSRSIFGILDTMRKRKLDEMNGG 604          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: A0A1E7FFR2_9STRA (Topo-VIb_trans-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFR2_9STRA)

HSP 1 Score: 540 bits (1392), Expect = 4.370e-181
Identity = 305/610 (50.00%), Postives = 380/610 (62.30%), Query Frame = 0
Query:    2 GEEVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMDNRDVVDAGLFQTSGGK--KSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYST------------------------------------VKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRARESEEG 573
            GE  + KSPAEFFADNQ IAGFDN GKSLYT+IRELVENSLDA ESIG LP I + IEE  + EFN+ RG+      D  LFQ  GGK   S    S A  K +     G +   S  T  P                  KK   +G   Y+++K KDNG GM H+KIPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ +  S  +         CVLDI+I  N P++ +H K  N   W GTE+ + ++GNW TY+SR++ Y QQLAIITPY QLEL Y N + P++++T  + RRSEQMPPL  E+KHHP SVNN++V QLI R                  CK ++ FL K+LS + RPL++RI+ E G      + PS++T + +++L Q+L+ VK FK PDG+CLSP GEYNL                                         K+G+NV RFANRIPLLFEGG+DV T+VA  +I WS YKID KRD++GVFVS VSTKIP+KGT KEYIGDD  EI  +VK A+Q CC  L+ HLLKRNALR+QK+R+  L KYIPDVSRS++ LL  M+KR  E   G
Sbjct:   15 GEIQRQKSPAEFFADNQAIAGFDNYGKSLYTSIRELVENSLDACESIGVLPTIQVYIEELNQDEFNKIRGISVA-TKDVELFQQKGGKGNSSAGAVSSAKKKKAGVNGSGGNDKDSKPTKTPR-----------------KKASQEG---YFQLKVKDNGCGMNHEKIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIKITTAHSVSI---------CVLDINITNNCPNIIQHTKSKNTTEWVGTELELLIAGNWTTYRSRIVSYFQQLAIITPYCQLELVYENRSEPQRNMTLRHDRRSEQMPPLPREIKHHPSSVNNIIVSQLIERSN----------------CKTIIDFLTKELSCVTRPLAQRIVTECGWDEDDIVNPSDMTSRQLTKLVQVLRTVKMFKAPDGSCLSPLGEYNLNLGIRKVLEPEFVATARDKPSAYEGHPFLVEAAVSLGGKEAKDGLNVVRFANRIPLLFEGGADVCTRVANNKIKWSLYKIDQKRDRIGVFVSIVSTKIPYKGTGKEYIGDDITEISVSVKKAIQSCCQQLRVHLLKRNALRNQKDRRSKLVKYIPDVSRSLYTLLDGMRKRREEHPSG 578          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: B8BZH3_THAPS (Topoisomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZH3_THAPS)

HSP 1 Score: 529 bits (1362), Expect = 2.520e-177
Identity = 327/672 (48.66%), Postives = 391/672 (58.18%), Query Frame = 0
Query:    6 KSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMDNRDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVKMVSRLTQMLKDVKR-FKPPDGACLSPAGEYNLRYST------------------------------------VKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRARESEEGGVGYAGXXXXXXXXXXKGAAALD---SKQITEKTLALGLSEAVNQHDAEAAKEESATAGRGMHVRED 637
            +SKSPAEFFA+NQ+IAGFDN GKSLYTT+RELVENSLDA ES+  LP+IS+ IEE T+ +FNE RG+            TSGG     K                  D S+     +A                KK R+ GD+ Y+ V  +DNG GM HD IPD+LG VLS SKYGVRQ RGK+G+GAKMALIWSKKSTG+PI++ +              K +  IDIYKN P + EH +  N E W GTEM V VSGNW TYKSRV+QYLQQLAIITPYA+LE+ Y N ++ KK +   + RRSEQMP  A EVKHHP SVNNLLVQQL+    +                K L+ FL  DLS I   +++R+I  LG+ F   M+P+E+  K ++RL Q+L+     FK PDG CLSP GEYNL                                         KEG+ V RFANRIPLLFEGG+DV T+VA  +I WSSYKIDHKRDK+GVFVS VSTK+PFKGT KEYIGDD  EI+ +VK ALQ CC  L+ HL KRNALRD KERK  L KYIPDVSRS+FG+L  M KR  E +                    +A +D   S  IT  T    L+EAV         EE+A AG G    ED
Sbjct:   15 QSKSPAEFFAENQSIAGFDNPGKSLYTTLRELVENSLDACESVDVLPDISVVIEEMTQDQFNEMRGV-----------PTSGGPGKKKK----------------GVDGSDDAAVGDAXXXXXXXXXXXXXXXAKKRRAGGDA-YFLVTVRDNGCGMAHDAIPDLLGRVLSGSKYGVRQTRGKFGLGAKMALIWSKKSTGVPIRIKTSH-----------VKGIYIIDIYKNCPRIIEHKQKDNTENWIGTEMQVLVSGNWTTYKSRVVQYLQQLAIITPYARLEMSYSNRSDEKKGMNLRFERRSEQMPSQAREVKHHPSSVNNLLVQQLLENSKS----------------KTLLKFLTGDLSGISPSVAKRLIERLGDAFEEDMSPAEMDDKQITRLVQLLRSTDDLFKSPDGGCLSPLGEYNLNLGIQKVVEPEIIATARDKPGAYDGHPFIVEAAVSLGGKEAKEGITVVRFANRIPLLFEGGADVATRVANSKIKWSSYKIDHKRDKIGVFVSIVSTKVPFKGTGKEYIGDDITEIQLSVKRALQNCCQQLRVHLAKRNALRDVKERKSRLLKYIPDVSRSLFGILEGMHKRKLEED--------------------SAIMDGIASGDITVDTFKQQLTEAV---------EENAHAGLGNDENED 602          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: A0A7S2S2M8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M8_9STRA)

HSP 1 Score: 529 bits (1363), Expect = 3.310e-176
Identity = 306/628 (48.73%), Postives = 386/628 (61.46%), Query Frame = 0
Query:    2 GEEVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMD---NRDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNH---------------------ANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTV--KMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRY-------------------------------------STVKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKR 566
            GE V+SKSPAEFFA+NQ IAGFDN GKSLYT+IRELVENSLDAAES+  LP+I LTI E +EA+FN  RG+    NR  ++     T  GK S +K   +         +GA    S                   A        S+   +YYRV CKDNG GMPH  IP+MLG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTGLPI+V S  + D  + P  +++CVLDIDI++N P V  H K  NP+GWRGTE+TV V GNW +Y+S+V+ Y QQLA+ITPYA L+L++++                      ++  ++L   Y RRS+Q+PPL  EVKHHP SV+NLL+QQL+ R  +                K LV FL +DL  +   ++ER+ AELG+     + P ++    K V+ +TQ+L+DV  FK PDG+CLSPAGEYNLR                                      S  KEG+ VYRFANRIPLLFE GSDV T+VA K+I W+SYKID K+D++GVFVS VSTKIPFKGTSKEYIG+D E + +AVK  LQ C   L+ HL++R   RD + RKK LTKYIPDVSRS+FG+L  +  R
Sbjct:    5 GESVRSKSPAEFFAENQIIAGFDNPGKSLYTSIRELVENSLDAAESLCVLPDIELTITELSEAQFNAQRGVKTAGNRGDLELFGSSTKKGKGSKSKEGGSVEAQDDGVEEGADLSQSLXXXXXXXXXXXXXXXXXXA-------GSRSQVMYYRVTCKDNGCGMPHQAIPEMLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGLPIEVRSAHTKDASEPPRSVSECVLDIDIHRNEPQVQRHTKQANPDGWRGTEITVTVGGNWTSYRSKVVSYFQQLAVITPYADLKLKFNSEGSSADGSTPLSPGLGVTESSTSSSARNLEVHYSRRSDQIPPLPSEVKHHPSSVDNLLIQQLLVRTKS----------------KSLVSFLQRDLQGVTSGVAERVAAELGDWAEDTL-PQDIATNNKRVNAITQVLRDVTLFKSPDGSCLSPAGEYNLRLGIQKEVAPDLVATHTMKRAAAHEGHSFLVEAGVSIGGSKAKEGITVYRFANRIPLLFEQGSDVTTRVANKKIKWASYKIDQKKDRIGVFVSIVSTKIPFKGTSKEYIGEDVEPLHEAVKKCLQACATQLRHHLMRREQQRDAQNRKKNLTKYIPDVSRSLFGVLNRVYTR 608          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: B7G6Z7_PHATC (Type II DNA topoisomerase 6 subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6Z7_PHATC)

HSP 1 Score: 523 bits (1348), Expect = 9.020e-175
Identity = 300/608 (49.34%), Postives = 379/608 (62.34%), Query Frame = 0
Query:    2 GEEVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMDN--RDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYST------------------------------------VKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRARESE 571
            GE    KSPAEFFA+NQ IAGFDN GKSLYT++RELVENSLDA ESI  LPEIS+ I+E+T+ EFN    M    R   D  LF+T        K  K  PK +    +  + + S                        KK +      Y+++  KDNG GM H  IP++LG VLS SKYGVRQ RGK+G+GAKMALIW+KKSTG PI++++    D   AP   + CVLDIDIYKN P + EH    N +GW GTEM+V ++GNW TYKSR++QYLQQLAIITPYA LEL Y N ++ K++L   Y RRS+QMPP A  +KHHP SVNNL++QQLI    T                + L  FL  +LS++  PL+ R++ ELG  F   M PS L  K ++RL Q+L+ V+ FK PDG+CLSP GEYNL                                        VKEG+ V RFANRIPLLFEGG+DV T+VA  +I WS+YK+D+KRD++GVFVS VSTK+PFKGTSKEYIGDD  EI+++VK ALQ CC  L+ +L KR+AL+D + RK  + KY+PDV RS+FG+L +M  RAR++E
Sbjct:   14 GEVQVQKSPAEFFAENQAIAGFDNLGKSLYTSLRELVENSLDACESIHELPEISIEIKEYTQEEFNALDVMKTSPRKKRDMQLFETK-------KKDKKPPKEATDVDEITTVENSG-----------------------KKRKKAPQDAYFKLTVKDNGCGMSHSAIPNLLGRVLSGSKYGVRQTRGKFGLGAKMALIWAKKSTGQPIRIMTSHRPDGGVAPERASACVLDIDIYKNAPRILEHTTRKNTDGWMGTEMSVLIAGNWTTYKSRIVQYLQQLAIITPYAVLELAYINISDSKRNLHVRYDRRSDQMPPPAKTIKHHPASVNNLVIQQLIQFTKT----------------RTLFKFLSTELSTVSPPLARRLVTELG--FDESMPPSSLEDKEITRLVQLLRQVQLFKAPDGSCLSPLGEYNLNLGIRKVLEPDLIATSRDKPGAYEGHPFLVEAAVSLGGKEVKEGITVIRFANRIPLLFEGGADVATRVANTKIRWSNYKMDYKRDRIGVFVSIVSTKVPFKGTSKEYIGDDATEIQQSVKRALQSCCQQLRGYLAKRSALKDAQTRKSRMAKYVPDVGRSLFGILDSM--RARQAE 571          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: A0A1Z5KK08_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK08_FISSO)

HSP 1 Score: 518 bits (1334), Expect = 1.080e-172
Identity = 301/606 (49.67%), Postives = 379/606 (62.54%), Query Frame = 0
Query:    8 KSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGM---DNRDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYS------------------------------------TVKEGVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQKRARESEEGG 574
            KSPAEFFA++Q IAGFDN GKSLYT+IRELVENSLDA ES   LPEIS+ + E+T+ EFN+  G+     ++  D  LF     KK+  KT K  P  S  T +    + S+T                      KK ++     Y+R+  +DNG GM H+ IP +LG VLS SKYGVRQ RGK+G+GAKMALIWSKKS+G P+++ +       D P   + CVLDIDI KN P + EH K  N + + GT M + ++GNW TY+SR++QY+QQLAIITPYA L+L+Y N + P+++L   Y+RRSEQMPP A  VKHHP SVNN++VQQLI  Q T                K LV FL  +L+S+   +++R+I EL E    +M P ELT   ++RL Q+LK V+ FK PDG+CLSP GEYNL                                       T+KEG+ V RFANRIPLLFE G+DV T+VA  +I WSSYKID KRDK+GV+VS VSTKIPFKGTSKEYIGDD  EI+++VK ALQ CC  LK HL+KR AL+D KER   L KYIPDVSRS+ G+L  M+KR  E +  G
Sbjct:   16 KSPAEFFAEHQAIAGFDNLGKSLYTSIRELVENSLDACESANILPEISVHVTEYTQKEFNKIAGLAESPRKNANDRELFH----KKT--KTPKKPPTESQLTQE---TNESST----------------------KKRKTASQDAYFRIVVQDNGCGMEHNAIPHLLGKVLSGSKYGVRQTRGKFGLGAKMALIWSKKSSGQPVRIQTAHRRSGTDIPTHCSVCVLDIDISKNEPIIMEHTKYVNKDNFIGTRMELLIAGNWTTYRSRIVQYIQQLAIITPYAYLQLDYENISEPQRNLQLQYQRRSEQMPPPAATVKHHPSSVNNIIVQQLI--QMTR--------------AKTLVKFLSTELASVSPAMAKRLIGELNE-VDEEMDPRELTDAHITRLVQLLKRVEIFKAPDGSCLSPLGEYNLNLGIQFVQKPDLIATARDKPAAYEGHPFLVEAAVSLGGKTMKEGITVVRFANRIPLLFESGADVSTRVANSKIKWSSYKIDFKRDKIGVYVSIVSTKIPFKGTSKEYIGDDATEIQQSVKRALQSCCQQLKVHLVKRTALKDAKERSNRLRKYIPDVSRSLHGILEGMRKRREEGDVNG 573          
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Match: A0A7S3LRB3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRB3_9STRA)

HSP 1 Score: 516 bits (1328), Expect = 1.720e-171
Identity = 299/685 (43.65%), Postives = 400/685 (58.39%), Query Frame = 0
Query:    3 EEVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGALPEISLTIEEFTEAEFNEHRGMDNRDVVDAGLFQTSGGKKSTAKTSKAAPKPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLYYRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWSKKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNPEGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPKKDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTGNPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAEL----GEGFHPKMAPSELTVKMVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYSTVKE------------------------------------GVNVYRFANRIPLLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSKEYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIPDVSRSVFGLLTAMQK-------RARESEEGGVGYAGXXXXXXXXXXKGAAALDSKQITEKTLALGLSEAVNQHDAEAAKEESATAGRGMHVREDIII 640
            +++K KSPAEFFA+NQNIAGFDN GK+LYTT+RELVENSLDAAESI  LPE+ L I E +   F++ +G+  +D VD  L++   GKK   K                                                +S+G   Y+++ CKDNG GM H++IPDM G VL+ SKYGV+QARGK+G+GAKMALIWSKKSTGLPI++ S  + +  ++  F+T C+LDIDI+KN P++  H K+PN E W G+E+ V +SGNW TYKSRVL Y++ LA+ITPYA   LE+    NPKK  T  YRRRSEQM  LA EVKHHP SV+NL+V+QL++                    K L   L  DL  I++PL++R+I EL     + F      S +  + V +LT ML D   F PPD  CLSPAGEYNLR   +K+                                    G+ +YRFANRIPLLFE G+D+V   A +R+ WSSYKI+HK DKVGVFVS VSTKIPFKGT KEYIGDD  E+ ++VK A+ +CCL LK+ L  R   RD   R + L KY+PD SR++FG+L+AM++       + R+ E+G +              +  + + S ++T+ +++  L EA+ Q D   A E++   GRG   R ++ +
Sbjct:   26 QKLKFKSPAEFFAENQNIAGFDNPGKALYTTVRELVENSLDAAESIRTLPEVHLKITELSNKSFSQAQGLSVQDRVDKALYR---GKKKGKKXXXXXXXXX---------------------------XXXXXXXXXANSKSQGSQKYFKLVCKDNGCGMKHERIPDMFGRVLAGSKYGVKQARGKFGLGAKMALIWSKKSTGLPIEIKSSHTNNPDESSDFITHCILDIDIHKNEPNIRVHEKVPNDEAWHGSEVAVTISGNWKTYKSRVLNYMELLAVITPYAHFTLEFICEDNPKKSFTMDYRRRSEQMCKLAKEVKHHPKSVDNLIVRQLLNMTKK----------------KTLEQCLCSDLQGINKPLAKRLIDELEQLTDQNFDRDTLCSRIDTRTVQQLTAMLNDTNVFAPPDSRCLSPAGEYNLRLGIMKQFQPDLVATYTSKPGSYNGHPFVVEAAVAFGGAKGKPGLTIYRFANRIPLLFEPGNDIVNIAANRRVKWSSYKINHKTDKVGVFVSIVSTKIPFKGTGKEYIGDDVTEMAESVKTAISRCCLQLKSKLTARRLERDHAARARNLAKYVPDCSRALFGVLSAMKEGYEANGAKRRKVEDGVI---------DKVKTEMISKMSSGEVTQASISSKLIEAIEQADHAMALEQATKRGRGQASRCNVHL 655          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16524.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR51_ECTSI0.000e+082.38DNA topoisomerase VI subunit B-like protein Topois... [more]
W7U7C7_9STRA3.100e-19351.83Dna topoisomerase 6 subunit b n=1 Tax=Nannochlorop... [more]
A0A7S2XJE4_9STRA1.640e-18851.52Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6V2BFB6_9STRA2.030e-18550.73Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1E7FFR2_9STRA4.370e-18150.00Topo-VIb_trans-domain-containing protein n=1 Tax=F... [more]
B8BZH3_THAPS2.520e-17748.66Topoisomerase n=1 Tax=Thalassiosira pseudonana Tax... [more]
A0A7S2S2M8_9STRA3.310e-17648.73Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
B7G6Z7_PHATC9.020e-17549.34Type II DNA topoisomerase 6 subunit n=1 Tax=Phaeod... [more]
A0A1Z5KK08_FISSO1.080e-17249.67Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3LRB3_9STRA1.720e-17143.65Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 433..590
e-value: 4.1E-45
score: 155.8
IPR015320DNA topoisomerase VI, subunit B, transducerPFAMPF09239Topo-VIb_transcoord: 437..541
e-value: 7.6E-34
score: 116.8
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 439..611
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 3..438
NoneNo IPR availablePRODOMPD013790coord: 418..553
e-value: 6.0E-47
score: 478.0
IPR005734DNA topoisomerase VI, subunit BPANTHERPTHR10871:SF4DNA TOPOISOMERASE 6 SUBUNIT Bcoord: 439..611
IPR005734DNA topoisomerase VI, subunit BPANTHERPTHR10871:SF4DNA TOPOISOMERASE 6 SUBUNIT Bcoord: 3..438
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 417..543
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 147..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1081327..1091883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16524.1mRNA_C-linearis_contig9.16524.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 1081327..1091883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16524.1 ID=prot_C-linearis_contig9.16524.1|Name=mRNA_C-linearis_contig9.16524.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=680bp
SGEEVKSKSPAEFFADNQNIAGFDNAGKSLYTTIRELVENSLDAAESIGA
LPEISLTIEEFTEAEFNEHRGMDNRDVVDAGLFQTSGGKKSTAKTSKAAP
KPSAATADGASADMSNTTHDPEASSAAAESVAAAAYLKEKKGRSKGDSLY
YRVKCKDNGVGMPHDKIPDMLGVVLSSSKYGVRQARGKYGMGAKMALIWS
KKSTGLPIQVVSGCSTDLKDAPGFLTKCVLDIDIYKNRPSVHEHAKLPNP
EGWRGTEMTVCVSGNWPTYKSRVLQYLQQLAIITPYAQLELEYHNHANPK
KDLTAVYRRRSEQMPPLAYEVKHHPGSVNNLLVQQLIHRQATHELSHRTG
NPRAPFFCKDLVGFLMKDLSSIDRPLSERIIAELGEGFHPKMAPSELTVK
MVSRLTQMLKDVKRFKPPDGACLSPAGEYNLRYSTVKEGVNVYRFANRIP
LLFEGGSDVVTKVAFKRINWSSYKIDHKRDKVGVFVSTVSTKIPFKGTSK
EYIGDDTEEIKKAVKHALQQCCLTLKAHLLKRNALRDQKERKKVLTKYIP
DVSRSVFGLLTAMQKRARESEEGGVGYAGAGSKSKSKKAKGAAALDSKQI
TEKTLALGLSEAVNQHDAEAAKEESATAGRGMHVREDIIISALPQGGTAA
PDGQGAFGPTVFNSEAKFSLRLLRAAFVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR015320TopoVI_B_transducer
IPR005734TopoVI_B
IPR020568Ribosomal_S5_D2-typ_fold
IPR036890HATPase_C_sf