prot_C-linearis_contig9.16465.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig9.16465.1
Unique Nameprot_C-linearis_contig9.16465.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1040
Homology
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Match: A0A6H5JN30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN30_9PHAE)

HSP 1 Score: 432 bits (1112), Expect = 1.040e-130
Identity = 476/1159 (41.07%), Postives = 544/1159 (46.94%), Query Frame = 0
Query:    1 MAGDASLGITPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPSDGKFERTPFFDAIIRRGLRTSTRFDAATLTEEEIEALGMHRDETLGFKLQIRHFRSNRKELPPQGRA----RKNPAAEAXXXXXXXXXXXXNNARIAAGVPNRPLPSNPCPPPGGGARGGARDVGANRTPPYAMEQQPWGPK--------AARSAGEAGWADDVRWHRGVKGNGGPAMDNGVGGG--------ERWAAWDA-NRW--NDPNAPAGDRDPHR--YGGHNAPPPQHAQGPLAPGPAQAPS--SAGVAAAHRSG--WDGPPAGRVW-GDVE--RRTGSAWHPSASAADGRGEG----FERMAPNGVGDGEGGARGSGFVGGRREQ--QSEADVRAGGGNGY----FHQSPXXXXXXXXXXXXXXXXXXXXXVANGT--PPGFMHGAVGIDGPVRGGSPDSSSPGAPGAGGNGSLLHQGYRRLAAMADQRAAAARDGGGQLDTVLNQVHHQQHSPA------------------RPALPHQYEGP-GETDL---KRSAASVM---SNGRGPPGVTGSGR-GEPGLGHXXXXXXXXXQFSSRPLFTPSGGEDGPAKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNERRAHAG---RAWQRGAEASPAP--------HGDILATELAESERQVLSARVALDMAHARYEEASRSHNAKREEVNAAVAAAGQNHRFMAEAIAAXXXXXXXKGEEREDC-----ASLHSLARSCEAAAASETDXXXXXXXASRTPNGGEHPDGGRAARTGEPTAAXXXXXXXXXXXXXXSPEDRRNGDV-------------RRYSAASGGGGRRPEVPGRSSSTESI------------TMPRKSSLSVSAIDCADEMREVKLEAALLCGIGRAP------------------PRRAVADASADSKSLAAAGSSSFSPFSVGKRRFGRGGLQ-RSSSSSPGGAGGRSHMSRTSSAPHLPALRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLPSMGQMPGSPSASGETDSDHSDSMGGAGGDDNATATAIAPKQHQRPSPGSDGCNRGPGMMKTPS--AAGRESWGVYPGRDGGGGRHVAPLASLAA 1027
            MAGDASLGITPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPSDGKFERTPFFDAIIRRGLR STRFDAATLTE+EIEALGMHRDETLGFKLQIRHFRS+RKELPPQGR     RK P A   XXXXXXXXXXX          +   PS    P                          WG          A   +G+  WAD+ RWH                          ERWAAWD  NRW   +  + A   D HR  + GH  PP       L PG  QAPS  +AGV A+ RS   W+G P G  W GD    R+ GS WHPS  A+ G GE     ++R A +G+G+G G AR   F G RR+Q  Q E DV            FH SP                     V       P F HGAVG+D P                   GSLL QGYRRLAAMAD++AA A   GGQLD    +     H PA                  RP LPH+Y+    E D    KRSA+S++   S+GR P G +  G  G P  G          Q S  P F+   G   PA K+                  XXXXXXXXX       NER  H      +W RGA     P          D+LA EL ESER++LS+RVA+D+A ARYEEASR+H+AKRE+V                    XXXXXXX             AS HSLARS E AA  ET        A        H     AA  G  + +                E+ RNGD              RR  AASG   R  E  GRS S E++            + P  S+   +  DCADEM EVKLEAALLCG+GRAP                  P+   A A    + ++ A               G  G+  RSSSSSPGG   R  +S  + +P LP+L                          XXXXXX    +MGQ PGSPSA GETDSDHS   G A  +D A +     +QH           +GP + +      AGR SW  Y   DGGG R   PLA   A
Sbjct:    1 MAGDASLGITPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPSDGKFERTPFFDAIIRRGLRNSTRFDAATLTEDEIEALGMHRDETLGFKLQIRHFRSSRKELPPQGRGGGAVRKAPLAPLPXXXXXXXXXXXXXXXXXXXXRHLLPPS--IAPXXXXXXXXXXXXXXXXXXXXXXXXLSWGAAEAVAVAAAAGHPSGDLRWADEARWHHAXXXXXXXXXXXXXXXXXXXXXXXXERWAAWDGGNRWMPGEEGSGANVSDGHRLRHTGHATPP-------LLPGLVQAPSPAAAGVTASRRSAAIWEGAPHGGGWVGDPADMRQQGSLWHPSGGAS-GAGEXXXXXYDRTAHSGMGEGAGVARV--FAGNRRQQHQQPEVDVXXXXXXXXXXLRFHPSPLSAVEHHQRHGPSTRTAAPRVVGGSAVPAPSFRHGAVGVD-PXXXXXXXXXXXXXXXXXXXGSLLFQGYRRLAAMADEQAATA--AGGQLDLTGGRRRGGAHPPAPAPAAVLNRPLLNHSPIGRPLLPHEYDAAVAERDTDHHKRSASSLVGAGSSGRDPAGCSPLGETGGPRPG----------QASREPPFSSLAGGGDPAAKRRRSSVDEGDLPFGGVMQQXXXXXXXXXVRGRSTSNERLPHGNGNAASWTRGASGLGMPPPPATALVRDDVLARELEESERELLSSRVAVDLAQARYEEASRTHHAKREQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATLKGGASRHSLARSSEVAA--ETSAPNARATAGAGTGDSRH----SAANDGRGSGS----------------EEGRNGDADAAFHHRNSLPLGRRSPAASGRSERPSESYGRSPSLEALGAGPASPVGKVSSSPSPSAAGQAQPDCADEMMEVKLEAALLCGMGRAPVSSRRLGSAAAGAAVTPSPKAVTAGAEKGLEIVSLAAXXXXXXXXXXXXXDGNVGVPPRSSSSSPGGI--RRDLSERTHSP-LPSL-------------------PWKGHHNXXXXXXXXRSAMGQAPGSPSACGETDSDHSSDRGCAAVEDLAWSKK---QQHHE--------LQGPVVPRAVGRGGAGRLSWADY--GDGGGDRRALPLAKRTA 1077          
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Match: D7G2W4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W4_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 8.340e-35
Identity = 291/878 (33.14%), Postives = 353/878 (40.21%), Query Frame = 0
Query:  242 ERWAAWDA-NRW----NDPNAPAGDRDPHRYGGHNAPPPQHAQGPLAPGPAQAPS---SAGVAAAHRSG--WDGPPAGRVW----GDVERRTGSAWHPS---ASAADGRGEGFERMAPNGVGDGEGGARGSGFVGGRREQ--QSEADVRAGGGNGY--FHQSPXXXXXXXXXXXXXXXXXXXXXVANGTPPGFMHGAVGID---GPVRGGSPDSSSPGAPGAGGNGSLLHQGYRRLAAMADQRAAAARDGGGQLDTVLNQ-----------------VHHQ---QHSP-ARPALPHQYEGPGETDL---KRSAASVMSNGRGPPGVTGSGRGEPGLGHXXXXXXXXXQFSSRPL-FTPSGGEDGPAKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNERRAH---AGRAWQRGAEASPAP--------HGDILATELAESERQVLSARVALDMAHARYEEASRSHNAKREEVNAAVAAAGQNHRFMAEAIAAXXXXXXXKGEEREDCASLHSLARSCEAAAASETDXXXXXXXASRTPNGGEHPDGGRAARTGEPTAAXXXXXXXXXXXXXXSPEDRRNGDVRRYSAASGGGGRRPEVPGRSSSTESITMPRKSSLSVSAIDCADEMREVKLEAALLCGIGRAP-PRRAVADASADS------KSLAAAGSSSFSPFSVGKRRFG-------------------------RGGLQRSSSSSPGGAGGRSHMSRTSSAPHLPALRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLPSMGQMPGSPSASGETDSDHSDSMGGAGGDDNATATAIAPKQHQRPSPGSDGCNRGPGMMKTPSAAGRESWGVYPGRDGGGGRHVAPLASLAA 1027
            ERWAAWD  NRW        A A D   HR+ GH  PP       L PG AQAPS   +AG+ A+ RS   W+G P G  W     D+ R+ GS+WHPS   + AA+GRG+G+ERMA +G+G+G G AR + F G RR Q  Q E DVR         FH S                       +  + PGF HGAV +D     V G S D SS           LL QGYRRLAAMAD                                    V H+    HSP  RP LPH+Y+   E +    KRSA+S++  G G       GR   G            +  SR L F+   G DGPA K+                  XXXXXX          NER  H   +  +W  GA  S  P        + D+LA E  ESER++LS+RVA+D+A AR+EEASR+H+AKRE+V                    XXXXXXX     +  AS+HS ARS E AA +            R                   + A              SP                                               DCADEM EVKLEAALLCG+GRAP   R +A A+A +      K+++A         S+                               RGG++R  S        R+H    S  P LP  + G   XXXXXXXXXXXXX                 +MGQ PGSPSA GETDSDHS   G A  +D A +      + QRP        R  G       AGR SW  Y   D GG R   PLA L A
Sbjct:   13 ERWAAWDGGNRWMPGEEGAGANADDGHRHRHAGHATPP-------LLPGLAQAPSPAAAAGLTASRRSAAVWEGAPHGGGWVGGPADI-RQQGSSWHPSGGASGAAEGRGQGYERMAHSGIGEGAGVARDA-FAGDRRHQHQQPEVDVRGXXXXXXLRFHPSAVEHQQHHAGPSARTAAPRVIGGSAVSAPGFRHGAVSVDPAPAAVGGTSADPSS-----VXXXXGLLSQGYRRLAAMADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLHRPPLHHSPIGRPPLPHEYDAVAERETGHHKRSASSLVGAGSG-------GRDPAGYSPLGERAGPRHRQVSRELPFSSLAGGDGPATKRRRPSVDGGDRPLGGVIQQXXXXXXVRGRSTS---NERLTHGNGSAASWPSGASGSGTPLPPAAALVYDDVLAREFEESERELLSSRVAVDLAQARFEEASRTHHAKREQV-LXXXXXXXXXXXXXXXXXXXXXXXXXXTPTLKGGASVHSPARSSEVAAETSAPTGRAAAAGGRHGXXXXXXXXXXXXXHNSDSTAAFHHRRDSAPLGRRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDCADEMMEVKLEAALLCGMGRAPVSSRQLASAAAGAAVTPSPKAVSAGAEKGLEIVSLAXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXRGGIRRDLSE-------RTH----SPLPSLP-WKGGHNHXXXXXXXXXXXXXRS---------------AMGQAPGSPSACGETDSDHSSDRGCAAIEDLAGSKKQQHHELQRPV-----VPRAVGR----GGAGRLSWTDY--GDAGGDRRAPPLAKLTA 827          
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Match: A0A836CGN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.030e-23
Identity = 57/113 (50.44%), Postives = 74/113 (65.49%), Query Frame = 0
Query:   10 TPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPSDGKFERTPFFDAIIRRGLRTSTRFDAATLTEEEIEALGMHRDETLGFKLQIRHF 122
            TP+ K+N+ERS YRWL+ RHP QFE    T  +L+ A  ARKAF+ CGW  A++LIR  +G++ERT FFD II RGL+ STRF    LT  E +AL + +    G K  + HF
Sbjct:    3 TPIKKYNYERSAYRWLLARHPKQFEARGVTTTVLERAPAARKAFWTCGWPGAQLLIRCVEGRYERTVFFDTIIARGLQLSTRFAYPHLTPAESDALQIRQS---GAKHYLSHF 112          
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Match: A0A835Z9J0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J0_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.700e-20
Identity = 52/118 (44.07%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    5 ASLGITPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPSDGKFERTPFFDAIIRRGLRTSTRFDAATLTEEEIEALGMHRDETLGFKLQIRHF 122
            AS   TP+ ++N+ERS YRWL+ RHP QFE+   T+  L+ A  ARKA +   W+ +K L+R  +G++ERT FFD  I+RGL   TRF    LT +E + LG+  D T   K+ + H+
Sbjct:    2 ASAASTPIKRYNYERSAYRWLLQRHPRQFEKEGLTSTALERAPVARKALFHTSWSGSKKLVRCVEGRYERTVFFDTFIKRGLGFGTRFAIEHLTPQERQILGICEDPT--GKVYLAHY 117          
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Match: A0A836C9L8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.010e-20
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   10 TPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRP-SDGKFERTPFFDAIIRRGLRTSTRFDAATLTEEEIEALGMHRDETL 113
            +P+ K+N+ERS YRWL+ RH   F R   T + L+SASRAR+AF++ GW  A++LIR  S G+ ERTP F+ II+RGL   TRFD  T++  E   LG+  D TL
Sbjct:  336 SPIQKYNYERSTYRWLMARHADIFARCGITTKTLESASRARQAFHQSGWEGARMLIRADSQGRHERTPLFETIIKRGLSKGTRFDIDTISAREQATLGITFDSTL 440          
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Match: A0A835YVN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN4_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.270e-18
Identity = 52/104 (50.00%), Postives = 71/104 (68.27%), Query Frame = 0
Query:   10 TPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIR-PSDGKFERTPFFDAIIRRGLR--TSTRFDAATLTEEEIEALGMHRD 110
            +P  K+N+ERS YRWL+ R+   FE    T + L+SA RAR+AFY  GW  A+ LI+  S G+ ERTPFF+AII+RG+R  +  RFD A LT  E+ +LG+ R+
Sbjct:    4 SPTQKYNYERSMYRWLMARNSEAFETCGITTKTLESAKRAREAFYGSGWPGARYLIQVDSSGRHERTPFFEAIIQRGIRHQSGCRFDGAALTAGELTSLGIVRN 107          
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Match: A0A6H5L3C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C0_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.810e-17
Identity = 52/106 (49.06%), Postives = 64/106 (60.38%), Query Frame = 0
Query:   11 PVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRP-SDGKFERTPFFDAIIRRGL-RTSTRFDAATLTEEEIEALGMHRDETLG 114
            P+ K+N+ERS YRWLV+RHP  FE    T + L+ A  AR+AFY  GW  AKVL++   D KFERT FFD II RGL    TRF    +  +E   LG+  D   G
Sbjct:    7 PIKKYNYERSLYRWLVSRHPEPFEEHGITTKTLERAPLAREAFYRSGWLGAKVLVQNHEDNKFERTNFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATG 112          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JN30_9PHAE1.040e-13041.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2W4_ECTSI8.340e-3533.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGN8_9STRA1.030e-2350.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9J0_9STRA3.700e-2044.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9L8_9STRA5.010e-2050.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVN4_9STRA2.270e-1850.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L3C0_9PHAE3.810e-1749.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:243469..252043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16465.1mRNA_C-linearis_contig9.16465.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig9 243218..252130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig9.16465.1 ID=prot_C-linearis_contig9.16465.1|Name=mRNA_C-linearis_contig9.16465.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1040bp
MAGDASLGITPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRAR
KAFYECGWAEAKVLIRPSDGKFERTPFFDAIIRRGLRTSTRFDAATLTEE
EIEALGMHRDETLGFKLQIRHFRSNRKELPPQGRARKNPAAEAAAAAAAA
AAAAANNARIAAGVPNRPLPSNPCPPPGGGARGGARDVGANRTPPYAMEQ
QPWGPKAARSAGEAGWADDVRWHRGVKGNGGPAMDNGVGGGERWAAWDAN
RWNDPNAPAGDRDPHRYGGHNAPPPQHAQGPLAPGPAQAPSSAGVAAAHR
SGWDGPPAGRVWGDVERRTGSAWHPSASAADGRGEGFERMAPNGVGDGEG
GARGSGFVGGRREQQSEADVRAGGGNGYFHQSPMEKQQQHARVPPGGGVV
GGGGVANGTPPGFMHGAVGIDGPVRGGSPDSSSPGAPGAGGNGSLLHQGY
RRLAAMADQRAAAARDGGGQLDTVLNQVHHQQHSPARPALPHQYEGPGET
DLKRSAASVMSNGRGPPGVTGSGRGEPGLGHGHGHGHGHGQFSSRPLFTP
SGGEDGPAKKKRRPSMDGGERVNNGGLPPQQQQADASANGGRSSSNERRA
HAGRAWQRGAEASPAPHGDILATELAESERQVLSARVALDMAHARYEEAS
RSHNAKREEVNAAVAAAGQNHRFMAEAIAASQQQQQRKGEEREDCASLHS
LARSCEAAAASETDTAPSPAPASRTPNGGEHPDGGRAARTGEPTAAAAAA
TSDGNGNGNGSPEDRRNGDVRRYSAASGGGGRRPEVPGRSSSTESITMPR
KSSLSVSAIDCADEMREVKLEAALLCGIGRAPPRRAVADASADSKSLAAA
GSSSFSPFSVGKRRFGRGGLQRSSSSSPGGAGGRSHMSRTSSAPHLPALR
NGGGDGGGAFLPPALSGHPAAAAAANRGGGGNRLPSMGQMPGSPSASGET
DSDHSDSMGGAGGDDNATATAIAPKQHQRPSPGSDGCNRGPGMMKTPSAA
GRESWGVYPGRDGGGGRHVAPLASLAAASVRGGNGLSCA*
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