prot_C-linearis_contig89.16432.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16432.1
Unique Nameprot_C-linearis_contig89.16432.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length213
Homology
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: D7FVA7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA7_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.370e-101
Identity = 180/219 (82.19%), Postives = 192/219 (87.67%), Query Frame = 0
Query:    1 MKRAIATLMGGLMASEAFVLPAAVSRVLSSGSXXXXXXXXXXXXXXXXQGGVQHNR-------MAFLNKAGLAAAATVAAVTSTPMVANAEDADDGVKVGEEVTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAVQP 212
            MKRAIATLMGGLMASEAFVLPAAVSR L++  XXXXXXXXXXXXXXXX               +AFL+KAGLAAA TVAAVT +P++A AE+ D+ VKVGEEVTTDSGLKYTVTVAGKG+KPSPGNM+KAHYTGWLN FGDE+  KFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQI VPPQLGYGSRGAGGVIPPNATLYFDVELLAVQP
Sbjct:    1 MKRAIATLMGGLMASEAFVLPAAVSRGLAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAFLHKAGLAAATTVAAVTGSPLLARAEEEDE-VKVGEEVTTDSGLKYTVTVAGKGSKPSPGNMVKAHYTGWLNAFGDEDGAKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQITVPPQLGYGSRGAGGVIPPNATLYFDVELLAVQP 218          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: A0A835ZFS8_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS8_9STRA)

HSP 1 Score: 187 bits (476), Expect = 5.720e-57
Identity = 97/158 (61.39%), Postives = 118/158 (74.68%), Query Frame = 0
Query:   55 NRMAFLNKAGLAAAATVAAVTSTPMVANAEDADDGVKVGEE-VTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEE-SVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAV 210
            +R + ++KA +AA A        P  A AEDA   V V  + +TT++GL+Y V   G GA+P P + +KAHYTGWL GFGDE+ SVKFDSSRDRGRPF+FK G GQVIKAWDE++L M++GERR I+VPP LGYG RGAGGVIP NATLYFDVELL +
Sbjct:   38 SRRSLMDKAAVAAVAAAGMFNVAP--AQAEDAPAAVDVHADFITTETGLRYKVIKEGTGAQPPPSSNVKAHYTGWLGGFGDEDASVKFDSSRDRGRPFTFKAGVGQVIKAWDESVLAMKVGERRLIIVPPDLGYGKRGAGGVIPANATLYFDVELLGI 193          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: A0A7S3PZM0_9STRA (Peptidylprolyl isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZM0_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.030e-56
Identity = 97/159 (61.01%), Postives = 119/159 (74.84%), Query Frame = 0
Query:   55 NRMAFLNK----AGLAAAATVAAVTSTPMVANAEDADDGVKVGEEVTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLA 209
            +R +FLNK    A  AAAA +AAV+  P  A A+D+D      +  TT+SGLKY VT  G GA+P P   +KAHYTGWL+GF  E+  KFDSSRDRGRPFSFKVG GQVI+ WDE+ LDM++GERR +++PP+LGYG RGAGG+IP  ATLYFDVELL+
Sbjct:   47 SRRSFLNKGAITASTAAAAGIAAVSIAPKAALADDSDP---YADYTTTESGLKYLVTKEGTGAQPVPNTNVKAHYTGWLDGFQSEK--KFDSSRDRGRPFSFKVGAGQVIRGWDESFLDMKVGERRNVIIPPRLGYGDRGAGGLIPGGATLYFDVELLS 200          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: A0A6S8ZS26_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZS26_9STRA)

HSP 1 Score: 177 bits (449), Expect = 6.360e-53
Identity = 91/155 (58.71%), Postives = 110/155 (70.97%), Query Frame = 0
Query:   56 RMAFLNKAGLAAAATVAAVTSTPMVANAEDADDGVKVGEEVTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAV 210
            R  FLN A   AA T + +    ++  A  ADD     +  TT+SGLKY VT  G GA P+ G  +KAHYTGWL+GF  +   KFDSSRDRGRPFSFKVG GQVI+ WDE+   M++GERRQ+++PP+LGYG RGAGGVIP  ATLYFDVELLA+
Sbjct:   41 RRGFLNSA---AATTSSVIIGNAVLPQAAIADDTDPYADFTTTESGLKYKVTKEGDGAIPAAGQTVKAHYTGWLDGF--DSIRKFDSSRDRGRPFSFKVGAGQVIRGWDESFASMKVGERRQVIIPPRLGYGDRGAGGVIPGGATLYFDVELLAI 190          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: A0A7S2YE37_9STRA (Peptidylprolyl isomerase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YE37_9STRA)

HSP 1 Score: 175 bits (444), Expect = 2.920e-52
Identity = 93/156 (59.62%), Postives = 113/156 (72.44%), Query Frame = 0
Query:   56 RMAFLNKAGLAAAATVAAVTSTPMVANAEDADDGVKVGEE-VTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAV 210
            R AF+++    A  T +A+ S P V +AED       GE+ VTT+SGLKY V   G GA P PG M+KAHYTGWL+ F  +   KFDSSRDRGRPFSFKVG GQVI+ WDE+   M++GERRQI++PP+LGYG RGAGG+IP  ATLYFDVELL +
Sbjct:   36 RRAFIHQVASTALVTGSALLS-PQVTHAEDGS-----GEDWVTTESGLKYKVLKEGTGAVPEPGQMVKAHYTGWLDDF--DSPKKFDSSRDRGRPFSFKVGAGQVIRGWDESFSSMKVGERRQIILPPRLGYGDRGAGGIIPGGATLYFDVELLNI 183          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: A0A6U0I9I6_9STRA (Peptidylprolyl isomerase n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0I9I6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 7.570e-52
Identity = 94/163 (57.67%), Postives = 113/163 (69.33%), Query Frame = 0
Query:   50 GGVQHNRMAFLNKAGLAAAATVAAVTSTPMVA-NAEDADDGVKVGEEVTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAVQ 211
            G +   R AFL      AAATVA+V  +  V      AD+G     E T++SGLKY VT  G GA P  G  +KAHYTGWL+GF  E   KFDSSRDRGRPFSF+VG GQVI+ WDE+   M++GERRQ+++P +LGYG RGAGG+IP  ATLYFDVELLA+Q
Sbjct:   22 GSLPSGRRAFLQTGAATAAATVASVAVSGGVGVQPAFADEGDYADFE-TSESGLKYKVTKEGTGAIPEAGQTVKAHYTGWLDGF--ESIKKFDSSRDRGRPFSFRVGAGQVIRGWDESFASMKVGERRQVIIPARLGYGDRGAGGIIPGGATLYFDVELLAIQ 181          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: B7FWT8_PHATC (Peptidylprolyl isomerase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWT8_PHATC)

HSP 1 Score: 169 bits (427), Expect = 7.750e-50
Identity = 89/156 (57.05%), Postives = 108/156 (69.23%), Query Frame = 0
Query:   55 NRMAFLNKAGLAAAATVAAVTSTPMVANAEDADDGVKVGEEVTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAV 210
            +R  FL++   A+ + VAA    P VA A+  D      + +TT+SGLKY VT  G GA P PG  +KAHYTGWL GF  E   KFDSSRDR RPF F+VG GQVI+ WDE+   M +GERRQI++PP+LGYG RGAGG+IP  ATLYFDVELL +
Sbjct:   26 DRRTFLSQTAAASVSLVAA----PGVAKADGQDT---YSDFITTESGLKYKVTKEGTGAVPEPGQTVKAHYTGWLEGF--ESPKKFDSSRDRNRPFQFRVGAGQVIRGWDESFGAMAVGERRQIIIPPRLGYGDRGAGGIIPGGATLYFDVELLGL 172          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: K0T418_THAOC (Peptidylprolyl isomerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T418_THAOC)

HSP 1 Score: 182 bits (461), Expect = 1.460e-49
Identity = 92/158 (58.23%), Postives = 114/158 (72.15%), Query Frame = 0
Query:   53 QHNRMAFLNKAGLAAAATVAAVTSTPMVANAEDADDGVKVGEEVTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAV 210
            +H+R  FL K+   AA T +     P +A A+D        + +TTDSG+KY VT  G GA PSPG ++KAHYTGWL+ F  E+  KFDSSRDRGRPF FKVG GQVI+ WDE+   M++GERRQI++PP+L YG RGAGGVIPPN+TLYFDVELL +
Sbjct:   26 RHDRRDFLAKSS--AAVTASVFGGLPQIAKADD--------DFITTDSGMKYKVTKEGDGAIPSPGQLVKAHYTGWLDSFDSEK--KFDSSRDRGRPFQFKVGQGQVIRGWDESFSTMKVGERRQIILPPRLAYGERGAGGVIPPNSTLYFDVELLGI 171          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: A0A7S2R5E6_9STRA (Peptidylprolyl isomerase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R5E6_9STRA)

HSP 1 Score: 166 bits (421), Expect = 9.950e-49
Identity = 88/156 (56.41%), Postives = 109/156 (69.87%), Query Frame = 0
Query:   56 RMAFLNKAGLAAA-ATVAAVTSTPMVANAEDADDGVKVGEEVTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAV 210
            R AFL    +AA+ A VA V   P+   A D        +  TT+SGL++ VT  G G  P  G  +KAHYTGWL+GF  E+  KFDSSRDRGRPFSFKVG GQVI+ WDE+   M++GE+RQ+++PP+LGYG RGAGGVIP  ATLYFD+ELLA+
Sbjct:   38 RRAFLQNGAVAASTALVAGVGRAPIALAASDDP----YADFETTESGLRFKVTKEGTGETPPAGTTVKAHYTGWLDGFDSEK--KFDSSRDRGRPFSFKVGAGQVIRGWDESFSVMKVGEKRQVIIPPRLGYGDRGAGGVIPGGATLYFDMELLAI 187          
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Match: K9U471_CHRTP (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Chroococcidiopsis TaxID=54298 RepID=K9U471_CHRTP)

HSP 1 Score: 164 bits (416), Expect = 4.720e-48
Identity = 80/116 (68.97%), Postives = 90/116 (77.59%), Query Frame = 0
Query:   96 VTTDSGLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPFSFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNATLYFDVELLAVQ 211
            +TTDSGLKYTV   G G  P  G  +  HYTG L     E+  KFDSSRDRG+PFSFKVGTGQVIK WDEA+  M++GERRQIV+PP+LGYG+RGAGGVIPPNATL FDVELL V 
Sbjct:   72 ITTDSGLKYTVLQEGSGEMPKKGQTVVVHYTGTL-----EDGSKFDSSRDRGQPFSFKVGTGQVIKGWDEALSTMKVGERRQIVIPPELGYGARGAGGVIPPNATLIFDVELLKVN 182          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA7_ECTSI1.370e-10182.19Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
A0A835ZFS8_9STRA5.720e-5761.39Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S3PZM0_9STRA2.030e-5661.01Peptidylprolyl isomerase n=1 Tax=Chaetoceros debil... [more]
A0A6S8ZS26_9STRA6.360e-5358.71Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S2YE37_9STRA2.920e-5259.62Peptidylprolyl isomerase n=2 Tax=Amphiprora paludo... [more]
A0A6U0I9I6_9STRA7.570e-5257.67Peptidylprolyl isomerase n=1 Tax=Minutocellus poly... [more]
B7FWT8_PHATC7.750e-5057.05Peptidylprolyl isomerase n=3 Tax=Phaeodactylum tri... [more]
K0T418_THAOC1.460e-4958.23Peptidylprolyl isomerase n=1 Tax=Thalassiosira oce... [more]
A0A7S2R5E6_9STRA9.950e-4956.41Peptidylprolyl isomerase n=1 Tax=Eucampia antarcti... [more]
K9U471_CHRTP4.720e-4868.97Peptidyl-prolyl cis-trans isomerase n=4 Tax=Chrooc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.40coord: 76..212
e-value: 9.2E-46
score: 157.3
NoneNo IPR availablePANTHERPTHR10516:SF416coord: 39..208
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..212
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.512
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 82..211
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 114..208
e-value: 4.4E-31
score: 107.1
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 118..211
score: 29.546
IPR023566Peptidyl-prolyl cis-trans isomerase, FKBP-typePANTHERPTHR10516PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 39..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:603367..605826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16432.1mRNA_C-linearis_contig89.16432.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 603316..606522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16432.1 ID=prot_C-linearis_contig89.16432.1|Name=mRNA_C-linearis_contig89.16432.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=213bp
MKRAIATLMGGLMASEAFVLPAAVSRVLSSGSSSSRKVITCSASSSSSQG
GVQHNRMAFLNKAGLAAAATVAAVTSTPMVANAEDADDGVKVGEEVTTDS
GLKYTVTVAGKGAKPSPGNMIKAHYTGWLNGFGDEESVKFDSSRDRGRPF
SFKVGTGQVIKAWDEAMLDMRIGERRQIVVPPQLGYGSRGAGGVIPPNAT
LYFDVELLAVQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
IPR023566PPIase_FKBP