prot_C-linearis_contig89.16427.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16427.1
Unique Nameprot_C-linearis_contig89.16427.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length835
Homology
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A6H5L7J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J5_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 6.650e-97
Identity = 370/874 (42.33%), Postives = 442/874 (50.57%), Query Frame = 0
Query:    1 MLGERSYDEKRQTLDYLADPTSRGDNPRIPAVSAARKQDVLLADRPVSSWPKDVAMDADYEGLSSDLADERI--RAG------GD-WRSAPSAEWMRLVPPMKRRAQQPAAVRGGRGGPSPRRGPGGSAFQVFKADDTESAEGGAAKRPR-LGTRLGYDRYGEDELF----RVDDQDRDEAR----ARRPVVPAASPAATFSPGTTTSTSLVVAAGGGALRTPNPTRARGPRGALPNR-RRVSIAAPLRYRNTGYRSQDYTPLVHKKRRSMSGGQRFGAGTLGDFLGETGTGSRSARSPSAAGANDGRRSSSDRLGSSPGLGGEASKRLAEDGQEGRDVPLSARGRGQARGSGSPAAGSKRAASHLGLAGMNATPRRRVL----EEAVAREGKMLVKKVEAEAEATAFVGGILMKVVSQESKSRDVGRQVREEQVRRANKNXXXXXXXXXXXXPKRVGTEQRT--------DERGSRTKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPLAATQPAASLFAFPPPTSASSPSPAQKGSEFDFKDALAPGRL----QQQGGDAANGGGDLMAXXXXXXXSCSDADFAFGTTTSRRAPAR---RAAEVFFRFSQSFPGKRAAS-ARDKDSGTLALASDRDEDDAMGGDPPAFEFSTEPRKARKTRRGATAGKTSAEQTAMAPLDVAPLAIAGASSKPSGGXXXXXXXXXXXXSAAPPVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            +LG+RSY EKR  + +LADPT+R  NPR+P + A +K+ V  A RPV SW +   +  D EG + DLADER   RAG      GD WR APS+EW RLVP M+RRA QPA     R   S +R  G SAF  F A  T +A    A   R L  R GYD    DEL     R+D+QDRD+A     ARR   P A   A+   G T  + +  AA G   RTP P RA G  G    R RR S+ + LRYR     S+++TP   +   +++G QR+GAGTLGD+LGET    +  R                          +ASKR A   QE    PL  +G  Q + +G+PAA +KRAAS LGL GM+ATPRR+ +    E AVA EG+ LV++V AEA+ATA VG ILM VVSQES+ RDV RQVREEQ  R  +              +R G  Q T        D RGS   ++                              A AP AA                      ++ SEF F  +  P RL    QQ+ GDA +G GD           C D DFAFG  ++   PAR   R  +  F FS   P KRA    +  ++G L    D   D   G    AFEFST+PRKAR+TRRG  AGK++ EQ  MAPL VAPL++AG                    S              + PGEWKC ACLVRN P  TKC SCE PKPG     +A                   FTFGV     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          GGFDMS F+KPGEWKCDACLVRN P  TKC S
Sbjct: 1797 VLGKRSYGEKRDLVGFLADPTARPANPRVPVLPAEQKRRVRRASRPVESWDERPILAIDQEGQAEDLADERTTKRAGVWCGATGDKWRRAPSSEWTRLVPTMQRRAGQPAV----RAVASTKRTLG-SAFGAFTALGTSAAAVHLAGDLRKLSARPGYDG---DELTPMLQRLDEQDRDDAATAAAARRRPAPDAGAMASGFTGATNLSLVRAAAAGTPSRTPKPARAGGGLGVGAARDRRQSVGSALRYR-----SREFTPR-RRPSLAVAGEQRYGAGTLGDWLGET---PKQPRPGXXXXXXXXXXXXXXXXXXXXXXXXQASKRRAVRRQE---SPLLVQGL-QGQENGTPAASNKRAASSLGLDGMDATPRRKTMAIMEERAVAEEGRELVRRVAAEAKATAEVGSILMSVVSQESRGRDVTRQVREEQGLRERETQKKTELN------QRAGGNQPTTGEAGKVADVRGSPGHEEREEERRKQDDKRGRSETASFTFAAATRPPVAVAPQAAAW--------------------RESSEFGFTTSPGPARLRLQQQQENGDANDGWGDGAMSVDSLYPDC-DGDFAFGAPSASHPPARSAQRQQQPLFCFSNPPPVKRALEYGQGSETGVLTTTDDMGRDIPAG----AFEFSTKPRKARRTRRGVAAGKSAVEQQ-MAPLAVAPLSVAG--------------------SGDXXXXXXXXAKTSEPPGEWKCGACLVRNPPDATKCLSCEVPKPGA--SPAAXXXXXXXXXXXXXXXXXPKFTFGVVPDA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASTSTAPTAGGFDMSKFRKPGEWKCDACLVRNPPDATKCLS 2594          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: D7FVB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB0_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 1.300e-86
Identity = 361/875 (41.26%), Postives = 431/875 (49.26%), Query Frame = 0
Query:    1 MLGERSYDEKRQTLDYLADPTSRGDNPRIPAVSAARKQDVLLADRPVSSWPKDVAMDADYEGLSSDLADERI--RAG------GD-WRSAPSAEWMRLVPPMKRRAQQPAAVRGGRGGPSPRRGPGGSAFQVFKADDTESAE-GGAAKRPRLGTRLGYDRYGEDELF----RVDDQDRDEARARRPVVPAASPAATFSPGTTTSTSLVVAAGGGALRTPNPTRARGPRGALPNR--------RRVSIAAPLRYRNTGYRSQDYTPLVHKKRRSMSGGQRFGAGTLGDFLGETGTGSRSARSPSAAGANDGRRSSSDRLGSSPGLG-GEASKRLAEDGQEGRDVPLSARGRGQARGSGSPAAGSKRAASHLGLAGMNATPRRRVL----EEAVAREGKMLVKKVEAEAEATAFVGGILMKVVSQESKSRDVGRQVREEQ-VRRANKNXXXXXXXXXXXXPKRVGTEQRT-DERGSRTKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPLAATQPAASLFAFPPPTSASSPSPAQKGSEFDFKDA-LAPGRLQQQGGDAANGGGDLMAXXXXXXXSC---SDADFAFGTTTSRRAPARRAA----EVFFRFSQSFPGKRAAS-ARDKDSGTLALASDRDEDDAMGGDPPA--FEFSTEPRKARKTRRGATAGKTSAEQTAMAPLDVAPLAIAGASSKPSGGXXXXXXXXXXXXSAAPPVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            +LG+RSY EKR  + +LADPT+R  NPR+P + A +K+ V  A RPV SW +   +D D EG + DLADER   RAG      GD WR APS+EW RLVP M+RRA QP      R   S +R  G SAF  F A  T +A    A    +L  R GYD    DEL     R+D+QDRD+A                                                             RR S+ + LRYR     S+++TP   +   +M+G QRFGAGTLGD+LGE     R    P   GA                 G G+ASKR     QE    PL   G  Q + SG+PAA +KRAAS LGL GM+ATPRR+ +    E AVA EG+ LV++V AEA+ATA VG ILM VVSQE+K RDV RQVREEQ +R    N               +G   +  D R SR +++                                   AATQ    L     P +A+S    ++ SEF F  +   P RL                X      S     D DFAFG  ++   PAR A     +  F FS   P KRA    +  ++G L    D      MG D PA  FEFST+PRKAR+TRRG  AGK++ EQ  MAPL VAPL++AG+                   S+AP +TNGFDMS F+KPGEWKC ACLVRN P  TKC SCE PKPG    +                  T  FTFGV    G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        GGFDMS F+KPGEWKC ACLVRN P  TKC S
Sbjct: 1523 VLGKRSYGEKRDLVGFLADPTARPANPRVPVLPAEQKRRVRRAARPVESWDERPILDIDQEGQAEDLADERTTKRAGAWCGATGDKWRRAPSSEWTRLVPTMQRRAGQPVV----RVVASTKRTLG-SAFGTFTARGTSAAAVHHAGDLRKLSARPGYDG---DELTPMLRRLDEQDRDDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARDRRQSVGSALRYR-----SREFTPR-RRPSLAMAGEQRFGAGTLGDWLGEAPKQPR----PGPVGAAAXXXXXXXXXXXXXXTGQGQASKRREVGRQE---SPLLVEG-SQGQESGTPAASNKRAASSLGLDGMDATPRRKTMAMMDERAVAEEGRELVRRVAAEAKATAEVGSILMSVVSQENKGRDVTRQVREEQGLRERETNKKTELNQRAGGTQPTIGEAGKVADVRDSRGQEEREVKERRKQDEKKRGRSETASFTFA----------AATQ----LPVAVAPQAAAS----RESSEFGFTTSPKGPARLXXXXXXXXXXXXXXXXXGAMSVDSMYPDCDGDFAFGVPSASHPPARSAQRQQQQPLFCFSDPPPVKRALEHGQGSETGVLTTTDD------MGRDVPAGAFEFSTKPRKARRTRRGVAAGKSAVEQQ-MAPLAVAPLSVAGSGGGAKTSEPSKVAAGAAAASSAP-ITNGFDMSKFRKPGEWKCGACLVRNPPDATKCLSCEVPKPGA--SAXXXXXXXXXXXXXXXXXXTPKFTFGVVPDAGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTAPTA-GGFDMSKFRKPGEWKCAACLVRNPPDATKCLS 2346          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A1S3NYS8_SALSA (RanBP-type and C3HC4-type zinc finger-containing protein 1 n=3 Tax=Salmo salar TaxID=8030 RepID=A0A1S3NYS8_SALSA)

HSP 1 Score: 68.6 bits (166), Expect = 5.720e-8
Identity = 46/156 (29.49%), Postives = 55/156 (35.26%), Query Frame = 0
Query:  682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFT--FGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            P  +GF +   KKPG+W CD C VRN+     C SC+TP P             G  A G+ A AT S    FG   +                                               GF     KK G+W CD CLVRND   +KC S
Sbjct:  928 PFDSGFGVQFGKKPGQWDCDTCAVRNEASANSCLSCQTPNPS------------GKAAAGAPALATLSTRSGFGAQFSNKLGQWDCDTCVVRNEASSSSCVSCQTPNPSAKSTVEVAPTTKPTVSGFAALFSKKDGQWDCDTCLVRNDASASKCVS 1071          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: UPI0019018110 (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI0019018110)

HSP 1 Score: 66.6 bits (161), Expect = 2.310e-7
Identity = 43/153 (28.10%), Postives = 58/153 (37.91%), Query Frame = 0
Query:  683 VTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            + +GF     KKPG+W+CD CLVRN+   + C SC+TP P    D   +A          + P+T SF      A G                                             GF     KKPG+W CD C+VRN+  ++ C S
Sbjct: 1555 IGSGFGAQFGKKPGQWECDTCLVRNEESASSCVSCQTPNPVAKTDVDGAA---------ESKPSTMSF-----GAPGLATLSTG-------------------------------------SGFGAQFSKKPGQWDCDTCVVRNEASSSSCVS 1656          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A673XRX8_SALTR (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XRX8_SALTR)

HSP 1 Score: 66.2 bits (160), Expect = 2.990e-7
Identity = 42/151 (27.81%), Postives = 52/151 (34.44%), Query Frame = 0
Query:  685 NGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            +GF     KKPG+W CD C VRN+     C SC+TP P             G  A G  A AT S   G  +  G                                             GF     KK G+W CD C+VRN+  ++ C S
Sbjct: 1424 SGFGAQFSKKPGQWDCDTCAVRNEASANSCLSCQTPNPS------------GKAAAGGPALATLSTRSGFGAQFGKKTGQWECDVRNDESTSSCVSCQTPNPPSTMPFGAPASATLSTGSGFGAQFSKKLGQWDCDTCVVRNEASSSSCVS 1562          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A835ZBV9_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 9.600e-7
Identity = 27/35 (77.14%), Postives = 27/35 (77.14%), Query Frame = 0
Query:  691 MFKKP-GEWKCDACLVRNDPGTTKCASCETPKPGV 724
            MFK   GEWKCDACLVRN PG TKCASCETP  G 
Sbjct:   73 MFKAAAGEWKCDACLVRNAPGATKCASCETPAAGA 107          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: UPI001E1C7C7C (E3 SUMO-protein ligase RanBP2 isoform X3 n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001E1C7C7C)

HSP 1 Score: 63.9 bits (154), Expect = 1.530e-6
Identity = 44/156 (28.21%), Postives = 59/156 (37.82%), Query Frame = 0
Query:  682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFT--FGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            P ++GF +   KKPG+W+CD CLVRN+   + C SC+TP      D +   G+   +      P+T  F+  FGV                                                  GF     KK  +W CD CLVRND   +KC S
Sbjct: 1467 PFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNQA---DKTVVDGAAASM------PSTIPFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNPTAKSTVEVAPPPKPTVSGFGDLFSKKDRQWDCDTCLVRNDASASKCIS 1613          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: UPI001E1C888B (E3 SUMO-protein ligase RanBP2 isoform X2 n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001E1C888B)

HSP 1 Score: 63.9 bits (154), Expect = 1.530e-6
Identity = 44/156 (28.21%), Postives = 59/156 (37.82%), Query Frame = 0
Query:  682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFT--FGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            P ++GF +   KKPG+W+CD CLVRN+   + C SC+TP      D +   G+   +      P+T  F+  FGV                                                  GF     KK  +W CD CLVRND   +KC S
Sbjct: 1467 PFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNQA---DKTVVDGAAASM------PSTIPFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNPTAKSTVEVAPPPKPTVSGFGDLFSKKDRQWDCDTCLVRNDASASKCIS 1613          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A673XS05_SALTR (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XS05_SALTR)

HSP 1 Score: 63.5 bits (153), Expect = 1.980e-6
Identity = 43/154 (27.92%), Postives = 53/154 (34.42%), Query Frame = 0
Query:  682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            P  +GF +   KKPG+W CD C VRN+     C SC+TP P           SG   AGG   PA ++ + G                                                   GF     KKPG+W CD C VRN+     C S
Sbjct: 1347 PFDSGFGVQFGKKPGQWDCDTCAVRNEASANSCLSCQTPNP-----------SGKPAAGG---PALATLSNG--------------------------------------------------SGFGAQFSKKPGQWDCDTCAVRNEASANSCLS 1436          
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A673XS32_SALTR (E3 SUMO-protein ligase RanBP2-like n=2 Tax=Salmo trutta TaxID=8032 RepID=A0A673XS32_SALTR)

HSP 1 Score: 63.5 bits (153), Expect = 1.990e-6
Identity = 43/154 (27.92%), Postives = 53/154 (34.42%), Query Frame = 0
Query:  682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
            P  +GF +   KKPG+W CD C VRN+     C SC+TP P           SG   AGG   PA ++ + G                                                   GF     KKPG+W CD C VRN+     C S
Sbjct: 1327 PFDSGFGVQFGKKPGQWDCDTCAVRNEASANSCLSCQTPNP-----------SGKPAAGG---PALATLSNG--------------------------------------------------SGFGAQFSKKPGQWDCDTCAVRNEASANSCLS 1416          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7J5_9PHAE6.650e-9742.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVB0_ECTSI1.300e-8641.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1S3NYS8_SALSA5.720e-829.49RanBP-type and C3HC4-type zinc finger-containing p... [more]
UPI00190181102.310e-728.10E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salveli... [more]
A0A673XRX8_SALTR2.990e-727.81E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo t... [more]
A0A835ZBV9_9STRA9.600e-777.14RanBP2-type domain-containing protein (Fragment) n... [more]
UPI001E1C7C7C1.530e-628.21E3 SUMO-protein ligase RanBP2 isoform X3 n=1 Tax=C... [more]
UPI001E1C888B1.530e-628.21E3 SUMO-protein ligase RanBP2 isoform X2 n=1 Tax=C... [more]
A0A673XS05_SALTR1.980e-627.92E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo t... [more]
A0A673XS32_SALTR1.990e-627.92E3 SUMO-protein ligase RanBP2-like n=2 Tax=Salmo t... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 405..429
NoneNo IPR availableCOILSCoilCoilcoord: 448..468
NoneNo IPR availableGENE3D4.10.1060.10coord: 665..723
e-value: 1.9E-14
score: 55.1
coord: 782..835
e-value: 1.3E-8
score: 36.5
NoneNo IPR availablePANTHERPTHR23193:SF23NUCLEAR PORE COMPLEX PROTEIN NUP153coord: 659..797
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 696..720
e-value: 1.2E-5
score: 34.8
coord: 815..835
e-value: 0.8
score: 12.6
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 694..723
e-value: 1.4E-8
score: 33.9
coord: 813..834
e-value: 2.1E-4
score: 20.5
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 698..717
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 813..835
score: 8.558
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 694..723
score: 10.952
IPR026054Nuclear pore complex proteinPANTHERPTHR23193NUCLEAR PORE COMPLEX PROTEIN NUPcoord: 659..797
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 695..722

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:579099..582508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16427.1mRNA_C-linearis_contig89.16427.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 579099..583121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16427.1 ID=prot_C-linearis_contig89.16427.1|Name=mRNA_C-linearis_contig89.16427.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=835bp
MLGERSYDEKRQTLDYLADPTSRGDNPRIPAVSAARKQDVLLADRPVSSW
PKDVAMDADYEGLSSDLADERIRAGGDWRSAPSAEWMRLVPPMKRRAQQP
AAVRGGRGGPSPRRGPGGSAFQVFKADDTESAEGGAAKRPRLGTRLGYDR
YGEDELFRVDDQDRDEARARRPVVPAASPAATFSPGTTTSTSLVVAAGGG
ALRTPNPTRARGPRGALPNRRRVSIAAPLRYRNTGYRSQDYTPLVHKKRR
SMSGGQRFGAGTLGDFLGETGTGSRSARSPSAAGANDGRRSSSDRLGSSP
GLGGEASKRLAEDGQEGRDVPLSARGRGQARGSGSPAAGSKRAASHLGLA
GMNATPRRRVLEEAVAREGKMLVKKVEAEAEATAFVGGILMKVVSQESKS
RDVGRQVREEQVRRANKNKKNEQQQQQRQQPKRVGTEQRTDERGSRTKQQ
QQQQQQQQQQQQQKARSETASFTFTSTSIPATAPLAATQPAASLFAFPPP
TSASSPSPAQKGSEFDFKDALAPGRLQQQGGDAANGGGDLMALATTTTTS
CSDADFAFGTTTSRRAPARRAAEVFFRFSQSFPGKRAASARDKDSGTLAL
ASDRDEDDAMGGDPPAFEFSTEPRKARKTRRGATAGKTSAEQTAMAPLDV
APLAIAGASSKPSGGSAGTAGTTGTASSAAPPVTNGFDMSMFKKPGEWKC
DACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSF
TFGVSSATGGSASAATSTPSAAFTFGAPASASAAGSSGGASPASAAPAPA
PAPGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR026054Nucleoporin
IPR036443Znf_RanBP2_sf