prot_C-linearis_contig89.16427.1 (polypeptide) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A6H5L7J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J5_9PHAE) HSP 1 Score: 343 bits (880), Expect = 6.650e-97 Identity = 370/874 (42.33%), Postives = 442/874 (50.57%), Query Frame = 0
Query: 1 MLGERSYDEKRQTLDYLADPTSRGDNPRIPAVSAARKQDVLLADRPVSSWPKDVAMDADYEGLSSDLADERI--RAG------GD-WRSAPSAEWMRLVPPMKRRAQQPAAVRGGRGGPSPRRGPGGSAFQVFKADDTESAEGGAAKRPR-LGTRLGYDRYGEDELF----RVDDQDRDEAR----ARRPVVPAASPAATFSPGTTTSTSLVVAAGGGALRTPNPTRARGPRGALPNR-RRVSIAAPLRYRNTGYRSQDYTPLVHKKRRSMSGGQRFGAGTLGDFLGETGTGSRSARSPSAAGANDGRRSSSDRLGSSPGLGGEASKRLAEDGQEGRDVPLSARGRGQARGSGSPAAGSKRAASHLGLAGMNATPRRRVL----EEAVAREGKMLVKKVEAEAEATAFVGGILMKVVSQESKSRDVGRQVREEQVRRANKNXXXXXXXXXXXXPKRVGTEQRT--------DERGSRTKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPLAATQPAASLFAFPPPTSASSPSPAQKGSEFDFKDALAPGRL----QQQGGDAANGGGDLMAXXXXXXXSCSDADFAFGTTTSRRAPAR---RAAEVFFRFSQSFPGKRAAS-ARDKDSGTLALASDRDEDDAMGGDPPAFEFSTEPRKARKTRRGATAGKTSAEQTAMAPLDVAPLAIAGASSKPSGGXXXXXXXXXXXXSAAPPVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
+LG+RSY EKR + +LADPT+R NPR+P + A +K+ V A RPV SW + + D EG + DLADER RAG GD WR APS+EW RLVP M+RRA QPA R S +R G SAF F A T +A A R L R GYD DEL R+D+QDRD+A ARR P A A+ G T + + AA G RTP P RA G G R RR S+ + LRYR S+++TP + +++G QR+GAGTLGD+LGET + R +ASKR A QE PL +G Q + +G+PAA +KRAAS LGL GM+ATPRR+ + E AVA EG+ LV++V AEA+ATA VG ILM VVSQES+ RDV RQVREEQ R + +R G Q T D RGS ++ A AP AA ++ SEF F + P RL QQ+ GDA +G GD C D DFAFG ++ PAR R + F FS P KRA + ++G L D D G AFEFST+PRKAR+TRRG AGK++ EQ MAPL VAPL++AG S + PGEWKC ACLVRN P TKC SCE PKPG +A FTFGV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGFDMS F+KPGEWKCDACLVRN P TKC S
Sbjct: 1797 VLGKRSYGEKRDLVGFLADPTARPANPRVPVLPAEQKRRVRRASRPVESWDERPILAIDQEGQAEDLADERTTKRAGVWCGATGDKWRRAPSSEWTRLVPTMQRRAGQPAV----RAVASTKRTLG-SAFGAFTALGTSAAAVHLAGDLRKLSARPGYDG---DELTPMLQRLDEQDRDDAATAAAARRRPAPDAGAMASGFTGATNLSLVRAAAAGTPSRTPKPARAGGGLGVGAARDRRQSVGSALRYR-----SREFTPR-RRPSLAVAGEQRYGAGTLGDWLGET---PKQPRPGXXXXXXXXXXXXXXXXXXXXXXXXQASKRRAVRRQE---SPLLVQGL-QGQENGTPAASNKRAASSLGLDGMDATPRRKTMAIMEERAVAEEGRELVRRVAAEAKATAEVGSILMSVVSQESRGRDVTRQVREEQGLRERETQKKTELN------QRAGGNQPTTGEAGKVADVRGSPGHEEREEERRKQDDKRGRSETASFTFAAATRPPVAVAPQAAAW--------------------RESSEFGFTTSPGPARLRLQQQQENGDANDGWGDGAMSVDSLYPDC-DGDFAFGAPSASHPPARSAQRQQQPLFCFSNPPPVKRALEYGQGSETGVLTTTDDMGRDIPAG----AFEFSTKPRKARRTRRGVAAGKSAVEQQ-MAPLAVAPLSVAG--------------------SGDXXXXXXXXAKTSEPPGEWKCGACLVRNPPDATKCLSCEVPKPGA--SPAAXXXXXXXXXXXXXXXXXPKFTFGVVPDA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASTSTAPTAGGFDMSKFRKPGEWKCDACLVRNPPDATKCLS 2594
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: D7FVB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB0_ECTSI) HSP 1 Score: 313 bits (801), Expect = 1.300e-86 Identity = 361/875 (41.26%), Postives = 431/875 (49.26%), Query Frame = 0
Query: 1 MLGERSYDEKRQTLDYLADPTSRGDNPRIPAVSAARKQDVLLADRPVSSWPKDVAMDADYEGLSSDLADERI--RAG------GD-WRSAPSAEWMRLVPPMKRRAQQPAAVRGGRGGPSPRRGPGGSAFQVFKADDTESAE-GGAAKRPRLGTRLGYDRYGEDELF----RVDDQDRDEARARRPVVPAASPAATFSPGTTTSTSLVVAAGGGALRTPNPTRARGPRGALPNR--------RRVSIAAPLRYRNTGYRSQDYTPLVHKKRRSMSGGQRFGAGTLGDFLGETGTGSRSARSPSAAGANDGRRSSSDRLGSSPGLG-GEASKRLAEDGQEGRDVPLSARGRGQARGSGSPAAGSKRAASHLGLAGMNATPRRRVL----EEAVAREGKMLVKKVEAEAEATAFVGGILMKVVSQESKSRDVGRQVREEQ-VRRANKNXXXXXXXXXXXXPKRVGTEQRT-DERGSRTKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAPLAATQPAASLFAFPPPTSASSPSPAQKGSEFDFKDA-LAPGRLQQQGGDAANGGGDLMAXXXXXXXSC---SDADFAFGTTTSRRAPARRAA----EVFFRFSQSFPGKRAAS-ARDKDSGTLALASDRDEDDAMGGDPPA--FEFSTEPRKARKTRRGATAGKTSAEQTAMAPLDVAPLAIAGASSKPSGGXXXXXXXXXXXXSAAPPVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
+LG+RSY EKR + +LADPT+R NPR+P + A +K+ V A RPV SW + +D D EG + DLADER RAG GD WR APS+EW RLVP M+RRA QP R S +R G SAF F A T +A A +L R GYD DEL R+D+QDRD+A RR S+ + LRYR S+++TP + +M+G QRFGAGTLGD+LGE R P GA G G+ASKR QE PL G Q + SG+PAA +KRAAS LGL GM+ATPRR+ + E AVA EG+ LV++V AEA+ATA VG ILM VVSQE+K RDV RQVREEQ +R N +G + D R SR +++ AATQ L P +A+S ++ SEF F + P RL X S D DFAFG ++ PAR A + F FS P KRA + ++G L D MG D PA FEFST+PRKAR+TRRG AGK++ EQ MAPL VAPL++AG+ S+AP +TNGFDMS F+KPGEWKC ACLVRN P TKC SCE PKPG + T FTFGV G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGFDMS F+KPGEWKC ACLVRN P TKC S
Sbjct: 1523 VLGKRSYGEKRDLVGFLADPTARPANPRVPVLPAEQKRRVRRAARPVESWDERPILDIDQEGQAEDLADERTTKRAGAWCGATGDKWRRAPSSEWTRLVPTMQRRAGQPVV----RVVASTKRTLG-SAFGTFTARGTSAAAVHHAGDLRKLSARPGYDG---DELTPMLRRLDEQDRDDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARDRRQSVGSALRYR-----SREFTPR-RRPSLAMAGEQRFGAGTLGDWLGEAPKQPR----PGPVGAAAXXXXXXXXXXXXXXTGQGQASKRREVGRQE---SPLLVEG-SQGQESGTPAASNKRAASSLGLDGMDATPRRKTMAMMDERAVAEEGRELVRRVAAEAKATAEVGSILMSVVSQENKGRDVTRQVREEQGLRERETNKKTELNQRAGGTQPTIGEAGKVADVRDSRGQEEREVKERRKQDEKKRGRSETASFTFA----------AATQ----LPVAVAPQAAAS----RESSEFGFTTSPKGPARLXXXXXXXXXXXXXXXXXGAMSVDSMYPDCDGDFAFGVPSASHPPARSAQRQQQQPLFCFSDPPPVKRALEHGQGSETGVLTTTDD------MGRDVPAGAFEFSTKPRKARRTRRGVAAGKSAVEQQ-MAPLAVAPLSVAGSGGGAKTSEPSKVAAGAAAASSAP-ITNGFDMSKFRKPGEWKCGACLVRNPPDATKCLSCEVPKPGA--SAXXXXXXXXXXXXXXXXXXTPKFTFGVVPDAGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTAPTA-GGFDMSKFRKPGEWKCAACLVRNPPDATKCLS 2346
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A1S3NYS8_SALSA (RanBP-type and C3HC4-type zinc finger-containing protein 1 n=3 Tax=Salmo salar TaxID=8030 RepID=A0A1S3NYS8_SALSA) HSP 1 Score: 68.6 bits (166), Expect = 5.720e-8 Identity = 46/156 (29.49%), Postives = 55/156 (35.26%), Query Frame = 0
Query: 682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFT--FGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
P +GF + KKPG+W CD C VRN+ C SC+TP P G A G+ A AT S FG + GF KK G+W CD CLVRND +KC S
Sbjct: 928 PFDSGFGVQFGKKPGQWDCDTCAVRNEASANSCLSCQTPNPS------------GKAAAGAPALATLSTRSGFGAQFSNKLGQWDCDTCVVRNEASSSSCVSCQTPNPSAKSTVEVAPTTKPTVSGFAALFSKKDGQWDCDTCLVRNDASASKCVS 1071
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: UPI0019018110 (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI0019018110) HSP 1 Score: 66.6 bits (161), Expect = 2.310e-7 Identity = 43/153 (28.10%), Postives = 58/153 (37.91%), Query Frame = 0
Query: 683 VTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
+ +GF KKPG+W+CD CLVRN+ + C SC+TP P D +A + P+T SF A G GF KKPG+W CD C+VRN+ ++ C S
Sbjct: 1555 IGSGFGAQFGKKPGQWECDTCLVRNEESASSCVSCQTPNPVAKTDVDGAA---------ESKPSTMSF-----GAPGLATLSTG-------------------------------------SGFGAQFSKKPGQWDCDTCVVRNEASSSSCVS 1656
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A673XRX8_SALTR (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XRX8_SALTR) HSP 1 Score: 66.2 bits (160), Expect = 2.990e-7 Identity = 42/151 (27.81%), Postives = 52/151 (34.44%), Query Frame = 0
Query: 685 NGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
+GF KKPG+W CD C VRN+ C SC+TP P G A G A AT S G + G GF KK G+W CD C+VRN+ ++ C S
Sbjct: 1424 SGFGAQFSKKPGQWDCDTCAVRNEASANSCLSCQTPNPS------------GKAAAGGPALATLSTRSGFGAQFGKKTGQWECDVRNDESTSSCVSCQTPNPPSTMPFGAPASATLSTGSGFGAQFSKKLGQWDCDTCVVRNEASSSSCVS 1562
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A835ZBV9_9STRA (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV9_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 9.600e-7 Identity = 27/35 (77.14%), Postives = 27/35 (77.14%), Query Frame = 0
Query: 691 MFKKP-GEWKCDACLVRNDPGTTKCASCETPKPGV 724
MFK GEWKCDACLVRN PG TKCASCETP G
Sbjct: 73 MFKAAAGEWKCDACLVRNAPGATKCASCETPAAGA 107
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: UPI001E1C7C7C (E3 SUMO-protein ligase RanBP2 isoform X3 n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001E1C7C7C) HSP 1 Score: 63.9 bits (154), Expect = 1.530e-6 Identity = 44/156 (28.21%), Postives = 59/156 (37.82%), Query Frame = 0
Query: 682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFT--FGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
P ++GF + KKPG+W+CD CLVRN+ + C SC+TP D + G+ + P+T F+ FGV GF KK +W CD CLVRND +KC S
Sbjct: 1467 PFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNQA---DKTVVDGAAASM------PSTIPFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNPTAKSTVEVAPPPKPTVSGFGDLFSKKDRQWDCDTCLVRNDASASKCIS 1613
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: UPI001E1C888B (E3 SUMO-protein ligase RanBP2 isoform X2 n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001E1C888B) HSP 1 Score: 63.9 bits (154), Expect = 1.530e-6 Identity = 44/156 (28.21%), Postives = 59/156 (37.82%), Query Frame = 0
Query: 682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFT--FGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
P ++GF + KKPG+W+CD CLVRN+ + C SC+TP D + G+ + P+T F+ FGV GF KK +W CD CLVRND +KC S
Sbjct: 1467 PFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNQA---DKTVVDGAAASM------PSTIPFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSCQTPNPTAKSTVEVAPPPKPTVSGFGDLFSKKDRQWDCDTCLVRNDASASKCIS 1613
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A673XS05_SALTR (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XS05_SALTR) HSP 1 Score: 63.5 bits (153), Expect = 1.980e-6 Identity = 43/154 (27.92%), Postives = 53/154 (34.42%), Query Frame = 0
Query: 682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
P +GF + KKPG+W CD C VRN+ C SC+TP P SG AGG PA ++ + G GF KKPG+W CD C VRN+ C S
Sbjct: 1347 PFDSGFGVQFGKKPGQWDCDTCAVRNEASANSCLSCQTPNP-----------SGKPAAGG---PALATLSNG--------------------------------------------------SGFGAQFSKKPGQWDCDTCAVRNEASANSCLS 1436
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Match: A0A673XS32_SALTR (E3 SUMO-protein ligase RanBP2-like n=2 Tax=Salmo trutta TaxID=8032 RepID=A0A673XS32_SALTR) HSP 1 Score: 63.5 bits (153), Expect = 1.990e-6 Identity = 43/154 (27.92%), Postives = 53/154 (34.42%), Query Frame = 0
Query: 682 PVTNGFDMSMFKKPGEWKCDACLVRNDPGTTKCASCETPKPGVGGDSSASAGSGGILAGGSNAPATSSFTFGVSSATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFDMSMFKKPGEWKCDACLVRNDPGTTKCAS 835
P +GF + KKPG+W CD C VRN+ C SC+TP P SG AGG PA ++ + G GF KKPG+W CD C VRN+ C S
Sbjct: 1327 PFDSGFGVQFGKKPGQWDCDTCAVRNEASANSCLSCQTPNP-----------SGKPAAGG---PALATLSNG--------------------------------------------------SGFGAQFSKKPGQWDCDTCAVRNEASANSCLS 1416 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig89.16427.1 ID=prot_C-linearis_contig89.16427.1|Name=mRNA_C-linearis_contig89.16427.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=835bpback to top |