prot_C-linearis_contig89.16399.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig89.16399.1
Unique Nameprot_C-linearis_contig89.16399.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length148
Homology
BLAST of mRNA_C-linearis_contig89.16399.1 vs. uniprot
Match: D7G8Q1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 7.760e-48
Identity = 104/148 (70.27%), Postives = 109/148 (73.65%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEGGGGDHDAREAADGSPAADEIRAVQDEIRGIXXXXXXXXXVERKIEDAEEETAEVVKKVDGIEAAIAGGSRYLGMTDPEALLKQLDSKEGQLQQLRREKEQ---------LRELLLKEKDRLSRIEQLRANNAPA 139
            MTSLSAMSEGDEE GGGDHDAREAAD  PAADEIRAVQD+IRG          VERK EDAE+ETAEVVKK+D IEAAIAGGSRYLGMTDPEALLKQL  KE Q                   L ELLLK++DR SRIEQLRANNAPA
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAVQDDIRG----------VERKXEDAEKETAEVVKKIDDIEAAIAGGSRYLGMTDPEALLKQLGRKEEQXXXXXXXXXXXXXXXRELLLNELLLKKEDRFSRIEQLRANNAPA 138          
BLAST of mRNA_C-linearis_contig89.16399.1 vs. uniprot
Match: D8LPP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.730e-44
Identity = 103/160 (64.38%), Postives = 107/160 (66.88%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEGGGGDHDAREAADGSPAADEIRAVQDEIRGIXXXXXXXXXVERKIEDAEEETAEVVKKVDGIEAAIAGGSRYLGMTDPEALLKQLDSKEGQLQQLRREKEQLR---------------------ELLLKEKDRLSRIEQLRANNAPA 139
            MT LSAMSEGDEE GGGDH AREAAD  PAADEIRAVQDEIRG          VERKIEDAEEETAEVVKK+D IEAAIAGG+RYLGMTDPEALLKQL+       QLRR                           ELLLK +DRLSR EQ RANNAPA
Sbjct:    8 MTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAVQDEIRG----------VERKIEDAEEETAEVVKKIDDIEAAIAGGARYLGMTDPEALLKQLE-------QLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXELLLKTEDRLSRSEQFRANNAPA 150          
BLAST of mRNA_C-linearis_contig89.16399.1 vs. uniprot
Match: D7G515_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 8.690e-43
Identity = 106/150 (70.67%), Postives = 116/150 (77.33%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEGGGGDHDAREAADGSPAADEIRAVQDEIRGIXXXXXXXXXVERKIEDAEEETAEVVKKVDGIEAAIAGGSRYLGMTDPEALLKQLDSKEGQLQQLRREKEQLRE---------LLLKEKDRLSRIEQLRANNAPAGI 141
            MTS SAMSEGDEE GGGDHDAREAADGSPAADEIRAVQ      XXXXXXXXX       AEEETAEVVKK+D IEAAIAGGS+YLGMTDPEALLKQL  KE QL+  R+E ++            +LLK++DRLSRIEQLRANNAPAG+
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAVQ---XXXXXXXXXXXXXXXXXXXAEEETAEVVKKIDYIEAAIAGGSKYLGMTDPEALLKQLGRKEEQLR--RKEGKEXXXXXXXXXXXXILLKKEDRLSRIEQLRANNAPAGV 145          
BLAST of mRNA_C-linearis_contig89.16399.1 vs. uniprot
Match: D7G3Q8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 7.900e-26
Identity = 90/163 (55.21%), Postives = 99/163 (60.74%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEGGGGDHDAREAADGSPAADEIRAVQDEIRGIXXXXXXXXXVERKIEDAEEETAEVVKKVDGIEAA-IAGGSRYLGMTDPEALLKQLDSKEGQLQQLRREKEQL---------------RELLLKEKDRLSRIEQLRANNAPAGIEASHYV 147
            +TSLSA+SEG+EE GGGDHD REAA GSPAADEIRAVQ      XXXXXXXXX                 K+D +EAA IAGGS YLGMTDPEALLK              EKE+L                ++L+KEK RL  IEQ RANNAPAG EASHYV
Sbjct:    8 ITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXX----------XXKIDDVEAATIAGGSGYLGMTDPEALLK--------------EKERLGXXXXXXXXXXXXXXXQVLVKEK-RLFSIEQRRANNAPAGTEASHYV 145          
BLAST of mRNA_C-linearis_contig89.16399.1 vs. uniprot
Match: D7FM56_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 2.130e-23
Identity = 74/105 (70.48%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    1 MTSLSAMSEGDEEGGGGDHDAREAADGSPAADEIRAVQDEIRGIXXXXXXXXXVERKIEDAEEETAEVVKKVDGIEAAIAGGSRYLGMTDPEALLKQLDSKEGQL 105
            MTSLSAMSEG EE GGGDH AREAADGSPAADEIRAVQ      XXXXXXXXX                   DGIEAAIAGGSRYLGMTDPEALLKQL  KE QL
Sbjct:   76 MTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAVQXXXXXXXXXXXXXXXXXXXX----------XXXTDGIEAAIAGGSRYLGMTDPEALLKQLGRKEEQL 170          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G8Q1_ECTSI7.760e-4870.27Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
D8LPP1_ECTSI1.730e-4464.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G515_ECTSI8.690e-4370.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3Q8_ECTSI7.900e-2655.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FM56_ECTSI2.130e-2370.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..78
NoneNo IPR availableCOILSCoilCoilcoord: 98..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:210073..231593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16399.1mRNA_C-linearis_contig89.16399.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig89 210073..231593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig89.16399.1 ID=prot_C-linearis_contig89.16399.1|Name=mRNA_C-linearis_contig89.16399.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=148bp
MTSLSAMSEGDEEGGGGDHDAREAADGSPAADEIRAVQDEIRGIRAVQDE
IRGVERKIEDAEEETAEVVKKVDGIEAAIAGGSRYLGMTDPEALLKQLDS
KEGQLQQLRREKEQLRELLLKEKDRLSRIEQLRANNAPAGIEASHYV*
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