prot_C-linearis_contig88.16385.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig88.16385.1 vs. uniprot
Match: D7G7J5_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J5_ECTSI) HSP 1 Score: 283 bits (724), Expect = 1.760e-82 Identity = 265/680 (38.97%), Postives = 353/680 (51.91%), Query Frame = 0
Query: 1 RSRRPWRTLFERVLGSLPYGAVLSLTEASGNSSIGRGERESLKGDGSLAAVAAAGKVLWANEGFEKLAGVDAVDIIGQEICCLFDEGEREEGEGGEGEERGKLKRSLELGKNCMLWMAMAGRQDGVTDVLCLHQTVAVSSQLSDEGRYSVLMFFDTASILFKS---QEQGGRGWGGRDKGMDEGSVTQPDREERAVLDQEREDKHRESSRRQACHDLSKAMVILLSGG-DVDV-EGDLPEA--TSDRPFIDSRESENPISSGRDNSRNSPVVNETGRLEEKYAGRETRDIDYGAE-GEGDPEQRPSTLERPSLLGLSRELDGLSRDLQR---DELDGELLEARLASECGVVNEPRSDSVE-DLPLSDIPRTHGGGGQR--EEVGVEVEQHAFTRDKEQYQQHVPPTSPPHSAVDHD--AAEYSSGDESSAPPRVDLLLSPYRASTPARSTVSAEEQQV---------AGETIRSPHRDSSNGSTTIA-EKTLLTPATDSAVSGSGRSPAPTAKYDD-ATPPSTARNLRLSLDGYKDDFC-DDEDESA--YLAHPEAEGEGSVGKSFDATAGNNITXXXXXXXXXXXXXXXXXXXXKFEGMGNKSETFRGGDSGGVAGGFDDGGD-NEYAADGYASSASDGVYSGTAAGGLEADLHGGRYDG-------NNDTSWGGSPEG 642
RSRRPWRTLFER LGSLPYGAVLSL +G ++ + A AAAGKV+WA+EGFEKLAGVDA+D++GQE+ LF+ G EE E EGEE G+LKRSLE+G+ C LWM M +QDG+T+VLC+HQ V V QLS+EGRYSVL+FFDTAS+LF++ Q + GG +G S+ + D+ RE R++ C+ LS+AM LL+ DVD+ +G L EA + D +SE SG D S + +V+ RL E D+ G + G G+ S +RP L S D+ R +E GE L L E G+V+E + + + L+ + G G R ++ R +Q+ SP SA AAEYSSGDESS PR DLL SP R A +TVS E ++ G H D SNG + +++L +P++ V+GS S T + ++ A +T + S D Y+DDFC D+EDES L+ PE E EG V + ++ N I + G E GG G V GGFD G + D Y+SS+SDGVYSGT AGGL+ +LHGG DG N++ +W GSPEG
Sbjct: 9 RSRRPWRTLFERTLGSLPYGAVLSLAGENGEENLP-----------ASTATAAAGKVVWASEGFEKLAGVDAIDVVGQEVGSLFEVGGTEEDE--EGEEAGELKRSLEIGQGCTLWMTMGEQQDGLTNVLCVHQPVTVPPQLSEEGRYSVLLFFDTASVLFENPPRQATEQQAEGGEVRGQQADSLYLKGK-----------DQDREQYRQRTCYSLSRAMATLLADNVDVDIADGLLKEACVSFDGNNDTGYQSETLTPSGDDKS--ARIVHGRRRLGSNDIEGEAGDVYLGGQRGSGEVRGPTSQEQRPLLQSKRSGTTYRSDDVSRYAAEERKGEYLRGDLLLESGIVDEQQHGASHIEGHLTSSGQLENGRGSRSGDDDXXXGRTSGNIRRIQQHXXXXXXXSPAFSAXTESGGAAEYSSGDESSTEPRDDLLTSPGREEATAAATVSPAEPKLFDGGDERIDGGSNSNVHHGDLSNGGGNSSFDRSLFSPSSRPPVAGSRISLDRTQESEEEAGTDATTMQRKGSDDPYEDDFCCDEEDESLPLSLSRPEQE-EGRVTVK-NISSDNTINHGP-------------------DNGGGWGEAVTGGHRG-VDGGFDVKGHWQDDKDDSYSSSSSDGVYSGTVAGGLKINLHGGGVDGVESERDDNDELTWEGSPEG 640
BLAST of mRNA_C-linearis_contig88.16385.1 vs. uniprot
Match: A0A6H5KCS4_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCS4_9PHAE) HSP 1 Score: 278 bits (712), Expect = 1.050e-80 Identity = 256/684 (37.43%), Postives = 354/684 (51.75%), Query Frame = 0
Query: 1 RSRRPWRTLFERVLGSLPYGAVLSLTEASGNSSIGRGERESLKGDGSLAAVAAAGKVLWANEGFEKLAGVDAVDIIGQEICCLFDEGEREEGEGGEGEERGKLKRSLELGKNCMLWMAMAGRQDGVTDVLCLHQTVAVSSQLSDEGRYSVLMFFDTASILFKS---QEQGGRGWGGRDKGMDEGSVTQPDREERAVLDQEREDKHRESSRRQACHDLSKAMVILLSGG-DVDV-EGDLPEATSDRPFIDSRESENPISSGRDNSRNSPVVNETGRLEEKYAGRETRDIDYGAEGEGDPEQRPSTLERPSLLGLSRE-LDGLSRDLQR---DELDGELLEARLASECGVVNEPR--SDSVEDLPLSDIPRTHGGGGQREEVGVEVEQHAF--TRDKEQYQQHVPPTSPPHSAVDHD--AAEYSSGDESSAPPRVDLLLSPYRASTPARSTVSAEE--------QQVAGETIRSPHRD--SSNGSTTIAEKTLLTPATDSAVSGSGRSPAPTAKYDDATPPSTARNLRL-SLDGYKDDFC-DDEDESAYLAHPE-AEGEGSV-GK--SFDATAGNNITXXXXXXXXXXXXXXXXXXXXKFEGMGNKSETFRGGDSGGVAGGFDDGG----DNEYAADGYASSASDGVYSGTAAGGLEADLHGGRYDG-------NNDTSWGGSPEG 642
RSRRPWRTLFER LGSLPYGAVLSL +G I + AAAGKV+WA+EGFEKLAGVDA D++GQE+ LF+ G EE + EGEE G+LKRSLELG+ C LWM M ++DG+T+VLC+HQ V V QLS+EGRYSVL+FFDTAS+L ++ Q +G GG G S+ + D+ RE R++ C+ LS+AM +LL+ VD+ G L EA + + ++ + + R++ +V+E RL K G E D+ G + + P++ E+ SLL R S D+ R +E +G+ L L + G+V+E + + +ED + +G G + + E E R +Q++Q +P + P SA AAEYSSGDE+S PR DLL SP R A +T S E +++ GE + H S+ G + +++ L+P++ ++GS S T + ++ T R S D Y+DDFC D+EDES L+ P A+ EG V GK S D T N G GV GFD G D + D Y+SS+SD VYSGT AGGL+ +LHGG DG N++ +W GSPEG
Sbjct: 21 RSRRPWRTLFERTLGSLPYGAVLSLARENGEDDIQ-----------ASTTTAAAGKVVWASEGFEKLAGVDAFDVVGQEVGFLFEVGGNEEDD--EGEEAGELKRSLELGQGCTLWMTMGEQRDGLTNVLCVHQPVTVPPQLSEEGRYSVLLFFDTASVLLENPRRQATEEQGEGGEIGGKQADSLYLKGK-----------DQDREQYRQRTCYSLSRAMALLLADNVAVDIANGLLKEAYVSFEGNNDTDYQSETLTPSSDDRSARIVHEIRRLGSKEVGGEAGDVYLGGQRGNGEVRGPTSQEQRSLLQSKRSGTTYCSDDVSRYPTEEREGKYLRGDLLMDSGIVDEQQHGASHIEDQLICSGQPVNGRGSRSGDDDEEEEGRTSGNIRRIQQHRQQLPKSFPAFSAATESCGAAEYSSGDETSTEPRDDLLGSPGREGATAEATASPAEPKLFDGGDERIDGEFNNNVHHGGLSNGGGNSSFDRSFLSPSSRPPMAGSRISLDRTQESEEEAGTDTTTVQREGSDDPYEDDFCCDEEDESLSLSLPRPAQEEGRVTGKYISSDITINNGPVV---------------------------------GGHRGVDDGFDVKGHWQGDKD---DAYSSSSSDDVYSGTVAGGLQINLHGGGVDGVESERDDNDELTWEGSPEG 644 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig88.16385.1 ID=prot_C-linearis_contig88.16385.1|Name=mRNA_C-linearis_contig88.16385.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=642bpback to top |