prot_C-linearis_contig88.16346.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16346.1
Unique Nameprot_C-linearis_contig88.16346.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length886
Homology
[Close]
BLAST of mRNA_C-linearis_contig88.16346.1 vs. uniprot
Match: D8LJW6_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW6_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 7.370e-81
Identity = 558/658 (84.80%), Postives = 587/658 (89.21%), Query Frame = 0 
Query:    1 MQKIWSPKRRSTGKPKDAPASGHSGTTS-KLWPDAAAGKTASVKKFLRNGGHVDSRNKDTMWTLLHTSCHTGQYRVVEVLVASGAKLESEVEGRYNPFLLCCSCGSCEKVVCPVAMSAPTEDDVEDPEHLDECGHIKAVRILVNAGANLESTTDQLFTPLLIAAFNGKLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYCRDREGSAPGEVFEAEVDPATQRQIQVLLWGEEATKQREQDEMKSGNQVA-------AGAIDTRYRRSSTPQVVSQMGFEGVL-KAWGPLHLAAHRGSAAEVRELLTKPGVDKEELLERSFTPLSLAAQYGRADCIAELLEGG 649
            M + WS +R   G+ +    SG SG    KLWPDAAAGK+AS+KKFLRNGGHVD+RNKDTMWTLLHT+CH GQ RVVEVLV++GAKLESEVEG+YNP LLCCSCG    +VCPV  S P E  VED EH +ECGH+KA R+L+ AGANLESTTDQLFTPLLIA FNGKL       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RD EGSAPGEVFEAEV PAT+RQIQVLLWGEEAT+Q E+ + K  +          + A+DTRYRRSSTPQVVSQ+   G   KAWGPLH+A HRGS++EVRELLT+PGVDKEELLERSF+PL LAAQ GRADCIAELLEGG
Sbjct:    1 MTRFWSRRRSLLGRREHELTSGSSGNKPPKLWPDAAAGKSASIKKFLRNGGHVDARNKDTMWTLLHTACHAGQNRVVEVLVSAGAKLESEVEGQYNPLLLCCSCGCHNNMVCPVLRSVPNEH-VEDLEHFEECGHMKAARVLLKAGANLESTTDQLFTPLLIAVFNGKL--GLSKCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGRDHEGSAPGEVFEAEVGPATRRQIQVLLWGEEATEQLERAKAKPSDTTTIEDRTAGSSAVDTRYRRSSTPQVVSQVVSGGATTKAWGPLHMAIHRGSSSEVRELLTRPGVDKEELLERSFSPLLLAAQCGRADCIAELLEGG 655
[Close]
BLAST of mRNA_C-linearis_contig88.16346.1 vs. uniprot
Match: D8LJW4_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW4_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 2.240e-10
Identity = 107/149 (71.81%), Postives = 119/149 (79.87%), Query Frame = 0 
Query:  738 GTLDLAALLVDNGASFRAVTSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGANPLAMDDDGHAAGRSYDEAVDETTRKRISKTLRAARKQSKGNTSIMRDKSGEESDS-DSASDTSAGLLA 885
            GTLDLA LL+ NGA+  AVT+R    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ANP A+DDDGH AGR YDEAV E  +K+ISKTLRAARKQ +G++  +    GEE +  D   D+S GLLA
Sbjct:   19 GTLDLAVLLIANGANLSAVTNRRMSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANPNAIDDDGHVAGRWYDEAVAEAVKKQISKTLRAARKQRQGSSVAV----GEELEMPDVEPDSSTGLLA 163
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJW6_ECTSI7.370e-8184.80Inversin protein alternative isoform n=1 Tax=Ectoc... [more]
D8LJW4_ECTSI2.240e-1071.81Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 792..821
e-value: 0.028
score: 23.6
coord: 319..348
e-value: 0.012
score: 24.8
coord: 591..621
e-value: 540.0
score: 7.0
coord: 352..381
e-value: 0.76
score: 18.8
coord: 154..183
e-value: 0.018
score: 24.2
coord: 625..654
e-value: 0.023
score: 23.9
coord: 253..282
e-value: 33.0
score: 13.4
coord: 220..249
e-value: 0.13
score: 21.4
coord: 486..515
e-value: 37.0
score: 13.2
coord: 420..449
e-value: 810.0
score: 5.7
coord: 658..687
e-value: 0.58
score: 19.2
coord: 759..788
e-value: 0.071
score: 22.2
coord: 385..414
e-value: 2.0E-4
score: 30.7
coord: 453..482
e-value: 0.0017
score: 27.6
coord: 59..88
e-value: 5.5
score: 16.0
coord: 92..150
e-value: 970.0
score: 5.1
coord: 726..755
e-value: 0.0097
score: 25.1
coord: 691..720
e-value: 0.47
score: 19.5
coord: 286..315
e-value: 0.0014
score: 27.9
coord: 187..216
e-value: 0.16
score: 21.0
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 454..482
e-value: 6.3E-4
score: 20.1
coord: 223..251
e-value: 0.024
score: 15.1
coord: 287..317
e-value: 0.0018
score: 18.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 319..351
score: 10.526
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 286..318
score: 11.033
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 658..690
score: 10.419
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 187..219
score: 10.179
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 154..186
score: 11.621
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 253..285
score: 9.458
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 220..252
score: 11.06
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 453..485
score: 11.674
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 759..791
score: 11.514
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 352..384
score: 9.297
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 385..417
score: 12.556
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 792..824
score: 11.274
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 726..758
score: 10.152
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 625..657
score: 10.526
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..115
e-value: 1.4E-9
score: 39.7
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 253..421
e-value: 6.2E-47
score: 161.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 715..880
e-value: 1.8E-28
score: 101.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 590..714
e-value: 5.6E-29
score: 103.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 422..561
e-value: 1.7E-20
score: 75.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 127..252
e-value: 2.5E-32
score: 113.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 132..523
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 29..111
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 593..829
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 761..821
e-value: 8.4E-8
score: 32.7
coord: 663..753
e-value: 1.9E-11
score: 44.4
coord: 133..217
e-value: 2.3E-10
score: 40.9
coord: 326..415
e-value: 1.7E-11
score: 44.5
coord: 593..655
e-value: 1.2E-6
score: 29.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 34..829
score: 150.238
NoneNo IPR availablePANTHERPTHR24126FAMILY NOT NAMEDcoord: 39..201
coord: 254..381
coord: 355..527
coord: 592..755
coord: 133..252
coord: 628..830
coord: 317..413
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 90..121
score: 7.441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:313950..326185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16346.1mRNA_C-linearis_contig88.16346.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 313950..326185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16346.1 ID=prot_C-linearis_contig88.16346.1|Name=mRNA_C-linearis_contig88.16346.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=886bp
MQKIWSPKRRSTGKPKDAPASGHSGTTSKLWPDAAAGKTASVKKFLRNGG
HVDSRNKDTMWTLLHTSCHTGQYRVVEVLVASGAKLESEVEGRYNPFLLC
CSCGSCEKVVCPVAMSAPTEDDVEDPEHLDECGHIKAVRILVNAGANLES
TTDQLFTPLLIAAFNGKLELVKFLVAAGAHIEARNKQHYTALGIAAQQGH
AGTLGFLLDSGANIEARTDTKLTPLMVAAQEGREVEVQLLLRAGANVEAR
SDREYSALALASDFGRAQIARLLIVAGAEIESRDHRGCTPLMHASREGHD
EVVALILEARADATVVNDDRESAVALAAKYGHEEIAVSLLNAGADVNAAS
EREFTALLRAAEGGHTRLYQVLIDRGASPNASTTTGSTALLLACERGHLD
TMKLIIERGADLQASNAQGFKRVALLMAAQHAHGALAAELLNAGARTDTA
TGRGFTPLMLASVYGQHDLLVDLLDRGADLEATQETGDTALGLSSFFGRP
GAVAELVRRGANVYCRDREGSAPGEVFEAEVDPATQRQIQVLLWGEEATK
QREQDEMKSGNQVAAGAIDTRYRRSSTPQVVSQMGFEGVLKAWGPLHLAA
HRGSAAEVRELLTKPGVDKEELLERSFTPLSLAAQYGRADCIAELLEGGV
NIEARSDRAFTPLLLAAKGGHLDAVRELRAAGAAVEAKNDRSFTSLLIAC
QNNHKEVVEELITKPVKANLEARTDQGYTALLIACYSGTLDLAALLVDNG
ASFRAVTSRRISALHLAAEAGDTDLVRMLLLAGAPLETRSSTGDTPLTLA
THFGHARAVEKLLKMGANPLAMDDDGHAAGRSYDEAVDETTRKRISKTLR
AARKQSKGNTSIMRDKSGEESDSDSASDTSAGLLA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR0178964Fe4S_Fe-S-bd