prot_C-linearis_contig88.16342.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16342.1
Unique Nameprot_C-linearis_contig88.16342.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length214
Homology
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 3.440e-37
Identity = 88/210 (41.90%), Postives = 113/210 (53.81%), Query Frame = 0
Query:    1 AAAKGHSLCVSELLVRGAAKDPRTTAGETPLHLAAQDYHLRVVEQLLAAGANFEIRGYSSRLSALDKAASRGHAHVVRALL-KRGSNVKTSNRPVWTALH-RAVEDNVALDKGDVILLLLEAGADIEAKSTATGC-TPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTL 207
            AA+KGH+LC+SELL                                  A AN+ +R   +R S L+ AA  GHA V++ALL K  S +  ++   W ALH  AV D    D GD + +LL AGAD+   +    C TPL  A   R  S+GT+RALLEGG+N++ R  +  TPLH AC ++ V  V LLLRWGADEKLTN  GKT  D +
Sbjct:   23 AASKGHALCISELLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACANYGLRTEGTRCSPLEIAAHGGHADVLKALLDKDSSQLDDTDGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRKVSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVI 232          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.850e-36
Identity = 96/201 (47.76%), Postives = 118/201 (58.71%), Query Frame = 0
Query:    7 SLCVSELLVRGAAKDPRTTAGETPLHLAAQDYHLRVVEQLLAAGANFEIRGYSSRLSALDKAASRGHAHVVRALLKRGSN-VKTSNRPVWTALHRAVE-DNVALDKGDVILLLLEAGADIEAKSTATGC-TPLQWAARQRHASNGTIRALLEGGANVYVRDEIGG--TPLHTACSNSCVGAVALLLRWGADEKLTNENGKT 202
            +LC+SELL+                     + HL  V++LLAAGAN+ +R   SR S L+ AA+RG A VV+ALL + S  V  ++   W ALH A   D    D GD + +LL AGAD+ AK T   C T L  A  +R AS+GTIRALLEGGAN+  R  IGG  TPLH ACS S    V LLLRWGAD+KLT   G+T
Sbjct:  172 ALCISELLL-------------------GANSHLEAVQELLAAGANYSLRTNGSR-SPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINAR--IGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQT 350          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.040e-31
Identity = 79/156 (50.64%), Postives = 92/156 (58.97%), Query Frame = 0
Query:   60 SRLSALDKAASRGHAHVVRALL-KRGSNVKTSNRPVWTALHRAVE-DNVALDKGDVILLLLEAGADIEAKSTATGC-TPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTLGKWEE 212
            SR S L+ AA RGHA V++ALL KR S V T+N   W ALH     D    DKGD + +LL AGAD+  K T   C TPL  A  +   S GTI ALLEGGAN+  R     TPLH AC+      V LLLRWGADEKL N +G T  D +G  E+
Sbjct:  244 SRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQ 399          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: A0A6H5K6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K9_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 7.600e-27
Identity = 66/132 (50.00%), Postives = 81/132 (61.36%), Query Frame = 0
Query:   85 SNVKTSNRPVWTALHRAVED--NVALDKGDVILLLLEAGADIEAKSTATG--CTPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTLGKWEE 212
            S V  ++   +TALH  V D     LD GD + +LLEAGAD++AK+T  G   TPL +A  +R A  G IRALLEGGANV  RD    TPLH AC+ S V  V  LL WGADEKLT+ +G+T    +   EE
Sbjct:   10 SEVHATDDGGYTALHCCVCDINEPVLDNGDTVRVLLEAGADVDAKTTGDGNCATPLHYAVNRRIAPIGAIRALLEGGANVNARDVFDQTPLHVACARSSVNGVEFLLHWGADEKLTDLDGETPAGAIVDSEE 141          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.230e-26
Identity = 86/224 (38.39%), Postives = 111/224 (49.55%), Query Frame = 0
Query:    1 AAAKGHSLCVSELLVRGAAKDPRTTAGETPLHLAAQD--------------YHLRVVEQLLAAGANFEIRGY--SSRLSALDKAASRGHAHVVRALLKRGSNVKTSNRPVWTALHRAVEDNVALDKGDVILLLLEAGADIEAKSTATGC-TPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTL 207
            AA  GH   +  LL+  A    +T +  TPLHLAA +               HL  V++LLAAGAN  +R    +   S+LD AA RGHA V+ ALL + +        ++ A+     D    D GD +  LL  GAD+ AK+T + C +PL  A  +R AS+G I                   PLH AC +S V  V LLLRWGADEKLTN  GKT  D +
Sbjct:  143 AAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN--------IFFAMS---VDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVI 355          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 1.630e-24
Identity = 69/137 (50.36%), Postives = 85/137 (62.04%), Query Frame = 0
Query:   76 VVRALLKRGSN-VKTSNRPVWTALHRAVEDNV-ALDKGDVILLLLEAGADIEAKSTATG--CTPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTLG 208
            +V+A L   ++ V  ++   +TALH A    V   DKGD + +LL AGAD+ AK+T     C PL  A   R  S GTIRALLEGGA+V VRD    TPLH AC+ S V AV LLLRWGADEKLT++   T  D +G
Sbjct:  258 IVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIG 394          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: D8LQL7_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL7_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.820e-22
Identity = 64/134 (47.76%), Postives = 76/134 (56.72%), Query Frame = 0
Query:   82 KRGSNVKTSNRPVWTALHRAVE-DNVALDKGDVILLLLEAGADIEAKSTATGC--TPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTLGKWEE 212
            K  S +  +N     ALH A   D    + GD IL+LL AGAD+  K+T   C  TPL  A     ASNGTI ALLEGG +V  R +   TPLHTA   + V  V LLLRWGADEKL N +G T  D +G  E+
Sbjct:  205 KDSSELDATNDFGRAALHYAASFDGPVGNNGDAILVLLGAGADVNVKATTAVCCFTPLHVAVSHWKASNGTICALLEGGGHVNARTQHNNTPLHTAYECASVSVVELLLRWGADEKLANNDGDTPADVVGVLEQ 338          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.440e-22
Identity = 59/127 (46.46%), Postives = 76/127 (59.84%), Query Frame = 0
Query:   87 VKTSNRPVWTALHRAVEDNVALDKGDVILLLLEAGADIEAKSTATGC--TPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTLGKWE 211
            V T +   +TA+H AV  +  LD G V+ LLLEAG  + A++       TPL +A  +R AS  T  ALLEGGAN     +  GTPLH AC +S V AV LLLRWGADE  +N+NG    D +G ++
Sbjct:  269 VDTGDDQGYTAIHCAVNRHGPLDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYD 395          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: A0A6H5JHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHD6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.940e-21
Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   97 ALHRAVEDNVAL-DKGDVILLLLEAGADIEAKSTATGC-TPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTLG--KWEER 213
            ALH A    VA+ D GD +  LL AGAD+  ++T   C TPL  AA  R AS+GTIRALLEGGAN+    E   TPLH AC +  V  V LLL WGADEKLTN+ G T  D +G   W  R
Sbjct:  181 ALHCAAVFVVAVRDNGDAVRALLGAGADVNVEATNNICFTPLHLAACHRIASDGTIRALLEGGANINACTE-DETPLHEACWHLSVAGVELLLHWGADEKLTNDVGDTPADVIGTRSWRRR 300          
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Match: A0A6H5KVD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD2_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 4.850e-21
Identity = 58/135 (42.96%), Postives = 77/135 (57.04%), Query Frame = 0
Query:   76 VVRALLKRGSNVKTSNRPVW-TALHRAVEDNV-ALDKGDVILLLLEAGADIEAKSTATGCTPLQWAARQRHASNGTIRALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENGKTAEDTLG 208
            V+R LL  G++    +   W TALH A E +    DKG+ + +LLEAGADIEAK+     TP+  +A  R +++G I             +     PLH AC+ S V AV LLLRWGA+EKL +  G+TA DTLG
Sbjct:    8 VLRVLLGNGADANAKHVNNWKTALHHAAEPSRRGSDKGNAVRVLLEAGADIEAKTKDCSSTPVHLSACSRSSTSGAILXXXXXXXXXXAEEVDRCPPLHLACAKSSVPAVELLLRWGANEKLVDSLGQTAADTLG 142          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQI9_ECTSI3.440e-3741.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L812_9PHAE1.850e-3647.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQN0_ECTSI1.040e-3150.64Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
A0A6H5K6K9_9PHAE7.600e-2750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7E1_9PHAE3.230e-2638.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD22_ECTSI1.630e-2450.36MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
D8LQL7_ECTSI1.820e-2247.76Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ecto... [more]
D8LB27_ECTSI5.440e-2246.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHD6_9PHAE1.940e-2152.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVD2_9PHAE4.850e-2142.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 27..42
score: 42.05
coord: 113..127
score: 41.69
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 26..55
e-value: 9.6E-4
score: 28.4
coord: 131..162
e-value: 0.37
score: 19.8
coord: 93..126
e-value: 160.0
score: 10.8
coord: 60..89
e-value: 0.21
score: 20.7
coord: 166..197
e-value: 1100.0
score: 4.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 26..58
score: 12.823
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 166..198
score: 10.366
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 131..165
score: 11.648
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 96..129
score: 8.736
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 60..92
score: 10.286
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 108..209
e-value: 8.9E-24
score: 85.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..107
e-value: 6.9E-24
score: 86.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..205
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 98..196
e-value: 3.2E-11
score: 43.7
coord: 1..89
e-value: 8.8E-11
score: 42.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..203
score: 51.038
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 1..102
coord: 61..144
coord: 96..201
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 1..102
coord: 61..144
coord: 96..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:194689..195330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16342.1mRNA_C-linearis_contig88.16342.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 194689..195330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16342.1 ID=prot_C-linearis_contig88.16342.1|Name=mRNA_C-linearis_contig88.16342.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=214bp
AAAKGHSLCVSELLVRGAAKDPRTTAGETPLHLAAQDYHLRVVEQLLAAG
ANFEIRGYSSRLSALDKAASRGHAHVVRALLKRGSNVKTSNRPVWTALHR
AVEDNVALDKGDVILLLLEAGADIEAKSTATGCTPLQWAARQRHASNGTI
RALLEGGANVYVRDEIGGTPLHTACSNSCVGAVALLLRWGADEKLTNENG
KTAEDTLGKWEERL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom