prot_C-linearis_contig88.16339.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig88.16339.1
Unique Nameprot_C-linearis_contig88.16339.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length236
Homology
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.210e-16
Identity = 68/177 (38.42%), Postives = 101/177 (57.06%), Query Frame = 0
Query:   53 VPIGTASRGKYHAV----REQRQPTMLINCICSVATRKDGFGAAP-------------RITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAP--VQTAEGARKATTTSRPLTSMVPIMRRRA 210
            V +GTA  G+  +V    R++R+ + +   + + A   DG G  P             RI R++VDAG   T+ V++ + +  GG E  +N TPL + T L+ +K V+  +P  +EEQLH L+AIRRLLL+ +AVHA SW+WPSDAP  V   E +        PL+  +PI++RRA
Sbjct:   23 VLLGTAGLGREASVQFLLRQRRKESEM--SVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLN--GGVE--YNDTPLAVTTSLLREK-VVDGKPA-TEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRA 191          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 3.810e-14
Identity = 58/138 (42.03%), Postives = 81/138 (58.70%), Query Frame = 0
Query:   93 PRITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAPVQTAEGARKATTTSRPLTSM-VPIMRRRAGARARGMLLRSLLRQSKKP 229
            PR+ R++V+AG   T+ V + +    GG + S   TPL L  + + DK  ++ +   S EQLH L AIRRLLL+ EAVHA SW+WPSD    T   AR    T+   T++ +P++  R  AR R + L +LLR S KP
Sbjct:  302 PRVVRLLVEAGADTTSPVAVRNQL--GGDDVSI--TPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 1.020e-12
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 0
Query:   93 PRITRMIVDAGVTPTALVKIPHPHPDGGREQS-FNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAPV--QTAEGARKATTTSRPLTSMVPIMRRRAGARARGMLLRSLLRQSKK 228
            PRITR +VDAG   T+ V++        R ++  N TPL    D  +  R        ++EQL  L A RR+LL+  AVHA SW+WPSDAP+  + A   R A  +   LT+++P++RRRAG RA  +L  +L R SKK
Sbjct:  276 PRITRRLVDAGADTTSAVQL-----RAKRSRTCVNVTPLEYVNDWAL--RETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRA--LLWDTLFRYSKK 405          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.710e-12
Identity = 62/177 (35.03%), Postives = 93/177 (52.54%), Query Frame = 0
Query:   61 GKYHAVREQRQPTMLINCI--CSVATRKDGFGAAPRITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDA------PVQTAEGARKATTTSRPLTSMVPIMRRRAGARARGMLLRSLLRQSKKP 229
            G Y  VR++   T L++ I  C V    D   + PR+ R++V+AG   T  ++      +      F+ TPL+L   ++ DK+V  T   +S+++L  L  IRRLLLQ EAVHA SW+WPS +      P   AE        +  L  ++PI+RRRA  R  G++  +L R  +KP
Sbjct:  260 GAYVNVRDRNGTTPLLSSIYVCGV----DEQSSFPRVARLLVEAGADTTTELR----RTNSMGVVLFSCTPLKLTVHILQDKKVDGTY--ISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRA--RRPGVVWTALCRHQRKP 424          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 7.190e-12
Identity = 59/141 (41.84%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   93 PRITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAPV---QTAEGARKATTTSRPLTSMVPIMRRRAGARARGM--LLRSLLRQSKK 228
            PR+ +++V+AG   T+ V I +  P    E  F+ TPL L   L+  +     +P   EEQ + L  IRRLLL+EEAVHA SW+WPSD P     TA+G  + T TS   T  + +M    G R RG   LL +LLR S K
Sbjct:  302 PRVVQLLVEAGADTTSPVLICN-QPG---EDDFHITPLGLTMCLLGGRSA---KPLTMEEQ-NKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLM---IGRRTRGRKGLLAALLRYSSK 431          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 4.850e-11
Identity = 66/176 (37.50%), Postives = 89/176 (50.57%), Query Frame = 0
Query:   56 GTASRGKYHAVREQRQPTMLINCICSVATRKDGFGAAPRITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAPVQTAEGARKATTTSRPLTS---MVPIMRRRAGARARGMLLRSLLRQSKK 228
            G    G Y   R+    T L+ C       +  F  APRI RM+VDAG   T+ V++ +    GG    FN TPL   T L + K+++      ++E L  L AI RLLL+ +AVHA SW+WPS AP     G    T    PL +   M+PI++RR   R    L+ +LLR S K
Sbjct:  367 GCGVEGAYLNARDVNGYTPLVVCT------QGCFSQAPRIVRMLVDAGADTTSPVQVMNLK--GG--VVFNDTPLAF-TKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFI---GRATETDPEPPLPALKLMLPILKRRTKRRCG--LVATLLRYSVK 526          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 2.700e-9
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   93 PRITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDA 181
            PRI R++++AG   T++++      +   E   N TPL L T  + +K +   +P  +EE L  L AIRRLLL+ EAVHA SW+WPSDA
Sbjct:  286 PRIVRLLINAGADTTSVIR----GTNSEGEVQCNGTPLALTTSYLWEKILDNGEPA-TEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDA 369          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: A0A6H5JMS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMS6_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.080e-8
Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0
Query:  145 TQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAPV---QTAEGARKATTTSRPLTSMVPIMRRRAGARAR-GMLLRSLLR 224
            T+P L+EEQL+AL AIRRLLL+ EAVHA SW+W SD       TA+G  + T+ S P T +V  MR+RA +R    +LL +LLR
Sbjct:  207 TEP-LTEEQLNALEAIRRLLLRVEAVHAVSWLWSSDISTFTYSTAQGTGRTTSKSTPGTPLVLTMRQRARSRRELEVLLAALLR 289          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: D7FSU4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU4_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.330e-7
Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 0
Query:   93 PRITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAPV---QTAEGARKATTTSRPLTSMVPIMRRRAGARARGMLLRSLLR 224
            PR+ +++V+AG   T+ V +       G++   + TPL L   L+  +    T P L+EEQL  L+AIRRLLL+ EAVHA SW+W +D       TA G  +   TS   T ++ +MRRR   + R + L +LLR
Sbjct:  165 PRVGQLLVEAGADTTSAVPVSKHF---GKD---SVTPLGLTMRLLDGRS---TYP-LTEEQLKKLKAIRRLLLRVEAVHAVSWLWSTDISTITHSTAHGTDRTIATSTTGTPLMLMMRRRT--KRREVPLSALLR 287          
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 4.070e-7
Identity = 46/124 (37.10%), Postives = 61/124 (49.19%), Query Frame = 0
Query:   93 PRITRMIVDAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLSEEQLHALRAIRRLLLQEEAVHAASWMWPSDAPV--QTAEGARKATTTSRPLTSMVPIMRRRAGARA 214
            PRITR +VDAG   T+ V++     +  R +  N TPL    +                       A RR+LLQ  AVHA SWMWPSD PV  + A   R    +  PL++M+ ++RRRA  RA
Sbjct:  171 PRITRRLVDAGADTTSTVQL---RAERSRTR-VNMTPLEYVNE-----------------------ATRRVLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKHSPTPLSTMLTVLRRRARTRA 267          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LSC5_ECTSI1.210e-1638.42EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE3.810e-1442.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI1.020e-1241.73EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI2.710e-1235.03EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KQV0_9PHAE7.190e-1241.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI4.850e-1137.50EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVU0_ECTSI2.700e-943.82EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMS6_9PHAE2.080e-852.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSU4_ECTSI1.330e-738.52EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KEI1_9PHAE4.070e-737.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig88contigC-linearis_contig88:156796..158127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig88.16339.1mRNA_C-linearis_contig88.16339.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig88 155830..158869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig88.16339.1 ID=prot_C-linearis_contig88.16339.1|Name=mRNA_C-linearis_contig88.16339.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp
MWRCKPRCRCPQLRGAEAARGHHGGVGRRRSGGHERGSTQHRRQEKQREG
RQVPIGTASRGKYHAVREQRQPTMLINCICSVATRKDGFGAAPRITRMIV
DAGVTPTALVKIPHPHPDGGREQSFNTTPLRLATDLIVDKRVLLTQPTLS
EEQLHALRAIRRLLLQEEAVHAASWMWPSDAPVQTAEGARKATTTSRPLT
SMVPIMRRRAGARARGMLLRSLLRQSKKPCLELAD*
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