prot_C-linearis_contig87.16281.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig87.16281.1
Unique Name	prot_C-linearis_contig87.16281.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	134

Homology

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 3.090e-23
Identity = 57/129 (44.19%), Postives = 85/129 (65.89%), Query Frame = 0

Query:    2 YWIVGLEGQVKGVQANDMGVIFDVVDISD----GDLRVSYEEGLIDMAFDPGWSGN---SFFYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            +W++G+ G++  V +++M     V+D+S     G   V YEEGL+D+AF P +S +   ++FY+S+TVDL     + + +  NR++RFTY  GD   T+ SE +LLTT PK + IHSAGW+GFKPS YG
Sbjct:  189 WWLLGIAGEIYAVDSDNMDDSELVIDVSGSVTGGTFYVDYEEGLLDVAFGPMFSESGYPNYFYVSYTVDL-----NDDLMQRNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVYG 312

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 4.320e-23
Identity = 60/130 (46.15%), Postives = 84/130 (64.62%), Query Frame = 0

Query:    2 YWIVGLEGQVKGVQANDMGVIFDVVDISD-----GDLRVSYEEGLIDMAFDPGWSGNSF---FYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            +W++G+ GQ+  V ++ M     V+D+S      G+    +EEGL+D+AF P +  NS+   FY+S+TV L      GE +  NR+++FTY   D VATR SE +LLTT PK + IHSAGW+GFKPSDYG
Sbjct:  142 WWLLGISGQIYAVDSDSMDESELVIDVSGPVPSGGNFYDDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLL----DDGE-MQRNRLAKFTYFPEDPVATRASEEVLLTTVPKYNSIHSAGWLGFKPSDYG 266

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 9.250e-22
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 0

Query:   10 QVKGVQANDMGVIFDVV-DISDGDLRVSYEEGLIDMAFDPGWSGN---SFFYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            QV     +D  ++ DV   ++DG   V YEEGL+D+AF P +S +   ++FY+S+TVDL    + GE +  NR++RFTY  GD   T+ SE +LLT+ PKS+ IHSAGW+GFKPS YG
Sbjct:  137 QVDSDNMDDSSLVIDVSGSVTDGTFYVDYEEGLLDVAFGPMFSESDYPNYFYVSYTVDL----NDGE-VQRNRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPSVYG 249

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: D7G962_ECTSI (GSDH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G962_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.280e-21
Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = 0

Query:    2 YWIVGLEGQVKGVQANDMGVIFDVVDI-----SDGDLRVSYEEGLIDMAFDPGWSGNSF---FYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            +W++G+ GQ+  V ++ M     V+ +     S G   V +EEGL+D+AF P +  NS+   FY+S+TV L      GE    NR++RFTY  GD  ATR SE +LLTT P+   +H+AGW+GFKPS YG
Sbjct:  116 WWLLGISGQIYAVNSDSMDESELVIHVAGPVPSGGSFYVDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLL----DDGENQ-RNRLARFTYVPGDAAATRASEEVLLTTVPRFISVHAAGWLGFKPSAYG 240

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 1.260e-19
Identity = 58/128 (45.31%), Postives = 77/128 (60.16%), Query Frame = 0

Query:    4 IVGLEGQVKGVQANDMGVIFDVVDI-----SDGDLRVSYEEGLIDMAFDPGWSGNSF---FYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            +V L G ++ V  + M     V+D+     S G     +EEGL+D+AF P +  NS+   FY+S+TV L      GE    NR++RFTY  GD  ATR SE +LLTT PK + +HSAGW+GFKPS YG
Sbjct:   45 VVPLRGSMRQVNLDSMDESELVIDVAGPVPSGGSFYGDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLL----DDGENQ-RNRLARFTYVPGDAAATRASEEVLLTTVPKYNSVHSAGWLGFKPSAYG 167

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.360e-18
Identity = 52/98 (53.06%), Postives = 67/98 (68.37%), Query Frame = 0

Query:   29 SDGDLRVSYEEGLIDMAFDPGWSGNSF---FYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            S G+    +EEGL+D+ F P +S  S+   FY+S+TV L      GE +  NR++RFTY  GD VATR +E +LLTT PK + IHSAGW+GFKPSDYG
Sbjct:  114 SGGNFYDDFEEGLLDVVFGPMFSVPSYPSYFYVSYTVLL----DDGE-MQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYG 206

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.080e-17
Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 0

Query:    2 YWIVGLEGQVKGVQANDMGVIFDVVDISDGDLRVSYEEGLIDMAFDPGWSGNSFFYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            +WI+GL+GQ+  V   D      V+D+S   L  ++EEGL+ MAF P +     FY S+         +G + G NR+SRF Y       T  SE IL+T++ K S +HSAGW+GFKPS YG
Sbjct:  100 WWILGLKGQIVEVDVADATWAKTVLDMSSLVLW-TFEEGLLSMAFSPAFHTTGVFYASYV--------NGPSFGTNRLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYG 212

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 3.290e-16
Identity = 49/122 (40.16%), Postives = 69/122 (56.56%), Query Frame = 0

Query:    2 YWIVGLEGQVKGVQANDMGVIFDVVDISDGDLRVSYEEGLIDMAFDPGWSGNSFFYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            +WI+GL+GQ+  V   D      V+D+S   L  ++EEGL+ MAF P +     FY S+         +G + G NR+SRF Y       T  SE +L+ ++ K S +HSAGW+GFKPS YG
Sbjct:  187 WWILGLKGQIVEVDVADPTSAKTVLDMSSLILW-TFEEGLLSMAFSPAFHTTGVFYASYV--------NGPSFGTNRLSRFKYDPNSAENTLGSEEVLIISSEKQSNVHSAGWIGFKPSSYG 299

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 5.290e-15
Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0

Query:   40 GLIDMAFDPGWSGNSF---FYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILLTTTPKSSFIHSAGWVGFKPSDYG 123
            GL+D+AF P +  +S+   FY+S+TV L      GE    NR++RFTY  GD VATR +E +LLTT PK + +HSAGW+GFKPS YG
Sbjct:  206 GLLDLAFGPMFGDDSYPQYFYVSYTVLL----DDGENQ-RNRLARFTYVPGDPVATRATEEVLLTTVPKYNSVHSAGWLGFKPSVYG 287

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BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Match: A0A419GUD8_9ACTN (Glucose dehydrogenase n=1 Tax=Gaiellales bacterium TaxID=2093372 RepID=A0A419GUD8_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 1.650e-5
Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 0

Query:    4 IVGLEGQVKGVQANDMGVIFDVVDISDGDLRVSYEEGLIDMAFDPGWSGNSFFYLSHTVD-LGATGSSGETLGNNRISRFTYSAGD---TVATRISELILLTTTPKSSFIHSAGWVGFKPSDY 122
            +V   G +K  +  +      ++DISD  +    E+GLI +AFDPG++GN +FY+++T    GAT          RISRFT SAG      A   SE ++L   P+    H+ G + F P  Y
Sbjct:   81 VVEQAGVIKVFEDREGAEALVLLDISDR-VESGGEQGLIGLAFDPGFAGNGYFYVNYTASPSGAT----------RISRFTTSAGPGGALAADAGSEEVMLEQ-PQPYSNHNGGMLAFGPDGY 191

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot

BLAST of mRNA_C-linearis_contig87.16281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D7G4P3_ECTSI	3.090e-23	44.19	Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus...	[more]
D7G957_ECTSI	4.320e-23	46.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JZF5_9PHAE	9.250e-22	48.31	GSDH domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D7G962_ECTSI	1.280e-21	43.85	GSDH domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D7G960_ECTSI	1.260e-19	45.31	Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus...	[more]
A0A6H5KT40_9PHAE	2.360e-18	53.06	GSDH domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5KS07_9PHAE	1.080e-17	41.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FJN8_ECTSI	3.290e-16	40.16	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G961_ECTSI	5.290e-15	52.87	Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus...	[more]
A0A419GUD8_9ACTN	1.650e-5	34.96	Glucose dehydrogenase n=1 Tax=Gaiellales bacterium...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	2.120.10.30		coord: 1..123 e-value: 5.3E-15 score: 57.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig87	contig	C-linearis_contig87:135204..137127 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig87.16281.1	mRNA_C-linearis_contig87.16281.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig87 135204..137146 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig87.16281.1 ID=prot_C-linearis_contig87.16281.1|Name=mRNA_C-linearis_contig87.16281.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=134bp
MYWIVGLEGQVKGVQANDMGVIFDVVDISDGDLRVSYEEGLIDMAFDPGW
SGNSFFYLSHTVDLGATGSSGETLGNNRISRFTYSAGDTVATRISELILL
TTTPKSSFIHSAGWVGFKPSDYGQGVRAVARKP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011042	6-blade_b-propeller_TolB-like