prot_C-linearis_contig86.16251.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: D8LRE2_ECTSI (DEAD domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE2_ECTSI) HSP 1 Score: 266 bits (680), Expect = 9.950e-77 Identity = 152/286 (53.15%), Postives = 193/286 (67.48%), Query Frame = 0
Query: 6 LHPALSRSLKAEEEEATPLQMSLWAEGSAGSDIIIEATSSPGTATALAVLVIERLVDALEAVEAAIPFYLRNRRR---------------LQSQSRSXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXDKRPKLQALVLTKNREIAASVTDALQRIGKGCVPNLAVATLTGGVAVAENAKTLEDGCHVAVGTPGRVKFLMDKGVLRAEPARQLVLESADWLLAPVFLEDVRYIVSKFPQEKQVVASSTVEPTAAIVESLCALVGVPALKRLDASGAVQESRVRMP 276
L PAL +SL+AEE + TPLQ S+W+E AG+D++IEA S P T TALAVLV++RLV A+ + EAA+P Y R R L++ S + L +P+L ALVLTKNRE+AA V D L R+GK VPNL +A+L GG+AV+ENA+TL GCHVA+GTPGRVKFL+DKGVL A+ R LVLESADWL+APVF+EDV Y+V +FP+EKQVV SSTV+P+ A E LC ++GVPALKRLD SGA++E++VRMP
Sbjct: 3 LPPALQKSLEAEEVQVTPLQASVWSEARAGADLLIEAKSGPETTTALAVLVLDRLVAAISSAEAALPRYARKRTSSFSGLSGLNRIVSSVLRTTSSNNNGNSNVKDGESDLSTANGSSGSGGLL-------KPQLCALVLTKNREVAAGVKDTLLRLGKTSVPNLTIASLVGGIAVSENAQTLSAGCHVAIGTPGRVKFLIDKGVLVADTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRLDPSGAIEEAQVRMP 281
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: A0A6H5KMB9_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMB9_9PHAE) HSP 1 Score: 205 bits (521), Expect = 7.680e-54 Identity = 115/152 (75.66%), Postives = 126/152 (82.89%), Query Frame = 0
Query: 822 LARLGQNITSLSVATLIGGVPVAENHRALADG-CNVAVGTPGRVKFLMKEGALKVSAS-KTLVLDSADWLMAPVFEEDVGWIAARFPKDKQVLAFSGADPKTYEAGLTALVGSSGMTPIGCSCPV-DSG---CASTAMVLEQGEALAAALTG 967
L RLG+ I SLSVATLIGGVPV+ENH+ALA G CNV VGTPGRVKFL+KEG L+VSA+ +TLVLDSADWLMAPVF +DVGWIA FPKDKQVLAFSGADP TY+AGLTALV SSGMTP+G S DSG C STAM L+ GEA AALTG
Sbjct: 2 LTRLGEGIPSLSVATLIGGVPVSENHKALAGGGCNVVVGTPGRVKFLIKEGTLRVSAAARTLVLDSADWLMAPVFHDDVGWIARNFPKDKQVLAFSGADPATYKAGLTALVDSSGMTPVGVSSGGGDSGGGDCVSTAMTLDNGEAAVAALTG 153
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: A0A6H5KKW2_9PHAE (DEAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW2_9PHAE) HSP 1 Score: 186 bits (471), Expect = 5.610e-45 Identity = 91/135 (67.41%), Postives = 112/135 (82.96%), Query Frame = 0
Query: 142 DALQRIGKGCVPNLAVATLTGGVAVAENAKTLEDGCHVAVGTPGRVKFLMDKGVLRAEPARQLVLESADWLLAPVFLEDVRYIVSKFPQEKQVVASSTVEPTAAIVESLCALVGVPALKRLDASGAVQESRVRMP 276
+ L R+GK VPNL +A+L GG+AVAENA+TL GCHVA+GTPGRVKFL+DKGVL + R LVLESADWL+APVF+EDV Y+V +FP+EKQVV SSTV+P+ A E LC ++GVPALKRLD SGA+ E++VRMP
Sbjct: 2 ETLLRLGKSSVPNLTIASLVGGIAVAENARTLSAGCHVAIGTPGRVKFLIDKGVLVPDTGRLLVLESADWLMAPVFMEDVDYVVRRFPEEKQVVLSSTVKPSVAFEEGLCEILGVPALKRLDPSGAIGEAKVRMP 136
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: D8LRE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE3_ECTSI) HSP 1 Score: 157 bits (397), Expect = 1.480e-40 Identity = 90/149 (60.40%), Postives = 106/149 (71.14%), Query Frame = 0
Query: 697 SSLSLREEEWRMPPVLLTALEANGVTHPTPLQEAVWKGGRGRARADLIVHGRPGDETATAFCVPVLERVLERYPTSLAPKGVSAEMSARAPTSE----AAIPPPESQVYELVALVLTRTREMAADIAETLARLGQNITSLSVATLIGGV 841
S+ SLRE + +P LL +L+ANGVT PTPLQE+VW GRG R DL+VH RPGDETATA+CVPVLERVLERYP L E +ARAP AA + + YE+VALVLTRTR+MA+D+ L RLG+ I SLSVATLIGGV
Sbjct: 6 STASLREAKRNIPAELLASLDANGVTLPTPLQESVWSIGRGAGREDLLVHARPGDETATAYCVPVLERVLERYPQPLCG---DCEQAARAPAPSGGGGAACTGADREKYEVVALVLTRTRDMASDVTTMLTRLGEGIPSLSVATLIGGV 151
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: C1E4C7_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E4C7_MICCC) HSP 1 Score: 106 bits (264), Expect = 8.080e-21 Identity = 74/220 (33.64%), Postives = 108/220 (49.09%), Query Frame = 0
Query: 712 LLTALEANGVTHPTPLQEAVWKGGRGRARADLIVHGRPGDETATAFCVPVLERVLERYPTSLAPKGVSAEMSARAPTSEAAIPPPESQVYELVALVLTRTREMAADIAETLARLGQNIT--SLSVATLIGGVPVAENHRALADGCNVAVGTPGRVKFLMKEGALKVSASKTLVLDSADWLMAPVFEEDVGWIAARFPKDKQVLAFSGADPKTYEAGLTAL 929
++ L +G T P+P+Q A GR ADL+V + G F + ERV S Y ALVL TRE+A + LA+L + + +L VA +GG+PVA++ ALA GC + VGTPGRV+ L++EG++ +TLV+D AD L+ FE DV ++ + P+ KQV+AFS P A + +
Sbjct: 4 VVRGLNLSGFTIPSPVQRAAIP--LGRLGADLVVQAKSGTGKTVTFGAILCERV------------------------------DRSSAYPQ-ALVLAPTREVALQSRDALAKLARALDPPALRVACFLGGLPVADDRAALASGCQLCVGTPGRVRQLLEEGSMAPGGIRTLVIDEADALVGGAFEHDVLFVHSMLPERKQVMAFSATYPSRTLARIETM 190
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: UPI0009E35F65 (probable ATP-dependent RNA helicase DDX20 isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E35F65) HSP 1 Score: 108 bits (271), Expect = 2.590e-20 Identity = 69/218 (31.65%), Postives = 104/218 (47.71%), Query Frame = 0
Query: 710 PVLLTALEANGVTHPTPLQEAVWKGGRGRARADLIVHGRPGDETATAFCVPVLERVLERYPTSLAPKGVSAEMSARAPTSEAAIPPPESQVYELVALVLTRTREMAADIAETLARLGQNITSLSVATLIGGVPVAENHRALADGCNVAVGTPGRVKFLMKEGALKVSASKTLVLDSADWLMAPVFEEDVGWIAARFPKDKQVLAFSGADPKTYEAGLT 927
P +L L ++G P+P+Q GR DLI + G F V LE VL PES ++ L+L TRE+A I + ++ +G + ++ IGG+PV EN + L C++AVGTPGRVK+L++ LK + + +LD AD L+ F+E + WI + P +KQ++AFS P+ LT
Sbjct: 34 PDVLKGLNSSGFERPSPIQLKAIP--LGRCGLDLIAQAKSGTGKTCVFSVIALESVL-----------------------------PESNTTQV--LILAPTREIAVQIKDVISAIGSQMDNMVCQVFIGGLPVDENKKILKKPCHIAVGTPGRVKYLIENHFLKTESVRLFILDEADKLLEDNFQEQINWIFSSLPSNKQMMAFSATYPEYLAKHLT 218
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: UPI0012F9EEE0 (ATP-dependent RNA helicase DbpA n=1 Tax=Azohydromonas aeria TaxID=2590212 RepID=UPI0012F9EEE0) HSP 1 Score: 102 bits (255), Expect = 4.960e-19 Identity = 72/222 (32.43%), Postives = 104/222 (46.85%), Query Frame = 0
Query: 708 MPPVLLTALEANGVTHPTPLQEAVWKGGRGRARADLIVHGRPGDETATAFCVPVLERVLERYPTSLAPKGVSAEMSARAPTSEAAIPPPESQVYELVALVLTRTREMAADIAETLARLGQNITSLSVATLIGGVPVAENHRALADGCNVAVGTPGRVKFLMKEGALKVSASKTLVLDSADWLMAPVFEEDVGWIAARFPKDKQVLAFSGADPKTYEAGLTAL 929
+PP LL LE G T TP+Q A A DLI R G AF +P+L R+ ++ +E+ ALVL TRE+A + + + RL + ++ L GG P+ +LA G +V VGTPGR+ ++ G L++ A TLVLD AD ++ F +D+ +AA+ PK +Q L FS TY G+ L
Sbjct: 18 LPPALLDNLEQLGFTAMTPIQAAALP--LALAGHDLIAQARTGSGKTAAFALPLLTRL-------------------------------DTDRFEVQALVLCPTRELAEQVTQQIRRLARAEANVKALNLSGGSPIKPQAESLAHGAHVVVGTPGRLLDHLERGNLRLDALTTLVLDEADRMLDMGFFDDIAAVAAKCPKQRQTLLFSA----TYPEGIAKL 202
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: E6X032_NITSE (DEAD/DEAH box helicase domain protein n=2 Tax=Nitratifractor salsuginis TaxID=269261 RepID=E6X032_NITSE) HSP 1 Score: 102 bits (253), Expect = 5.210e-19 Identity = 71/224 (31.70%), Postives = 112/224 (50.00%), Query Frame = 0
Query: 710 PVLLTALEANGVTHPTPLQE----AVWKGGRGRARADLIVHGRPGDETATAFCVPVLERVLERYPTSLAPKGVSAEMSARAPTSEAAIPPPESQVYELVALVLTRTREMAADIAETLARLGQNITSLSVATLIGGVPVAENHRALADGCNVAVGTPGRVKFLMKEGALKVSASKTLVLDSADWLMAPVFEEDVGWIAARFPKDKQVLAFSGA---DPKTYEAGL 926
P +L A+ A G T PTP+Q AV +G D++ + G F +P+LER+++ P + + ++ ALVLT TRE+AA +AE++ G+N+ S + GGV + RA+A GC + + TPGR+ L + A+ +SA +TL+LD AD ++ F D+ I A+ PK++Q L FS + K AG+
Sbjct: 15 PAILKAVSAEGYTTPTPIQAQAIPAVLEG------HDVLAAAQTGTGKTAGFTLPLLERLIQN--------------------------PRQMKARQVRALVLTPTRELAAQVAESVRTYGKNLKIRST-VVYGGVGIEPQKRAIARGCEIVIATPGRLLDLANQRAIDLSALETLILDEADRMLDMGFIHDIKKIIAQTPKERQTLLFSATFSPEIKRLAAGM 205
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: UPI0015AEADEA (probable ATP-dependent RNA helicase DDX20 n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015AEADEA) HSP 1 Score: 99.0 bits (245), Expect = 6.240e-19 Identity = 65/203 (32.02%), Postives = 98/203 (48.28%), Query Frame = 0
Query: 723 HPTPLQ-EAVWKGGRGRARADLIVHGRPGDETATAFCVPVLERVLERYPTSLAPKGVSAEMSARAPTSEAAIPPPESQVYELVALVLTRTREMAADIAETLARLGQNITSLSVATLIGGVPVAENHRALADGCNVAVGTPGRVKFLMKEGALKVSASKTLVLDSADWLMAPVFEEDVGWIAARFPKDKQVLAFSGADPKTYEA 924
HP+P+Q EA+ GR DL++ + G F V LE +++ + L L++ TRE+A I + + +G + T L A+ IGG+P+ E+ +A + C +AVGTPGR+K L+ G L+ +A + VLD AD L+ D+ WI P+DKQV+A S PK EA
Sbjct: 46 HPSPIQLEAI---PAGRCGTDLVIQAKSGTGKTLVFTVIALEMLID--------------------------------IKTLQVLIMAPTREIATQICDVIKTVGSSFTKLRCASFIGGLPLEED-KAKSLHCQIAVGTPGRIKQLIDIGYLRTNAVRLFVLDEADELLRATCTGDIDWIFQTLPEDKQVIAASATYPKELEA 212
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Match: A0A3M6V3Y6_POCDA (RNA helicase n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V3Y6_POCDA) HSP 1 Score: 103 bits (258), Expect = 9.940e-19 Identity = 67/219 (30.59%), Postives = 102/219 (46.58%), Query Frame = 0
Query: 710 PVLLTALEANGVTHPTPLQEAVWKGGRGRARADLIVHGRPGDETATAFCVPVLERV-LERYPTSLAPKGVSAEMSARAPTSEAAIPPPESQVYELVALVLTRTREMAADIAETLARLGQNITSLSVATLIGGVPVAENHRALADGCNVAVGTPGRVKFLMKEGALKVSASKTLVLDSADWLMAPVFEEDVGWIAARFPKDKQVLAFSGADPKTYEAGLT 927
P +L L ++G P+P+Q GR DLI + G F V LE V L+ T + L+L TRE+A I + + +G + +L IGG+PV E+ +AL C++AVGTPGRVK+L++ LK + + +LD AD L+ F+E + W+ + P +KQ++AFS P+ LT
Sbjct: 34 PDVLKGLSSSGFERPSPIQLKAIP--LGRCGLDLIAQAKSGTGKTCVFSVIALESVQLDSSKTQV--------------------------------LILAPTREIAVQIKDVITAIGSEMKNLVCHVFIGGLPVDEDKKALRKSCHIAVGTPGRVKYLIENHLLKTESVRLFILDEADKLLEDNFQEQINWVFSSLPSNKQMMAFSATYPEYLAKHLT 218 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig86.16251.1 ID=prot_C-linearis_contig86.16251.1|Name=mRNA_C-linearis_contig86.16251.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1203bpback to top |