prot_C-linearis_contig86.16247.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig86.16247.1
Unique Name	prot_C-linearis_contig86.16247.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	339

Homology

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: D7FZS6_ECTSI (Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZS6_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 5.190e-238
Identity = 329/338 (97.34%), Postives = 332/338 (98.22%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVAKKKK 338
            MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMY EPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKS NMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVTFAP MLDTEVKSVEMHHE+LPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGA+ FNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEV+ KKK
Sbjct:  102 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYGEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSTNMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGCLKPGMVVTFAPCMLDTEVKSVEMHHEALPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGASAFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVSTKKK 439

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: A0A836CC12_9STRA (Elongation factor 1-alpha n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC12_9STRA)

HSP 1 Score: 581 bits (1498), Expect = 1.820e-206
Identity = 289/336 (86.01%), Postives = 305/336 (90.77%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVAKK 336
            MITGTSQADVA+LVVASGVGEFEAGISK+GQTREHALLA+TLGVKQMIVCINKMDDSSVMY E RY EIKEEV  YLKKVGYKP KIPFVPISGWAGDNMI++S NMPWYKGP+LLEALD+   P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVV FAP  + TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVKDIRRG VAGDSK DPP GAA F+AQVIVMNHPGQI NGY+PVLDCHTAHVACKF  ITQKMDRRSGKVMEENPKF+K GDA MV +EPSKP+CVESF +YPPLGRFAVRDMRQTVAVGVIKSVEKK  A K
Sbjct:  102 MITGTSQADVAMLVVASGVGEFEAGISKDGQTREHALLAYTLGVKQMIVCINKMDDSSVMYGEARYNEIKEEVTNYLKKVGYKPVKIPFVPISGWAGDNMIERSENMPWYKGPFLLEALDSCMPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFAPTGVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPVGAANFHAQVIVMNHPGQIGNGYSPVLDCHTAHVACKFAHITQKMDRRSGKVMEENPKFIKNGDAAMVTLEPSKPLCVESFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKVEAAK 437

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: A0A485KD22_9STRA (Elongation factor 1-alpha n=33 Tax=Eukaryota TaxID=2759 RepID=A0A485KD22_9STRA)

HSP 1 Score: 572 bits (1475), Expect = 6.890e-203
Identity = 284/336 (84.52%), Postives = 301/336 (89.58%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVAKK 336
            MITG S+AD A+LVVASGVGEFEAGISK+GQTREHALLAFTLGV+QMIV INKMDDSSVMY E RY EIKEEV  YLKKVGYKPAKIPFVPISGW GDNMI+KSANMPWYKGPYLLEALD +  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVV F P  L TEVKSVEMHHES+PEAVPGDNVGFNVKN+SVK++RRG+VA DSK DP KG   F AQVIV+NHPGQI NGY+PVLDCHTAHVACKFKEITQKMDRRSGKV+EENPKFVK+GDACMV +EP+K M VESFQEYPPLGRFAVRDMRQTVAVGVI SV KKE   K
Sbjct:  102 MITGPSKADAAILVVASGVGEFEAGISKDGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGESRYNEIKEEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSANMPWYKGPYLLEALDGLNPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVVFGPSGLSTEVKSVEMHHESMPEAVPGDNVGFNVKNISVKELRRGFVASDSKNDPAKGTETFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITQKMDRRSGKVLEENPKFVKSGDACMVILEPTKGMTVESFQEYPPLGRFAVRDMRQTVAVGVIHSVIKKEAGGK 437

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: H3G8M4_PHYRM (Elongation factor 1-alpha n=42 Tax=Peronosporaceae TaxID=4777 RepID=H3G8M4_PHYRM)

HSP 1 Score: 572 bits (1474), Expect = 8.470e-203
Identity = 282/332 (84.94%), Postives = 299/332 (90.06%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKE 332
            MITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGVKQMIV INKMDDSSVMY + RY EIK EV  YLKKVGYKPAKIPFVPISGW GDNMI+KS NMPWYKGPYLLEALDT+  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMV TF PV L TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVK++RRG+VA DSK DP KG   F AQVIV+NHPGQI NGY+PVLDCHTAHVACKFKEIT+KMDRRSGKV+E  PKFVK+GDACMV +EPSKPM VESF +YPPLGRFAVRDMRQTVAVGVIKSV KK+
Sbjct:  102 MITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIEKSGNMPWYKGPYLLEALDTLNAPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQDFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITEKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFSQYPPLGRFAVRDMRQTVAVGVIKSVNKKD 433

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: W2Q9P2_PHYPN (Elongation factor 1-alpha n=70 Tax=Stramenopiles TaxID=33634 RepID=W2Q9P2_PHYPN)

HSP 1 Score: 575 bits (1483), Expect = 3.840e-201
Identity = 285/336 (84.82%), Postives = 300/336 (89.29%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVAKK 336
            MITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGVKQMIV INKMDDSSVMY + RY EIK EV  YLKKVGYKPAKIPFVPISGW GDNMID+S NMPWYKGPYLLEALD +  P RP DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMV TF PV L TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVK++RRGYVA DSK DP KG   F AQVIV+NHPGQI NGY+PVLDCHTAHVACKFKEIT+KMDRRSGKV+E  PKFVK+GDACMV +EPSKPM VESFQEYPPLGRFAVRDMRQTVAVGVIKSV KK+ + K
Sbjct:  303 MITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMIVAINKMDDSSVMYGQARYEEIKNEVTTYLKKVGYKPAKIPFVPISGWEGDNMIDRSTNMPWYKGPYLLEALDNLNPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGTQDFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITEKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIKSVTKKDASAK 638

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: Q5EVA5_9STRA (Elongation factor 1 alpha (Fragment) n=2 Tax=Oomycota TaxID=4762 RepID=Q5EVA5_9STRA)

HSP 1 Score: 563 bits (1451), Expect = 4.940e-201
Identity = 280/326 (85.89%), Postives = 293/326 (89.88%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIK 326
            MITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGV+QMIV INKMDDSSVMY + RY EIK EV  YLKKVGYKPAK PFVPISGW GDNM++KSANMPWYKGPYLLEALD +  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPG +VTF PV L TEVKSVEMHHESL EA PGDNVGFNVKNVSVK++RRG+VA DSK DP KG   F AQVIV+NHPGQI NGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEE PKFVK+GDACMV +EPSKPM VESFQEYPPLGRFAVRDMRQTVAVGVIK
Sbjct:    6 MITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVRQMIVAINKMDDSSVMYGQARYEEIKNEVTAYLKKVGYKPAKTPFVPISGWEGDNMVEKSANMPWYKGPYLLEALDGLNPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGTIVTFGPVGLSTEVKSVEMHHESLLEAHPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTENFTAQVIVLNHPGQIGNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEEFPKFVKSGDACMVILEPSKPMTVESFQEYPPLGRFAVRDMRQTVAVGVIK 331

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: A0A7S3K0G6_9STRA (Elongation factor 1-alpha n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0G6_9STRA)

HSP 1 Score: 566 bits (1459), Expect = 1.810e-200
Identity = 278/332 (83.73%), Postives = 298/332 (89.76%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKE 332
            MITGTSQADVA+LV+ S VG FEAGISK+GQTREHALLAFTLGVKQMIV +NKMDD SV Y E RY EIK+EV+ YLKKVGYKP KIPFVPISGW GDNMIDKSANMPWYKGP+LLEALD +  P RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVTFAP  L TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVK++RRGYVA DSK DP KGAA F AQVI+MNHPGQIS GY+PVLDCHTAHVACKF E+ QKMDRRSGKVMEENPKFVK+GDACM  + P+KP+CVESF +YPPLGRFAVRDMRQTVAVGVIK+V K E
Sbjct:  102 MITGTSQADVAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVAMNKMDDVSVKYGEARYKEIKQEVSSYLKKVGYKPMKIPFVPISGWMGDNMIDKSANMPWYKGPFLLEALDNVNPPKRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPTQLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKELRRGYVASDSKNDPAKGAASFYAQVIIMNHPGQISAGYSPVLDCHTAHVACKFSELNQKMDRRSGKVMEENPKFVKSGDACMTTLVPTKPLCVESFADYPPLGRFAVRDMRQTVAVGVIKNVTKAE 433

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: M4BSJ0_HYAAE (Elongation factor 1-alpha n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BSJ0_HYAAE)

HSP 1 Score: 567 bits (1461), Expect = 3.840e-200
Identity = 280/336 (83.33%), Postives = 299/336 (88.99%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVAKK 336
            MITGTSQAD A+LVVASGVGEFEAGISK GQTREHALLAFTLGVKQM+V INKMDDSSVMY + RY EIK EV  YLKKVGYKPAKIPFVPISGW GDNMI++S NM WYKGPYLLEALD +  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +KPGMV TF PV L TEVKSVEMHHESLPEA+PGDNVGFNVKNVSVK++RRG+VA DSK DP KG   F AQVIV+NHPGQI NGY+PVLDCHTAHVACKFKEIT+KMDRRSGKV+E  PKFVK+GDACMV +EPSKPM VESF EYPPLGRFAVRDMRQTVAVGVIKSV KKE + K
Sbjct:  146 MITGTSQADCAILVVASGVGEFEAGISKEGQTREHALLAFTLGVKQMVVAINKMDDSSVMYGQARYEEIKSEVTTYLKKVGYKPAKIPFVPISGWEGDNMIERSPNMAWYKGPYLLEALDNLNPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVATFGPVGLSTEVKSVEMHHESLPEALPGDNVGFNVKNVSVKELRRGFVASDSKNDPAKGTQDFTAQVIVLNHPGQIGNGYSPVLDCHTAHVACKFKEITEKMDRRSGKVLETAPKFVKSGDACMVILEPSKPMTVESFAEYPPLGRFAVRDMRQTVAVGVIKSVNKKEASAK 481

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BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: F0Y4T9_AURAN (Elongation factor 1-alpha n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4T9_AURAN)

HSP 1 Score: 565 bits (1455), Expect = 7.330e-200
Identity = 277/332 (83.43%), Postives = 297/332 (89.46%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKE 332
            MITGTSQADVA+LV+ S VG FEAGISK+GQTREHALLAFTLGVKQMIV  NKMDD SV Y E RY EIK+EV+ YLKKVGYKP KIPF+PISGWAGDNMIDKS NM WYKGPYLLEALD    P RPT+KPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVTFAP  L TEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKD+RRG+V GDSK+DPPKGA  F AQVI+MNHPGQIS GY+PVLDCHTAHVACKF+E+ QKMDRRSGKV+EENPKFVK+GDACM  + P+KP+CVESF EYPPLGRFAVRDMRQTVAVGVIK+V K E
Sbjct:  102 MITGTSQADVAILVIDSSVGGFEAGISKDGQTREHALLAFTLGVKQMIVACNKMDDVSVKYGEARYKEIKQEVSGYLKKVGYKPMKIPFIPISGWAGDNMIDKSTNMGWYKGPYLLEALDNCNPPKRPTEKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAQLSTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDLRRGFVCGDSKQDPPKGADTFFAQVIIMNHPGQISAGYSPVLDCHTAHVACKFQELNQKMDRRSGKVLEENPKFVKSGDACMATLAPTKPLCVESFAEYPPLGRFAVRDMRQTVAVGVIKTVTKSE 433

[Close]

BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Match: W7T3J7_9STRA (Elongation factor 1-alpha n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3J7_9STRA)

HSP 1 Score: 563 bits (1450), Expect = 3.930e-199
Identity = 276/337 (81.90%), Postives = 299/337 (88.72%), Query Frame = 0

Query:    1 MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVCINKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNMIDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDCHTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVESFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVAKKK 337
            MITGTSQADVA+L+VASG GEFEAGI K+GQTREHALLAFTLGVKQMIVC+NKMDDSSV Y E R+ EIKEEV+ YLKKVGYKPAK+PF+PISGW GDNMID+S NM WYKGP LLEALD +  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG LKPGMVVT AP M+ TEVKSVEMHHES+ EA+PGDNVGFNVKNVSVK+IRRGYVAGDSK+DPP GAA F AQVIVMNHPGQI NGY PVLDCHTAHVACKF EIT+K+DRR+G V E NPKFV++GD C V +EPSKPM VESF EYPPLGRFAVRDMRQTVAVGV+KSV+KK    KK
Sbjct:  102 MITGTSQADVAILIVASGTGEFEAGIGKDGQTREHALLAFTLGVKQMIVCVNKMDDSSVNYGEARFNEIKEEVSNYLKKVGYKPAKVPFIPISGWNGDNMIDRSTNMAWYKGPTLLEALDNINPPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTIAPAMVTTEVKSVEMHHESMAEALPGDNVGFNVKNVSVKEIRRGYVAGDSKKDPPAGAANFVAQVIVMNHPGQIQNGYCPVLDCHTAHVACKFAEITEKIDRRTGAVTEANPKFVQSGDGCYVTLEPSKPMVVESFTEYPPLGRFAVRDMRQTVAVGVVKSVDKKATDSKK 438

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot

BLAST of mRNA_C-linearis_contig86.16247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FZS6_ECTSI	5.190e-238	97.34	Elongation factor 1-alpha n=2 Tax=Ectocarpus TaxID...	[more]
A0A836CC12_9STRA	1.820e-206	86.01	Elongation factor 1-alpha n=2 Tax=Tribonema minus ...	[more]
A0A485KD22_9STRA	6.890e-203	84.52	Elongation factor 1-alpha n=33 Tax=Eukaryota TaxID...	[more]
H3G8M4_PHYRM	8.470e-203	84.94	Elongation factor 1-alpha n=42 Tax=Peronosporaceae...	[more]
W2Q9P2_PHYPN	3.840e-201	84.82	Elongation factor 1-alpha n=70 Tax=Stramenopiles T...	[more]
Q5EVA5_9STRA	4.940e-201	85.89	Elongation factor 1 alpha (Fragment) n=2 Tax=Oomyc...	[more]
A0A7S3K0G6_9STRA	1.810e-200	83.73	Elongation factor 1-alpha n=1 Tax=Aureoumbra lagun...	[more]
M4BSJ0_HYAAE	3.840e-200	83.33	Elongation factor 1-alpha n=3 Tax=Hyaloperonospora...	[more]
F0Y4T9_AURAN	7.330e-200	83.43	Elongation factor 1-alpha n=3 Tax=Pelagomonadales ...	[more]
W7T3J7_9STRA	3.930e-199	81.90	Elongation factor 1-alpha n=2 Tax=Monodopsidaceae ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 334..338
None	No IPR available	GENE3D	3.40.50.300		coord: 1..123 e-value: 3.5E-42 score: 145.7
None	No IPR available	GENE3D	2.40.30.10		coord: 222..329 e-value: 4.2E-52 score: 176.9
None	No IPR available	GENE3D	2.40.30.10		coord: 127..219 e-value: 3.5E-42 score: 144.4
None	No IPR available	PANTHER	PTHR23115	TRANSLATION FACTOR	coord: 1..334
None	No IPR available	PANTHER	PTHR23115:SF236	ELONGATION FACTOR 1-ALPHA 1	coord: 1..334
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 222..328 e-value: 8.8E-44 score: 148.4
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 147..212 e-value: 3.5E-14 score: 52.9
IPR000795	Transcription factor, GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 1..120 e-value: 1.2E-15 score: 57.6
IPR000795	Transcription factor, GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 1..129 score: 24.599
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 130..259
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..148
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 226..328

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig86	contig	C-linearis_contig86:599621..600965 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig86.16247.1	mRNA_C-linearis_contig86.16247.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig86 598458..600965 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig86.16247.1 ID=prot_C-linearis_contig86.16247.1|Name=mRNA_C-linearis_contig86.16247.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=339bp
MITGTSQADVAVLVVASGVGEFEAGISKNGQTREHALLAFTLGVKQMIVC
INKMDDSSVMYCEPRYTEIKEEVAIYLKKVGYKPAKIPFVPISGWAGDNM
IDKSANMPWYKGPYLLEALDTMKEPTRPTDKPLRLPLQDVYKIGGIGTVP
VGRVETGALKPGMVVTFAPVMLDTEVKSVEMHHESLPEAVPGDNVGFNVK
NVSVKDIRRGYVAGDSKRDPPKGAAIFNAQVIVMNHPGQISNGYAPVLDC
HTAHVACKFKEITQKMDRRSGKVMEENPKFVKTGDACMVNMEPSKPMCVE
SFQEYPPLGRFAVRDMRQTVAVGVIKSVEKKEVAKKKK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004160	Transl_elong_EFTu/EF1A_C
IPR004161	EFTu-like_2
IPR000795	TF_GTP-bd_dom
IPR009000	Transl_B-barrel_sf
IPR027417	P-loop_NTPase
IPR009001	Transl_elong_EF1A/Init_IF2_C