prot_C-linearis_contig86.16238.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig86.16238.1
Unique Nameprot_C-linearis_contig86.16238.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length556
Homology
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: A0A6H5KXP9_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXP9_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 2.350e-80
Identity = 130/151 (86.09%), Postives = 137/151 (90.73%), Query Frame = 0
Query:  402 SWYKNDTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRERLRRLPGQRDSPGGIARFVQCARGD 552
            S YKNDTISMADLALTLVST HPR MPVFLARVQAIQKKRKQ+PLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAV   DFARAAKVISGKELSPECVWLVFK+FD GADG+L+HDELIEAT  RLR LPG+R+ P  +ARFVQC RGD
Sbjct:   78 SRYKNDTISMADLALTLVSTSHPRKMPVFLARVQAIQKKRKQIPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVTATDFARAAKVISGKELSPECVWLVFKMFDSGADGRLEHDELIEATHHRLRSLPGRREFPNSVARFVQCVRGD 228          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: A0A6H5L3M7_9PHAE (EF-hand domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M7_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 1.720e-75
Identity = 125/151 (82.78%), Postives = 139/151 (92.05%), Query Frame = 0
Query:   94 AASAIVCARQQAGER-EED-VCLCKGKISEKDSLQDYARRLQRLRSLRDIFEEYATVNADDVGQLMTCGDFLRAMLCYKYVRVDDRELKRRCARYLNPLLGDDHGLISFDEFCFLLSLVSIPAGLLDVAFAAVDADGSGTIDVGELDRLVK 242
            AA+A++CA+Q+   R EED VCLCKGK S  DSL+DYARRLQRLRSLRDIFEEYATV+ADDVG+LMTCGDFLRAMLCYKYVRVD +ELKRRCARY+NPLLGDDH LISFDEFCFLL+L+SIPAGLLDVAFAA DADGSGTID+ EL+RLVK
Sbjct:    5 AAAALLCAQQELQPRWEEDCVCLCKGKTSATDSLEDYARRLQRLRSLRDIFEEYATVDADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHSLISFDEFCFLLNLLSIPAGLLDVAFAAADADGSGTIDMHELERLVK 155          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: D7G3D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D0_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 1.370e-49
Identity = 88/105 (83.81%), Postives = 95/105 (90.48%), Query Frame = 0
Query:  100 CARQQAGER--EEDVCLCKGKISEKDSLQDYARRLQRLRSLRDIFEEYATVNADDVGQLMTCGDFLRAMLCYKYVRVDDRELKRRCARYLNPLLGDDHGLISFDE 202
            CA+Q+   R  E+ VCLCKGK S  DSL+DYARRLQRLRSLRDIFEEYATVNADDVG+LMTCGDFLRAMLCYKYVRVD +ELKRRCARY+NPLLGDDHGLISFDE
Sbjct:   89 CAQQELQPRWEEDGVCLCKGKASAADSLEDYARRLQRLRSLRDIFEEYATVNADDVGKLMTCGDFLRAMLCYKYVRVDAKELKRRCARYINPLLGDDHGLISFDE 193          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: L8H3D2_ACACA (Calcium binding atopyrelated autoantigen 1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3D2_ACACA)

HSP 1 Score: 80.1 bits (196), Expect = 1.540e-12
Identity = 95/422 (22.51%), Postives = 162/422 (38.39%), Query Frame = 0
Query:  128 YARRLQRLRSLRDIFEEYATVNADDVGQLMTCGDFLRAMLCYKYVRVDDRELKRRCARYLNPLLGDDHGLISFDEFCFLLSLVSIPAGLLDVAFAAVDADGSGTIDVGELDRLVKRLAPSESGGGNSTAGESDGDSNGNGEEQRLTGHKRLEEAWFPRKARDDESGXXXXXXXXXDGDKGVPREKFLAFVRDLRMDVKTVECRLYSRSIRVEEEDEIKPPTVRRGWREWFSSSVLGRGGTSGGRSSGSEAGDGXXXXXXXXXXXXXXXXXXXXXSWYKNDTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRERLRR-LPGQRDSPGGIARFVQC 548
            Y  +++   +   IF  +ATV  +     MT  DF  A+L   +    ++   +R   ++     D   LISF E+ F  +L+S+P   L VAF   D DGSG I   E  R V R+   ES  G+                Q+ T  K +E++                     DG K +   +F  F++ L   V  +E   Y                                             G+G                            I+     ++++    P+D+P FL RV+++  ++ ++   D +  +  L+    ++  A+ +Y++          DF RA K ISG +L P  + +++ + D+  +GKLDH+EL+E   +R+ + +   RD   G+ARFV C
Sbjct:   48 YNDKIKNWSTPEKIFNVFATVRKNGES-FMTVEDFCDAILPADHRPPSEKGKIKRIPDFIRFADLDGDELISFGEYSFFTTLLSLPEEHLKVAFQMFDLDGSGAISKQEF-RKVLRVLRKESPLGS----------------QQTTHKKEVEKSGI------------YAHFFGLDGKKELTYTEFENFIKSLHQGVLQLEFDRYD------------------------------------------SKGEGK---------------------------ITARAFGMSVIGYVDPKDLPSFLTRVESLDNRKGELSFEDFVNFNRALKK-LPEIGLAVKLYAQG---------DFGRAVKAISGVDLKPVQIDVIYHVLDKDGNGKLDHNELVEVMAKRVEKGMAHHRDV--GVARFVNC 358          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: A0A0P1AS55_PLAHL (Calciumbinding atopy-related autoantigen n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AS55_PLAHL)

HSP 1 Score: 74.3 bits (181), Expect = 1.870e-10
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = 0
Query:  405 KNDTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRERLRRLPGQRDSP--GGIARFVQCAR 550
            K  ++S+ D ALTL+S   P  +P +L RVQA+ +    V   D    H  ++ +  D++ AL +         +  ADF RA +V SG ELS   V L F+IFD  A G L+  EL++   E   ++  ++DS     + +F  C R
Sbjct:  305 KQQSMSVHDFALTLISCFDPEKLPPYLERVQALTESDGAVTWDDFFTFHFNVQSNLTDIKAALELIGVDE----IKEADFTRAVRVASGTELSSPVVRLAFRIFDENASGTLNQSELLKVL-EMRNKVQLKQDSKLESRLKKFWHCVR 447          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: A0A2D4BZW7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZW7_PYTIN)

HSP 1 Score: 74.3 bits (181), Expect = 1.940e-10
Identity = 47/142 (33.10%), Postives = 70/142 (49.30%), Query Frame = 0
Query:  409 ISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRERLRRLPGQRDSPGGIARFVQCAR 550
            IS+ D A+TLVS   P  +  +L RV+A+    + V   D    H  ++++  D+  A  +         +  ADF RAA+V+SG ELS   V L F++FD   +G LD  EL++    R      QR     + RFV C +
Sbjct:  320 ISVHDFAITLVSGFDPDRLAPYLERVEALNASEELVTWEDFYKFHANVQNNLADIXLAFDLTHAEE----ITEADFIRAARVVSGVELSFPVVQLAFRVFDSNENGTLDQSELLKVLETRSTIELTQRPPENKLQRFVSCVK 457          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: A0A329SJ15_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SJ15_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.960e-10
Identity = 49/147 (33.33%), Postives = 73/147 (49.66%), Query Frame = 0
Query:  405 KNDTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRERLR-RLPGQRDSPGGIARFVQCAR 550
            K  T+S+ D ALTL+S   P  +P +L RVQ +      V   +    H  ++ +  D++ A  +    +    +  ADF RAA V+SG ELS   V L F+IFD  A+G LDH EL +    R   +L  + DS   + +   C +
Sbjct:  318 KQQTMSVHDFALTLISCFDPEKLPPYLDRVQELNASDGVVMWDEFFAFHFNVQCNLPDIKLAFEL----TGADEITEADFVRAAHVVSGVELSSPVVQLAFRIFDENANGTLDHSELFKILEMRNTVQLKQEFDSGSRLEKLWHCVK 460          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: A0A5D6XI39_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XI39_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.110e-10
Identity = 47/145 (32.41%), Postives = 76/145 (52.41%), Query Frame = 0
Query:  407 DTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRERLRRLPGQRDSPGG-IARFVQCAR 550
            + +S+ D A+TLVS   P  +  +L R+QA+   ++ V   D    H  ++ + +D++ A  +   A     +  ADF RAA+V+SG ELS   V L F++FD   +G LD  EL++   E  R +  ++  P   + RF  C R
Sbjct:  291 EVVSVHDFAITLVSCFDPERLAPYLERLQALNASQELVTWDDFYKFHFNVQSNLEDIKLAFDLIGAAE----ITEADFIRAARVVSGVELSFPVVQLAFRVFDGNDNGTLDQTELLKVL-EMRRDIELEKKQPATYVKRFWSCVR 430          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: A0A484EGG9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGG9_BRELC)

HSP 1 Score: 72.4 bits (176), Expect = 6.990e-10
Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 0
Query:  405 KNDTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRERLR-RLPGQRDSPGGIARFVQCAR-GDSVK 555
            K  T+S+ D ALTL+S   P+ +P +L RVQA+      V   +    H  ++ +  D++ A  +    +    +  A+F RAA+++SG ELS   V L F+IFD   +G LD  EL E  + R    L  +      + +  QC + GD  +
Sbjct:  276 KQQTVSVHDFALTLISGHDPKKLPPYLDRVQALNACDDVVTWDEFCTFHFNVQHNLPDIKLAFEL----TGADEITEAEFIRAARIVSGVELSSPVVELAFRIFDENGNGTLDRSELFEGLKMRNTVELKQKSSGRSQLGKLWQCVKAGDKSR 424          
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Match: G4ZSQ1_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZSQ1_PHYSP)

HSP 1 Score: 71.2 bits (173), Expect = 1.520e-9
Identity = 45/124 (36.29%), Postives = 62/124 (50.00%), Query Frame = 0
Query:  405 KNDTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDALLLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPECVWLVFKIFDRGADGKLDHDELIEATRER 528
            K  T+S+ D ALTLVS   P  +  +L RVQ +      +   +    H  ++ H  D++ A  +    +    V  ADF RAA V+SG ELS   V L F+IFD  A+G LD  EL +    R
Sbjct:  261 KEQTMSVHDFALTLVSCFDPDKLSPYLERVQELNASEGVITWEEFFAFHFNVQSHLPDIKLAFEL----TGADEVTEADFIRAAHVVSGVELSSPVVQLAFRIFDDDANGTLDQSELFKVLEMR 380          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5KXP9_9PHAE2.350e-8086.09EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L3M7_9PHAE1.720e-7582.78EF-hand domain-containing protein (Fragment) n=1 T... [more]
D7G3D0_ECTSI1.370e-4983.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
L8H3D2_ACACA1.540e-1222.51Calcium binding atopyrelated autoantigen 1, putati... [more]
A0A0P1AS55_PLAHL1.870e-1033.11Calciumbinding atopy-related autoantigen n=1 Tax=P... [more]
A0A2D4BZW7_PYTIN1.940e-1033.10Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A329SJ15_9STRA1.960e-1033.33Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A5D6XI39_9STRA3.110e-1032.41EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
A0A484EGG9_BRELC6.990e-1031.37Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4ZSQ1_PHYSP1.520e-936.29Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 216..244
e-value: 0.0015
score: 27.8
coord: 500..528
e-value: 21.0
score: 7.1
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 220..241
e-value: 5.0E-4
score: 19.4
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 476..525
e-value: 0.01
score: 15.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 212..247
score: 10.692
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 496..531
score: 9.13
NoneNo IPR availableGENE3D1.10.238.10coord: 131..283
e-value: 7.0E-8
score: 34.0
NoneNo IPR availablePANTHERPTHR12294:SF1CALCIUM UPTAKE PROTEIN 1, MITOCHONDRIALcoord: 405..548
NoneNo IPR availablePANTHERPTHR12294:SF1CALCIUM UPTAKE PROTEIN 1, MITOCHONDRIALcoord: 90..333
IPR039800Calcium uptake protein 1/2/3PANTHERPTHR12294EF HAND DOMAIN FAMILY A1,A2-RELATEDcoord: 90..333
IPR039800Calcium uptake protein 1/2/3PANTHERPTHR12294EF HAND DOMAIN FAMILY A1,A2-RELATEDcoord: 405..548
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 225..237
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 134..244
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 452..524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:534298..539511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16238.1mRNA_C-linearis_contig86.16238.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig86 534266..539795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig86.16238.1 ID=prot_C-linearis_contig86.16238.1|Name=mRNA_C-linearis_contig86.16238.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=556bp
MLPNTTVPTGRALLRLAVAGNAGSGRHAAAACTNRRRIGTTASSDGPSDV
HCANLLARHTANGHRSGRGSSRGSSRGSSEGGPSSAWSLSAASAASAIVC
ARQQAGEREEDVCLCKGKISEKDSLQDYARRLQRLRSLRDIFEEYATVNA
DDVGQLMTCGDFLRAMLCYKYVRVDDRELKRRCARYLNPLLGDDHGLISF
DEFCFLLSLVSIPAGLLDVAFAAVDADGSGTIDVGELDRLVKRLAPSESG
GGNSTAGESDGDSNGNGEEQRLTGHKRLEEAWFPRKARDDESGGGGGGGG
GGDGDKGVPREKFLAFVRDLRMDVKTVECRLYSRSIRVEEEDEIKPPTVR
RGWREWFSSSVLGRGGTSGGRSSGSEAGDGDEGGGGGGGEEEDDAAAAGW
WSWYKNDTISMADLALTLVSTCHPRDMPVFLARVQAIQKKRKQVPLRDAL
LLHEVLEDHAQDLEDALGMYSKASSGGAVNPADFARAAKVISGKELSPEC
VWLVFKIFDRGADGKLDHDELIEATRERLRRLPGQRDSPGGIARFVQCAR
GDSVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR039800MICU1/2/3
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair