prot_C-linearis_contig86.16217.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig86.16217.1
Unique Nameprot_C-linearis_contig86.16217.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length737
Homology
BLAST of mRNA_C-linearis_contig86.16217.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 532 bits (1370), Expect = 4.730e-176
Identity = 415/765 (54.25%), Postives = 457/765 (59.74%), Query Frame = 0
Query:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPDVVTNLAFISVSAVGALFLCFHITREYYQSGYWAILQTPKHVLNAVILHLVARALRWHLDRLLGLNFAARDQALPDFFAASVQEGATDGRDDGNXXXXXXXXXNKAAVLW------------------PWQSSQNQSRSTQQEPRVSTSPFAPHGWXXXXXXXXXXXDLDVFRGH-------------------------------GRSHSADGAAV-ASAGGESGSRNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFPDLFGACRPG--QNNHRRGRMPSSPPSTPVATRKEPTRPSSLDRNRAGGGRRGRLSAGRRNLSPETPHTAAHRWIQEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREGGRRERGETG------GEDEEGEQDGETGVGTAMAXXXXXXXXXXXXXXXXXXXDG--------ASRRWKPIDKLSRALGSTRRRASMRTGGLGRDGAPPGNEPRLNFFTEVDLDELLHSTFFIKMCDDASWLYVEDHPYVPELNWLLTLWGGYKITPRFQGEVKQNEAHRMLFQCESGRHQGNIRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPQGADGVLVGDERGRVVIWSRRINGYVSWNGSRFTHVQGREGATVFMLQRMASS 699
            MALVDTQGFVMAVDRSLFGPQGRRWIERKLP+V TNLAF++VSA GA  L FHITREYY SGYWAILQTPKH+LNAV+LHLVARALRWH+DR+LG+NFAA D+ALPDFF ++  +G         XXXXXXXXX                         P Q  Q + R + +E  +    F   GW  XXXXXXXXX                                       GRS S+      A  G E G R+                                                        XXXXXXXX           FPDLFGACRP   + + RR R  SSPPS+P AT  E TRPSS+ RNR         S  RR LS E P TAA RW+ E G                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +  G     G  G      G+ EE E  G  G  T++AXXXXXXXXXX         DG        ++ RW+ IDKLSRALGSTRRR S R GG  R     G+E ++NFFTE DLDELLHSTFFIKMCDDASWLYVEDHP+ PELNWLL+LWGGYKI PRFQGEVKQNEAHRMLFQ E+GRH+ ++RIRSRATNTFLFFLG+KQPLTWVAWDRDVVGG+WEDLKLEWVGKPQG DGVLVGDERGRVVI SR + GYVSWNGSRFTHV GREGATVFMLQRMA S
Sbjct:    1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNLAFVAVSAFGACLLVFHITREYYTSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEALPDFFGSTTLDGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPPQPKQGR-RDSVEESTIDQEQF---GWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLGRSASSLSLPESARPGWEQGRRS----------------------WRRSSNRLDGSGLADGFAGSDKERGENAAGALDDXXXXXXXXNHSRGDREKHTFPDLFGACRPSHHERHRRRERSLSSPPSSPSATL-ESTRPSSVGRNRXXXXXXXXPSPRRRRLSLEVPRTAADRWVDEGGNYGAGKEQRRAAGADGAARQSGCASDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPQ-VGASAAAGAAGEVEAGKGDVEEKEGGGRNGAKTSVAXXXXXXXXXXTGLSGSWR-DGXXXXXXXXSNSRWRSIDKLSRALGSTRRRTS-RQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS 735          
BLAST of mRNA_C-linearis_contig86.16217.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.190e-74
Identity = 211/357 (59.10%), Postives = 231/357 (64.71%), Query Frame = 0
Query:  286 FPDLFGACRPG--QNNHRRGRMPSSPPSTPVATRKEPTRPSSLDRNRAGGGRRGRLSAGRRNLSPETPHTAAHRWIQEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKR-EGGRRERGETGGEDEEGEQDGETGVGTAMAXXXXXXXXXXXXXXXXXXXD---------------GASRRWKPIDKLSRALGSTRRRASMRTGGLGRDGAPPGNEPRLNFFTEVDLDELLHSTFFIKMCDDASWLYVEDHPYVPELNWLLTLWGGYKITPRFQGEVKQNEAHRMLFQCESGRHQGNIRIRSRATNTFLFFLGVKQPLTWV 624
            FPDLFGACRP   + + RR R  SSPPS+P AT  EPTRPSS+ RNR            RR LS E P TAA RW+ E G                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      + G           E GE+           XXXXXXXXXXXXXXXX   +                +SRRW+ IDKLSRALGSTRRR S R GG  R     G+E ++NFFTE DLDELLHSTFFIKMCDDASWLYVEDHP+ PELNWLL+LWGGYKI PRFQGEVKQNEAHRMLFQ E+GRH+G++RIRSRATNTFLFFLG+KQPLTWV
Sbjct:  105 FPDLFGACRPSHHERHRRRERSLSSPPSSPSATL-EPTRPSSVGRNRXXXXXXXXXXXXRRRLSLEVPRTAADRWVDEGGNYGAGEEQQRVAGAGGAARQIGCTSDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSLPQAGASXXXXXXXXXETGEEHXXXXXXXXXXXXXXXXXXXXXXXXXXSATELSGSGRDVGGSGGGRSSSRRWRSIDKLSRALGSTRRRTS-RQGGAARGEGGEGSEQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459          
BLAST of mRNA_C-linearis_contig86.16217.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.070e-42
Identity = 89/203 (43.84%), Postives = 123/203 (60.59%), Query Frame = 0
Query:  497 STRRRASMRTGGLGRDGAPPGNEPRLNFFTEVDLDELLHSTFFIKMCDDASWLYVEDHPYVPE----LNWLLTLWG-GYKITPRFQGEVKQNEAHRMLFQCESGRHQGNIRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPQGADGVLVGDERGRVVIWSRRINGYVSWNGSRFTHVQGREGATVFMLQ 694
            +T RR   R GG+ R  +  G + +   FT     EL+ S FF+++ DD SW+YVE   Y P+    L W + L+  GYK+  R+ G+V  ++A+RMLFQCE GR  G++ +RSR TNT LF LG+++P T VAWDR+V GGDWED+++EW             +  G VVI  +R  GY+ W G RF HV  R+ A+ FMLQ
Sbjct:  319 ATARRRRRRHGGIERGRSEGGLDLQPYLFTRATAHELMDSLFFMRVVDDDSWVYVEHDLYQPQEGAGLGWAMNLFHRGYKVGVRYAGDVDPHDANRMLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQ 510          
BLAST of mRNA_C-linearis_contig86.16217.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.680e-37
Identity = 76/182 (41.76%), Postives = 117/182 (64.29%), Query Frame = 0
Query:  521 RLNFFTEVDLDELLHSTFFIKMCDD-ASWLYVEDHPYVPE----LNWLLTLWG-GYKITPRFQGEVKQNEAHRMLFQCESGRHQGNIRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPQGADGVLVGDERGRVVIWSRRINGYVSWNGSRFTHVQGREGATVFMLQRM 696
            R   FT     ELL S FFIK+ D+  +W++VED  +       L W ++L+  GY++  R+ G+V  ++AHR++FQCE GR  G++RIRSR +NT+LF LG+++PLT VAWDR+V GGDWED+++ W+ +          ++ GRV+I  +   GY+ W G++F H   ++ A+ FMLQ +
Sbjct:  428 RPRHFTAETAHELLDSMFFIKLVDEEGAWMFVEDDLHESREGGGLGWAMSLFHRGYRVGARYAGDVGPHDAHRLVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWLPR---------AEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQSL 600          
BLAST of mRNA_C-linearis_contig86.16217.1 vs. uniprot
Match: D8LSC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC9_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-20
Identity = 42/52 (80.77%), Postives = 50/52 (96.15%), Query Frame = 0
Query:   54 ITREYYQSGYWAILQTPKHVLNAVILHLVARALRWHLDRLLGLNFAARDQAL 105
            ITREYY+SGYWAILQTPKH+LNAV+LHLVARALRWH+DR+LG+NFAA D+ +
Sbjct:    9 ITREYYKSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEGM 60          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE4.730e-17654.25Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LSC8_ECTSI1.190e-7459.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHV2_9STRA4.070e-4243.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVS8_9STRA4.680e-3741.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSC9_ECTSI3.400e-2080.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..55
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..736
NoneNo IPR availableTMHMMTMhelixcoord: 33..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:250567..255822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16217.1mRNA_C-linearis_contig86.16217.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig86 250409..256166 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig86.16217.1 ID=prot_C-linearis_contig86.16217.1|Name=mRNA_C-linearis_contig86.16217.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=737bp
MALVDTQGFVMAVDRSLFGPQGRRWIERKLPDVVTNLAFISVSAVGALFL
CFHITREYYQSGYWAILQTPKHVLNAVILHLVARALRWHLDRLLGLNFAA
RDQALPDFFAASVQEGATDGRDDGNNGNNNNSNHNKAAVLWPWQSSQNQS
RSTQQEPRVSTSPFAPHGWWGGGGGGGGNNDLDVFRGHGRSHSADGAAVA
SAGGESGSRNAKKKRDGGKTVRRTASSLCLPAAAQQQQQQRGGGEREETR
GRRRSSSSSEHGLAGGGDTEDGGDDDDRSHEHHHPFPDLFGACRPGQNNH
RRGRMPSSPPSTPVATRKEPTRPSSLDRNRAGGGRRGRLSAGRRNLSPET
PHTAAHRWIQEDGGGGGKREPRAAVGAGGAARQGGWTSDDGGAGGHGAGV
RGSRRRRRSLTGSSFFSPPPAAAAATGKREGGRRERGETGGEDEEGEQDG
ETGVGTAMAAAVVSAAAAAGIGGGGGGGDGASRRWKPIDKLSRALGSTRR
RASMRTGGLGRDGAPPGNEPRLNFFTEVDLDELLHSTFFIKMCDDASWLY
VEDHPYVPELNWLLTLWGGYKITPRFQGEVKQNEAHRMLFQCESGRHQGN
IRIRSRATNTFLFFLGVKQPLTWVAWDRDVVGGDWEDLKLEWVGKPQGAD
GVLVGDERGRVVIWSRRINGYVSWNGSRFTHVQGREGATVFMLQRMASSS
SSGGGGGGGGGAGTSMSMSASTSTASRRTRQRRADR*
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